vOTU vOTU-073093

vOTU: vOTU-073093

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-073093
Number of genomes	3
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00006 → vSUBFAM-00781 → vGENUS-00653 → vSUBGEN-01252 → vOTU-073093
Host lineage	Bacteria → Firmicutes → Bacilli → Erysipelotrichales → Coprobacillaceae → Catenibacterium
Host range breadth	Genus
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1516656
Biosample ID	SAMEA40169668
Genome length (bp)	44,108 bps
CheckV completeness	99.90% (High-quality)
CDS count	62
CDS density	91.34%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes → Bacilli → Erysipelotrichales → Coprobacillaceae → Catenibacterium	Total connections	29	Host agreement	82.76
PHIST-predicted host lineage	Bacteria → Firmicutes → Bacilli → Erysipelotrichales → Coprobacillaceae → Catenibacterium → Catenibacterium sp000437715	Total connections	1	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 99.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-1516656_1	K01447	108.1	1.1e-31	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-1516656_1	phrog_1493	129.3	3.2e-38	endolysin	lysis
UniRef90	UHGV-1516656_1	UniRef90_A0A1Q6MQM1	291.0	0	N-acetylmuramoyl-L-alanine amidase domain-containing protein	N/A
eggNOG-mapper	UHGV-1516656_1	1235802.C823_05611	187.0	0	Ami_2	N/A
Pfam	UHGV-1516656_1	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
Pfam	UHGV-1516656_1	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
COG	UHGV-1516656_1	COG5632	N/A	N/A	N-acetylmuramoyl-L-alanine amidase CwlA	N/A
structural_annotation	UHGV-1516656_1	PF01510,PF01471,MF_04111,NF008758,COG5632,COG3409	N/A	N/A	N/A	N/A
PHROG	UHGV-1516656_2	phrog_355	47.9	0.00000000000018	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1516656_2	UniRef90_UPI0018A09237	105.0	9.22e-28	N/A	N/A
eggNOG-mapper	UHGV-1516656_2	397290.C810_05229	104.0	5.1e-28	N/A	N/A
structural_annotation	UHGV-1516656_2	PF14359	N/A	N/A	N/A	N/A
PHROG	UHGV-1516656_3	phrog_29267	160.1	0	N/A	unknown function
structural_annotation	UHGV-1516656_3	PF20164,NF038186,COG5513	N/A	N/A	N/A	N/A
PHROG	UHGV-1516656_4	phrog_28650	68.8	6.7e-20	N/A	unknown function
PHROG	UHGV-1516656_5	phrog_10898	166.2	0	N/A	unknown function
structural_annotation	UHGV-1516656_5	PF13157,PF16408,NF033510,COG4935	N/A	N/A	N/A	N/A
PHROG	UHGV-1516656_6	phrog_10898	301.6	0	N/A	unknown function
UniRef90	UHGV-1516656_6	UniRef90_A0A7U3NJT3	179.0	0	Putative Ig-like domain-containing protein	N/A
eggNOG-mapper	UHGV-1516656_6	717606.PaecuDRAFT_2136	66.2	0.000000000915	S-layer homology domain	N/A
COG	UHGV-1516656_6	COG1520	N/A	N/A	Outer membrane protein assembly factor BamB, contains PQQ-like beta-propeller repeat	N/A
structural_annotation	UHGV-1516656_6	PF19081,PF15418,MF_01905,NF032891,COG3291	N/A	N/A	N/A	N/A
PHROG	UHGV-1516656_7	phrog_199	59.7	3.3e-17	holin	lysis
UniRef90	UHGV-1516656_7	UniRef90_E2NRB7	279.0	0	Toxin secretion/phage lysis holin	N/A
eggNOG-mapper	UHGV-1516656_7	411460.RUMTOR_02100	187.0	0	N/A	N/A
