vOTU vOTU-073104

vOTU: vOTU-073104

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-073104
Number of genomes	11
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00004 → vSUBFAM-00020 → vGENUS-00177 → vSUBGEN-30431 → vOTU-073104
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-170 → CAG-170 sp000432135
Host range breadth	Species
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0047660
Biosample ID	SAMEA2043044
Genome length (bp)	42,260 bps
CheckV completeness	99.90% (High-quality)
CDS count	81
CDS density	94.59%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-170 → CAG-170 sp000432135	Total connections	924	Host agreement	91.34
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-170	Total connections	14	Host agreement	78.57

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 99.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
structural_annotation	UHGV-0047660_2	PF16509,MF_00245,NF001066,COG2739	N/A	N/A	N/A	N/A
UniRef90	UHGV-0047660_3	UniRef90_UPI00164EA432	224.0	0	SH3 domain-containing protein	N/A
eggNOG-mapper	UHGV-0047660_3	525254.HMPREF0072_1273	214.0	0	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase	N/A
COG	UHGV-0047660_3	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
structural_annotation	UHGV-0047660_3	NF033743	N/A	N/A	N/A	N/A
PHROG	UHGV-0047660_4	phrog_6918	96.4	1.9e-28	holin	lysis
UniRef90	UHGV-0047660_4	UniRef90_A0A316QCY7	103.0	8.58e-27	Holin	N/A
eggNOG-mapper	UHGV-0047660_4	1297617.JPJD01000020_gene301	102.0	6e-27	Bacteriophage holin of superfamily 6 (Holin_LLH)	N/A
Pfam	UHGV-0047660_4	PF09682	N/A	N/A	Bacteriophage holin of superfamily 6 (Holin_LLH)	Phage_holin_6_1
structural_annotation	UHGV-0047660_4	PF09682,TIGR01673	N/A	N/A	N/A	N/A
Pfam	UHGV-0047660_7	PF07484	N/A	N/A	Phage Tail Collar Domain	Collar
structural_annotation	UHGV-0047660_7	PF07484	N/A	N/A	N/A	N/A
Pfam	UHGV-0047660_8	PF07484	N/A	N/A	Phage Tail Collar Domain	Collar
structural_annotation	UHGV-0047660_8	PF20055,MF_03008,NF010730,COG3940	N/A	N/A	N/A	N/A
PHROG	UHGV-0047660_9	phrog_18725	101.4	8.3e-30	N/A	unknown function
eggNOG-mapper	UHGV-0047660_9	693746.OBV_18220	133.0	1.1e-37	N/A	N/A
PHROG	UHGV-0047660_10	phrog_13879	166.6	0	N/A	unknown function
eggNOG-mapper	UHGV-0047660_10	1122919.KB905559_gene1344	155.0	1.68e-38	N/A	N/A
structural_annotation	UHGV-0047660_10	PF14594,PF03256,NF033848,COG4379,COG5156	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0047660_11	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0047660_12	phrog_6900	269.0	0	tail length tape measure protein	tail
eggNOG-mapper	UHGV-0047660_12	1123312.KB904569_gene357	323.0	0	Phage tail tape measure protein TP901	N/A
COG	UHGV-0047660_12	COG5412	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0047660_12	MF_04138,COG5281	N/A	N/A	N/A	N/A
PHROG	UHGV-0047660_14	phrog_18646	63.2	4.6e-18	N/A	unknown function
UniRef90	UHGV-0047660_14	UniRef90_B6CXF0	72.8	0.0000000000000373	Peptidase-colicin	N/A
PHROG	UHGV-0047660_15	phrog_885	76.8	2.7e-22	major tail protein	tail
UniRef90	UHGV-0047660_15	UniRef90_A0A843J9F0	216.0	0	Ig-like domain-containing protein	N/A
eggNOG-mapper	UHGV-0047660_15	1504822.CCNO01000012_gene492	245.0	0	N/A	N/A
structural_annotation	UHGV-0047660_15	PF06488,TIGR01603,COG5437	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0047660_16	PF11367	N/A	N/A	N/A	N/A
PHROG	UHGV-0047660_17	phrog_17977	80.4	1.6e-23	N/A	unknown function
UniRef90	UHGV-0047660_17	UniRef90_UPI00141211AB	115.0	7.02e-31	head-tail adaptor protein	N/A
structural_annotation	UHGV-0047660_17	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0047660_19	phrog_544	132.4	2.2e-39	major head protein	head and packaging
UniRef90	UHGV-0047660_19	UniRef90_A0A1C6B5R0	594.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0047660_19	1232453.BAIF02000011_gene3359	365.0	0	N/A	N/A