Pfam	UHGV-1516656_7	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-1516656_7	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
structural_annotation	UHGV-1516656_7	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
PHROG	UHGV-1516656_8	phrog_372	216.5	0	tail protein	tail
UniRef90	UHGV-1516656_8	UniRef90_UPI0006C32325	1096.0	0	N/A	N/A
eggNOG-mapper	UHGV-1516656_8	1211844.CBLM010000016_gene1479	203.0	0	N/A	N/A
Pfam	UHGV-1516656_8	PF05895	N/A	N/A	N/A	DUF859
structural_annotation	UHGV-1516656_8	PF05895,MF_04116,NF010681,COG3291	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1516656_9	411465.PEPMIC_00746	89.7	1.41e-17	Prophage endopeptidase tail	N/A
COG	UHGV-1516656_9	COG4926	N/A	N/A	Phage-related protein	N/A
PHROG	UHGV-1516656_10	phrog_30133	112.3	4.2e-33	virion structural protein	head and packaging
UniRef90	UHGV-1516656_10	UniRef90_I7ARM6	293.0	0	N/A	N/A
eggNOG-mapper	UHGV-1516656_10	1504823.CCMM01000008_gene1029	309.0	0	N/A	N/A
structural_annotation	UHGV-1516656_10	PF14874,NF038186	N/A	N/A	N/A	N/A
PHROG	UHGV-1516656_11	phrog_6616	115.8	1.9e-34	tail protein	tail
eggNOG-mapper	UHGV-1516656_11	469596.HMPREF9488_01318	400.0	0	N/A	N/A
structural_annotation	UHGV-1516656_11	PF14594,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-1516656_12	phrog_1194	96.9	1.5e-28	N/A	unknown function
UniRef90	UHGV-1516656_12	UniRef90_G0IA27	85.9	2.68e-19	N/A	N/A
eggNOG-mapper	UHGV-1516656_12	1294142.CINTURNW_1701	105.0	8.53e-28	N/A	N/A
Pfam	UHGV-1516656_12	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-1516656_12	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
UniRef90	UHGV-1516656_13	UniRef90_R5EG59	68.6	0.00000000000298	Cation diffusion facilitator family transporter	N/A
eggNOG-mapper	UHGV-1516656_13	1211844.CBLM010000023_gene980	110.0	1.64e-26	N/A	N/A
PHROG	UHGV-1516656_14	phrog_1535	254.8	0	tail length tape measure protein	tail
UniRef90	UHGV-1516656_14	UniRef90_A8RD17	162.0	2.22e-36	Cation diffusion facilitator family transporter	N/A
eggNOG-mapper	UHGV-1516656_14	428127.EUBDOL_01563	162.0	3.72e-37	homoserine transmembrane transporter activity	N/A
COG	UHGV-1516656_14	COG1280	N/A	N/A	Threonine/homoserine/homoserine lactone efflux protein	N/A
eggNOG-mapper	UHGV-1516656_15	1121333.JMLH01000047_gene1011	102.0	2.36e-26	N/A	N/A
eggNOG-mapper	UHGV-1516656_16	469596.HMPREF9488_01311	57.4	0.00000000327	N/A	N/A
Pfam	UHGV-1516656_16	PF16478	N/A	N/A	N/A	DUF5055
structural_annotation	UHGV-1516656_16	PF16478	N/A	N/A	N/A	N/A
PHROG	UHGV-1516656_17	phrog_158	42.2	0.000000000013	major tail protein	tail
eggNOG-mapper	UHGV-1516656_17	469596.HMPREF9488_01310	219.0	0	N/A	N/A
structural_annotation	UHGV-1516656_17	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1516656_18	1121333.JMLH01000047_gene1014	64.3	0.0000000000307	N/A	N/A
structural_annotation	UHGV-1516656_18	PF06141,TIGR02367,COG3167	N/A	N/A	N/A	N/A
UniRef90	UHGV-1516656_19	UniRef90_A0A7C7ERK4	101.0	3.58e-24	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-1516656_19	397290.C810_01411	59.3	0.0000000107	N/A	N/A