Pfam	UHGV-0047660_19	PF18316	N/A	N/A	S-layer protein SbsC C-terminal domain	S-l_SbsC_C
structural_annotation	UHGV-0047660_19	PF03864,PF18316,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0047660_20	phrog_194	46.8	0.00000000000056	head scaffolding protein	head and packaging
UniRef90	UHGV-0047660_20	UniRef90_A0A6B9SU02	151.0	9.89317e-43	Fibronectin autolysin	N/A
eggNOG-mapper	UHGV-0047660_20	476272.RUMHYD_01775	58.5	0.0000000659	COG NOG36366 non supervised orthologous group	N/A
structural_annotation	UHGV-0047660_20	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-0047660_21	phrog_5	81.8	1.2e-23	tail completion or Neck1 protein	connector
UniRef90	UHGV-0047660_21	UniRef90_UPI0018AA0B5A	195.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0047660_21	1123309.AQYB01000018_gene814	99.4	5.92e-25	Bacteriophage HK97-gp10, putative tail-component	N/A
Pfam	UHGV-0047660_21	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
NCBIFam	UHGV-0047660_21	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
structural_annotation	UHGV-0047660_21	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-0047660_22	phrog_595	121.1	1.3e-35	head maturation protease	head and packaging
UniRef90	UHGV-0047660_22	UniRef90_A0A810PSD3	449.0	0	Phage_Mu_F domain-containing protein	N/A
eggNOG-mapper	UHGV-0047660_22	1504822.CCNO01000013_gene286	218.0	0	cell adhesion	N/A
Pfam	UHGV-0047660_22	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
NCBIFam	UHGV-0047660_22	TIGR01641.1	N/A	N/A	minor capsid protein	N/A
COG	UHGV-0047660_22	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0047660_22	PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A
KOfam	UHGV-0047660_23	K18454	45.7	0.00000000000086	deaA; chitin disaccharide deacetylase [EC:3.5.1.105]	N/A
PHROG	UHGV-0047660_23	phrog_30034	65.8	8.9e-19	N/A	unknown function
UniRef90	UHGV-0047660_23	UniRef90_A0A1C5VT90	149.0	6.86636e-44	Chitinase A1	N/A
eggNOG-mapper	UHGV-0047660_23	1235796.C815_00903	134.0	1.21e-37	N/A	N/A
Pfam	UHGV-0047660_23	PF02839	N/A	N/A	Carbohydrate-binding module family 5/12	CBM_5_12
structural_annotation	UHGV-0047660_23	PF14600	N/A	N/A	N/A	N/A
PHROG	UHGV-0047660_25	phrog_29409	44.5	0.0000000000015	N/A	unknown function
PHROG	UHGV-0047660_26	phrog_37900	334.5	0	N/A	unknown function
UniRef90	UHGV-0047660_26	UniRef90_UPI001C3EA4DF	344.0	0	N/A	N/A
eggNOG-mapper	UHGV-0047660_26	552398.HMPREF0866_03098	254.0	0	N/A	N/A
Pfam	UHGV-0047660_26	PF19789	N/A	N/A	N/A	DUF6273
COG	UHGV-0047660_26	COG3827	N/A	N/A	Cell pole-organizing protein PopZ	N/A
structural_annotation	UHGV-0047660_26	PF19789	N/A	N/A	N/A	N/A
PHROG	UHGV-0047660_28	phrog_10898	42.0	0.000000000016	N/A	unknown function
structural_annotation	UHGV-0047660_28	PF16408,NF033510	N/A	N/A	N/A	N/A
PHROG	UHGV-0047660_29	phrog_10898	289.0	0	N/A	unknown function
UniRef90	UHGV-0047660_29	UniRef90_A0A7U3NJT3	191.0	0	Putative Ig-like domain-containing protein	N/A
eggNOG-mapper	UHGV-0047660_29	717606.PaecuDRAFT_2136	65.1	0.00000000231	S-layer homology domain	N/A
COG	UHGV-0047660_29	COG1520	N/A	N/A	Outer membrane protein assembly factor BamB, contains PQQ-like beta-propeller repeat	N/A
structural_annotation	UHGV-0047660_29	PF19081,PF15418,MF_01905,NF032891,COG3291	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0047660_32	PF10651,NF038186	N/A	N/A	N/A	N/A
PHROG	UHGV-0047660_33	phrog_64	156.2	0	portal protein	head and packaging
UniRef90	UHGV-0047660_33	UniRef90_UPI001AA0B7FF	496.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-0047660_33	673376.F2VHW1_9CAUD	220.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0047660_33	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0047660_33	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
KOfam	UHGV-0047660_34	K06909	122.4	4.8e-36	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0047660_34	phrog_10250	155.4	0	N/A	unknown function