structural_annotation	UHGV-1516656_19	PF17395,TIGR01725,COG5005	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1516656_20	1232453.BAIF02000058_gene1630	65.5	0.00000000000607	N/A	N/A
UniRef90	UHGV-1516656_21	UniRef90_A0A7C7ERG0	107.0	6.35e-28	DNA-packaging protein	N/A
structural_annotation	UHGV-1516656_21	TIGR01560	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1516656_23	428127.EUBDOL_01555	279.0	0	N/A	N/A
structural_annotation	UHGV-1516656_23	PF19821,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1516656_25	phrog_64	195.6	0	portal protein	head and packaging
UniRef90	UHGV-1516656_25	UniRef90_A0A3E3AE79	416.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-1516656_25	1121866.AUGK01000003_gene1429	249.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-1516656_25	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1516656_25	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1516656_26	COG4416	N/A	N/A	N/A	N/A
PHROG	UHGV-1516656_27	phrog_38	205.4	0	terminase large subunit	head and packaging
UniRef90	UHGV-1516656_27	UniRef90_A0A318EQM2	449.0	0	Putative phage terminase large subunit-like protein	N/A
eggNOG-mapper	UHGV-1516656_27	1123263.AUKY01000015_gene1608	488.0	0	chromosome segregation	N/A
COG	UHGV-1516656_27	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1516656_27	PF17289,PF02562,MF_04147,NF033889,COG5362,COG5410	N/A	N/A	N/A	N/A
KOfam	UHGV-1516656_28	K14060	116.7	2.6e-34	pinR; putative DNA-invertase from lambdoid prophage Rac	N/A
PHROG	UHGV-1516656_28	phrog_125	147.2	9.66896e-44	DNA invertase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1516656_28	UniRef90_A0A3E3AEZ4	207.0	0	Recombinase family protein	N/A
eggNOG-mapper	UHGV-1516656_28	641107.CDLVIII_2031	157.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-1516656_28	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-1516656_28	PF02796	N/A	N/A	Helix-turn-helix domain of resolvase	HTH_7
COG	UHGV-1516656_28	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-1516656_28	PF00239,PF02796,NF009949,COG1961	N/A	N/A	N/A	N/A
UniRef90	UHGV-1516656_29	UniRef90_UPI0018AB0909	50.1	0.00000411	helix-turn-helix domain-containing protein	N/A
structural_annotation	UHGV-1516656_29	PF12844,TIGR02612,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-1516656_30	phrog_16683	113.8	9.6e-34	N/A	unknown function
UniRef90	UHGV-1516656_30	UniRef90_A0A1C5VLT5	129.0	1.12e-29	Putative amidoligase enzyme	N/A
eggNOG-mapper	UHGV-1516656_30	411473.RUMCAL_01474	124.0	1.32e-29	N/A	N/A
structural_annotation	UHGV-1516656_30	PF12224,MF_02111,NF010044,COG2170	N/A	N/A	N/A	N/A
UniRef90	UHGV-1516656_31	UniRef90_UPI001E41BE2F	119.0	3.74e-31	class II glutamine amidotransferase	N/A
eggNOG-mapper	UHGV-1516656_31	1401067.HMPREF0872_03875	98.6	2.8e-23	N/A	N/A
PHROG	UHGV-1516656_33	phrog_606	43.2	0.0000000000055	terminase small subunit	head and packaging
eggNOG-mapper	UHGV-1516656_33	931276.Cspa_c57180	51.2	0.00000571	DNA-packaging protein gp3	N/A
Pfam	UHGV-1516656_33	PF16677	N/A	N/A	DNA-packaging protein gp3	GP3_package
KOfam	UHGV-1516656_34	K02316	92.4	5.4e-27	dnaG; DNA primase [EC:2.7.7.101]	N/A
PHROG	UHGV-1516656_34	phrog_864	206.1	0	DNA primase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1516656_34	UniRef90_UPI001C2539AF	514.0	0	N/A	N/A
eggNOG-mapper	UHGV-1516656_34	1219626.HMPREF1639_07360	114.0	3.14e-23	D5 N terminal like	N/A
Pfam	UHGV-1516656_34	PF13155	N/A	N/A	Toprim-like	Toprim_2
Pfam	UHGV-1516656_34	PF19263	N/A	N/A	N/A	DUF5906
NCBIFam	UHGV-1516656_34	TIGR01613.1	N/A	N/A	phage/plasmid primase, P4 family	N/A
COG	UHGV-1516656_34	COG3378	N/A	N/A	DNA primase, phage- or plasmid-associated	N/A
structural_annotation	UHGV-1516656_34	PF04735,MF_00974,MF_04000,NF005477,COG3378,COG0358	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1516656_36	PF15959	N/A	N/A	N/A	N/A
KOfam	UHGV-1516656_40	K07171	82.0	1.1e-23	mazF, ndoA, chpA; mRNA interferase MazF [EC:3.1.-.-]	N/A
PHROG	UHGV-1516656_40	phrog_1936	131.7	4.3e-39	MazF-like growth inhibitor	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1516656_40	UniRef90_A0A1C5MWG4	142.0	2.53e-40	mRNA interferase MazF4	N/A
eggNOG-mapper	UHGV-1516656_40	411461.DORFOR_01157	115.0	6.19e-30	N/A	N/A
Pfam	UHGV-1516656_40	PF02452	N/A	N/A	PemK-like, MazF-like toxin of type II toxin-antitoxin system	PemK_toxin
COG	UHGV-1516656_40	COG2337	N/A	N/A	mRNA-degrading endonuclease MazF, toxin component of the MazEF toxin-antitoxin module	N/A
structural_annotation	UHGV-1516656_40	PF02452,NF007386,COG2337	N/A	N/A	N/A	N/A
PHROG	UHGV-1516656_47	phrog_22292	103.3	1.6e-30	N/A	unknown function
eggNOG-mapper	UHGV-1516656_47	1232446.BAIE02000002_gene811	75.5	0.00000000000000399	N/A	N/A
PHROG	UHGV-1516656_49	phrog_3878	42.1	0.000000000014	N/A	unknown function
KOfam	UHGV-1516656_50	K00390	67.0	7.4e-20	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	N/A
PHROG	UHGV-1516656_50	phrog_424	107.0	1.7e-31	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1516656_50	UniRef90_A0A843HLZ2	317.0	0	Phosphoadenosine phosphosulfate reductase family protein	N/A
eggNOG-mapper	UHGV-1516656_50	1410650.JHWL01000037_gene595	254.0	0	Phosphoadenosine phosphosulfate reductase family	N/A
Pfam	UHGV-1516656_50	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-1516656_50	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-1516656_50	PF01507,MF_00063,NF006327,COG0175	N/A	N/A	N/A	N/A
PHROG	UHGV-1516656_51	phrog_6721	277.5	0	N/A	unknown function
eggNOG-mapper	UHGV-1516656_51	665956.HMPREF1032_00655	250.0	0	N/A	N/A
structural_annotation	UHGV-1516656_51	PF02511,MF_01408,TIGR02170,COG1351	N/A	N/A	N/A	N/A
PHROG	UHGV-1516656_53	phrog_236	100.4	3.3e-29	nucleotide kinase	other
UniRef90	UHGV-1516656_53	UniRef90_A0A8D9PGN7	132.0	4.9e-38	Nucelotide kinase	N/A
eggNOG-mapper	UHGV-1516656_53	1123263.AUKY01000015_gene1590	89.0	2.41e-22	N/A	N/A
Pfam	UHGV-1516656_53	PF11753	N/A	N/A	N/A	DUF3310
structural_annotation	UHGV-1516656_53	PF11753	N/A	N/A	N/A	N/A
PHROG	UHGV-1516656_54	phrog_93	46.9	0.00000000000031	endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1516656_54	UniRef90_A0A3E3AEG4	97.4	4.84e-24	VRR-NUC domain-containing protein	N/A
eggNOG-mapper	UHGV-1516656_54	1231377.C426_0594	51.6	0.000000628	VRR_NUC	N/A