UniRef90	UHGV-0047660_34	UniRef90_A0A3D3Y0N9	622.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0047660_34	1226322.HMPREF1545_00043	584.0	0	Phage terminase large subunit	N/A
Pfam	UHGV-0047660_34	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
Pfam	UHGV-0047660_34	PF17289	N/A	N/A	Terminase RNaseH-like domain	Terminase_6C
NCBIFam	UHGV-0047660_34	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0047660_34	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0047660_34	PF03237,PF17289,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
KOfam	UHGV-0047660_37	K03497	50.9	0.00000000000001	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	N/A
PHROG	UHGV-0047660_37	phrog_21498	290.9	0	N/A	unknown function
UniRef90	UHGV-0047660_37	UniRef90_A0A7X2P836	286.0	0	ParB domain-containing protein	N/A
eggNOG-mapper	UHGV-0047660_37	469378.Ccur_02830	282.0	0	DNA binding	N/A
PADLOC	UHGV-0047660_37	MTase_II_00015	82.3	6.9e-24	Type II methyltransferase	RM
Pfam	UHGV-0047660_37	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
COG	UHGV-0047660_37	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-0047660_37	PF02195,PF05869,MF_02015,TIGR00180,TIGR01712,COG1475	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0047660_38	742738.HMPREF9460_02503	91.3	9.69e-23	N/A	N/A
structural_annotation	UHGV-0047660_38	PF06530,MF_00674,TIGR01636,COG1342	N/A	N/A	N/A	N/A
PHROG	UHGV-0047660_41	phrog_1770	59.4	7.6e-17	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0047660_41	536233.CLO_1822	154.0	1.4013e-45	N/A	N/A
structural_annotation	UHGV-0047660_41	PF02075,MF_00034,NF000711,COG0817	N/A	N/A	N/A	N/A
Pfam	UHGV-0047660_45	PF14354	N/A	N/A	Restriction alleviation protein Lar	Lar_restr_allev
structural_annotation	UHGV-0047660_45	PF14354,TIGR03655	N/A	N/A	N/A	N/A
PHROG	UHGV-0047660_47	phrog_38832	41.3	0.000000000000001	N/A	unknown function
eggNOG-mapper	UHGV-0047660_47	1232443.BAIA02000078_gene48	52.4	0.000000857	N/A	N/A
PHROG	UHGV-0047660_48	phrog_3136	77.5	2.8e-32	N/A	unknown function
UniRef90	UHGV-0047660_48	UniRef90_A0A3D0HBD2	99.0	9.31e-24	ASCH domain-containing protein	N/A
eggNOG-mapper	UHGV-0047660_48	553218.CAMRE0001_1930	49.3	0.00000772	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome	N/A
Pfam	UHGV-0047660_48	PF04266	N/A	N/A	ASCH domain	ASCH
COG	UHGV-0047660_48	COG4933	N/A	N/A	Predicted transcriptional regulator, contains an HTH and PUA-like domains	N/A
structural_annotation	UHGV-0047660_48	PF12961,NF002008,COG4933	N/A	N/A	N/A	N/A
PHROG	UHGV-0047660_49	phrog_424	97.6	1.6e-28	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0047660_49	UniRef90_A0A1Q6JI14	358.0	0	Phosphoadenosine phosphosulfate reductase	N/A
eggNOG-mapper	UHGV-0047660_49	1410628.JNKS01000054_gene544	305.0	0	N/A	N/A
Pfam	UHGV-0047660_49	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-0047660_49	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-0047660_49	PF01507,MF_01161,NF006327,COG0175	N/A	N/A	N/A	N/A
PHROG	UHGV-0047660_51	phrog_16304	58.4	1.5e-16	N/A	unknown function
UniRef90	UHGV-0047660_51	UniRef90_A0A3D3Y5P0	219.0	0	N/A	N/A
eggNOG-mapper	UHGV-0047660_51	1410650.JHWL01000003_gene2848	54.7	0.00000573	N/A	N/A
Pfam	UHGV-0047660_51	PF19808	N/A	N/A	N/A	DUF6291
structural_annotation	UHGV-0047660_51	PF19808	N/A	N/A	N/A	N/A
PHROG	UHGV-0047660_52	phrog_378	99.1	5.5e-29	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0047660_52	UniRef90_UPI001E43F9BA	71.6	0.000000000000791	N/A	N/A
eggNOG-mapper	UHGV-0047660_52	1423732.BALS01000134_gene393	65.9	0.0000000000313	N/A	N/A
structural_annotation	UHGV-0047660_52	PF05037,NF004948	N/A	N/A	N/A	N/A
UniRef90	UHGV-0047660_53	UniRef90_A0A2Z4QA33	241.0	0	PD-(D/E)XK nuclease	N/A
eggNOG-mapper	UHGV-0047660_53	718252.FP2_01050	128.0	1.84e-34	N/A	N/A
structural_annotation	UHGV-0047660_53	PF10926,MF_03030,TIGR04328,COG4343	N/A	N/A	N/A	N/A