Pfam	UHGV-1516656_54	PF08774	N/A	N/A	VRR-NUC domain	VRR_NUC
KOfam	UHGV-1516656_55	K19789	234.5	0	radD; DNA repair protein RadD	N/A
PHROG	UHGV-1516656_55	phrog_16	204.4	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1516656_55	UniRef90_A0A374HMN2	330.0	0	ATP-dependent helicase	N/A
eggNOG-mapper	UHGV-1516656_55	1410670.JHXF01000015_gene2270	306.0	0	helicase	N/A
PADLOC	UHGV-1516656_55	mREase_IV_00005	101.6	7.9e-30	Type IV methyl-directed restriction enzyme	RM
Pfam	UHGV-1516656_55	PF04851	N/A	N/A	Type III restriction enzyme, res subunit	ResIII
Pfam	UHGV-1516656_55	PF00271	N/A	N/A	Helicase conserved C-terminal domain	Helicase_C
COG	UHGV-1516656_55	COG1061	N/A	N/A	Superfamily II DNA or RNA helicase	N/A
structural_annotation	UHGV-1516656_55	PF04851,PF00271,MF_01489,TIGR04095,COG1061	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1516656_56	1539298.JO41_12690	57.4	0.0000000657	N/A	N/A
Pfam	UHGV-1516656_56	PF05037	N/A	N/A	N/A	DUF669
structural_annotation	UHGV-1516656_56	PF05037	N/A	N/A	N/A	N/A
PHROG	UHGV-1516656_57	phrog_124	139.1	3.00004e-41	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1516656_57	UniRef90_A0A7X2IW81	199.0	0	AAA family ATPase	N/A
eggNOG-mapper	UHGV-1516656_57	1227360.C176_12573	194.0	0	AAA domain	N/A
Pfam	UHGV-1516656_57	PF13479	N/A	N/A	AAA domain	AAA_24
NCBIFam	UHGV-1516656_57	TIGR01618.1	N/A	N/A	phage nucleotide-binding protein	N/A
structural_annotation	UHGV-1516656_57	PF13479,MF_00350,TIGR01618,COG1066	N/A	N/A	N/A	N/A
PHROG	UHGV-1516656_58	phrog_69	47.0	0.00000000000039	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1516656_58	UniRef90_A0A645E2H1	181.0	0	PDDEXK_1 domain-containing protein	N/A
eggNOG-mapper	UHGV-1516656_58	1382304.JNIL01000001_gene3509	60.1	0.000000129	Belongs to the helicase family. UvrD subfamily	N/A
Pfam	UHGV-1516656_58	PF12705	N/A	N/A	PD-(D/E)XK nuclease superfamily	PDDEXK_1
COG	UHGV-1516656_58	COG2887	N/A	N/A	RecB family exonuclease	N/A
structural_annotation	UHGV-1516656_58	PF12684,TIGR01896,COG4343	N/A	N/A	N/A	N/A
UniRef90	UHGV-1516656_59	UniRef90_A0A417IKZ6	90.9	3.17e-22	DNA-binding protein	N/A
structural_annotation	UHGV-1516656_59	PF12728,TIGR01764,COG3311	N/A	N/A	N/A	N/A
UniRef90	UHGV-1516656_61	UniRef90_A0A3C1N2P3	65.1	0.00000000000737	HTH cro/C1-type domain-containing protein	N/A
Pfam	UHGV-1516656_61	PF13560	N/A	N/A	Helix-turn-helix domain	HTH_31
KOfam	UHGV-1516656_62	K14059	96.4	4.6e-28	int; integrase	N/A
PHROG	UHGV-1516656_62	phrog_1	123.6	1.9e-36	integrase	integration and excision
UniRef90	UHGV-1516656_62	UniRef90_UPI001EE781EB	540.0	0	site-specific integrase	N/A
eggNOG-mapper	UHGV-1516656_62	1504823.CCMM01000008_gene1083	454.0	0	DNA integration	N/A
Pfam	UHGV-1516656_62	PF14657	N/A	N/A	Arm DNA-binding domain	Arm-DNA-bind_4
Pfam	UHGV-1516656_62	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1516656_62	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1516656_62	PF00589,PF13495,MF_02055,TIGR02225,COG4974	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1516656	Yes	44,108	38	100	1
UHGV-1378986	No	22,082	39	51	1
UHGV-1569826	No	21,341	39	50	1