PHROG	UHGV-0047660_54	phrog_124	116.9	1.8e-34	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0047660_54	UniRef90_A0A2Z4QBI4	392.0	0	AAA domain protein	N/A
eggNOG-mapper	UHGV-0047660_54	445972.ANACOL_00146	221.0	0	AAA domain	N/A
Pfam	UHGV-0047660_54	PF13479	N/A	N/A	AAA domain	AAA_24
COG	UHGV-0047660_54	COG1100	N/A	N/A	GTPase SAR1 family domain	N/A
structural_annotation	UHGV-0047660_54	PF13479,MF_00350,TIGR01618,COG0468	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0047660_59	PF10548	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0047660_60	1235835.C814_03153	74.7	5.02e-17	N/A	N/A
structural_annotation	UHGV-0047660_60	PF09035,NF040990	N/A	N/A	N/A	N/A
UniRef90	UHGV-0047660_61	UniRef90_A0A1C7FQD9	87.4	3.29e-21	Transcriptional regulator	N/A
Pfam	UHGV-0047660_61	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0047660_61	PF13560,NF041951,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-0047660_62	phrog_8	45.1	0.0000000000021	transcriptional regulator	transcription regulation
UniRef90	UHGV-0047660_62	UniRef90_UPI001E54DE4F	77.0	4.45e-16	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0047660_62	1378168.N510_01712	67.8	0.00000000000448	N/A	N/A
Pfam	UHGV-0047660_62	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0047660_62	PF12844,NF041951,COG1396	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0047660_63	PF13601,TIGR04176,COG1846	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0047660_66	1280682.AUKA01000018_gene2337	144.0	2.26e-38	N/A	N/A
Pfam	UHGV-0047660_66	PF12773	N/A	N/A	Double zinc ribbon	DZR
structural_annotation	UHGV-0047660_66	PF02805	N/A	N/A	N/A	N/A
Pfam	UHGV-0047660_68	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0047660_68	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0047660_68	PF12844	N/A	N/A	N/A	N/A
KOfam	UHGV-0047660_69	K14059	130.6	2.1e-38	int; integrase	N/A
PHROG	UHGV-0047660_69	phrog_1	143.4	1.99965e-42	integrase	integration and excision
UniRef90	UHGV-0047660_69	UniRef90_UPI00195CC1EE	379.0	0	tyrosine-type recombinase/integrase	N/A
eggNOG-mapper	UHGV-0047660_69	1235835.C814_03141	196.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0047660_69	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0047660_69	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0047660_69	PF00589,MF_01807,TIGR02224,COG4973	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0047660_70	1226322.HMPREF1545_00079	112.0	1.71e-30	N/A	N/A
structural_annotation	UHGV-0047660_71	PF12510	N/A	N/A	N/A	N/A
PHROG	UHGV-0047660_72	phrog_20016	195.4	0	N/A	unknown function
UniRef90	UHGV-0047660_72	UniRef90_A0A285PT46	187.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-0047660_72	1226322.HMPREF1545_00077	169.0	0	N/A	N/A
structural_annotation	UHGV-0047660_72	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-0047660_73	phrog_16490	125.1	1.1e-37	N/A	unknown function
eggNOG-mapper	UHGV-0047660_73	1408437.JNJN01000043_gene803	133.0	1.89e-35	N/A	N/A
PHROG	UHGV-0047660_74	phrog_22984	78.5	2.8e-23	N/A	unknown function
PHROG	UHGV-0047660_75	phrog_21718	88.3	6.5e-26	N/A	unknown function
eggNOG-mapper	UHGV-0047660_75	397290.C810_05210	63.9	0.000000000157	N/A	N/A
PHROG	UHGV-0047660_76	phrog_3754	95.1	7.3e-28	N/A	unknown function
eggNOG-mapper	UHGV-0047660_76	476272.RUMHYD_01764	164.0	0	N/A	N/A
eggNOG-mapper	UHGV-0047660_77	1384065.JAGS01000001_gene2489	52.4	0.0000000214	N/A	N/A
structural_annotation	UHGV-0047660_77	PF10723	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0047660	Yes	42,260	54	100	1
UHGV-1391893	No	42,267	54	100	1
UHGV-1385605	No	42,260	54	100	1
UHGV-1460231	No	35,469	53	85	1
UHGV-1502840	No	35,238	53	85	1
UHGV-1554282	No	24,344	54	59	1
UHGV-0049080	No	24,004	54	58	1
UHGV-1734302	No	17,844	53	42	1
UHGV-1811394	No	16,037	54	39	1
UHGV-1737861	No	13,314	54	32	1
UHGV-1548553	No	10,071	55	24	1