vOTU vOTU-073148

vOTU: vOTU-073148

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-073148
Number of genomes	4
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00005 → vSUBFAM-00160 → vGENUS-02019 → vSUBGEN-19874 → vOTU-073148
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → ER4
Host range breadth	Genus
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1415147
Biosample ID	SAMEA2338828
Genome length (bp)	43,488 bps
CheckV completeness	99.90% (High-quality)
CDS count	58
CDS density	94.34%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → ER4	Total connections	115	Host agreement	73.91
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → ER4 → ER4 sp003522105	Total connections	4	Host agreement	75

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 99.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1415147_1	phrog_37900	67.4	1.5e-19	N/A	unknown function
eggNOG-mapper	UHGV-1415147_1	552398.HMPREF0866_03098	63.5	0.00000000135	N/A	N/A
COG	UHGV-1415147_1	COG3827	N/A	N/A	Cell pole-organizing protein PopZ	N/A
KOfam	UHGV-1415147_2	K16628	126.6	7.2e-38	COL7A; collagen type VII alpha	N/A
PHROG	UHGV-1415147_2	phrog_6320	88.8	1.6e-39	tail fiber protein	tail
UniRef90	UHGV-1415147_2	UniRef90_UPI00068BE71D	271.0	0	collagen-like protein	N/A
eggNOG-mapper	UHGV-1415147_2	1519439.JPJG01000060_gene1892	271.0	0	Collagen triple helix repeat (20 copies)	N/A
Pfam	UHGV-1415147_2	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
COG	UHGV-1415147_2	COG3064	N/A	N/A	Membrane protein TolA involved in colicin uptake	N/A
structural_annotation	UHGV-1415147_2	PF10651,NF033814	N/A	N/A	N/A	N/A
PHROG	UHGV-1415147_3	phrog_15239	78.5	5.5e-23	N/A	unknown function
eggNOG-mapper	UHGV-1415147_3	1449126.JQKL01000003_gene1694	51.2	0.000000881	N/A	N/A
PHROG	UHGV-1415147_4	phrog_1357	256.8	0	major head protein	head and packaging
UniRef90	UHGV-1415147_4	UniRef90_A0A8D9UH64	503.0	0	Major capsid protein	N/A
eggNOG-mapper	UHGV-1415147_4	1449126.JQKL01000003_gene1695	449.0	0	N/A	N/A
NCBIFam	UHGV-1415147_4	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-1415147_4	PF13252,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1415147_5	phrog_13908	264.9	0	N/A	unknown function
eggNOG-mapper	UHGV-1415147_5	1410650.JHWL01000003_gene2831	103.0	1.71e-22	N/A	N/A
structural_annotation	UHGV-1415147_6	NF011128,COG2868	N/A	N/A	N/A	N/A
PHROG	UHGV-1415147_7	phrog_156	317.5	0	portal protein	head and packaging
UniRef90	UHGV-1415147_7	UniRef90_A0A8D9UH10	689.0	0	Portal protein	N/A
eggNOG-mapper	UHGV-1415147_7	748224.HMPREF9436_01396	488.0	0	N/A	N/A
structural_annotation	UHGV-1415147_7	PF16510,MF_04120,TIGR01538,COG4383	N/A	N/A	N/A	N/A
KOfam	UHGV-1415147_8	K06909	104.6	1e-30	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1415147_8	phrog_979	175.3	0	terminase large subunit	head and packaging
UniRef90	UHGV-1415147_8	UniRef90_A0A1Y4WJ48	721.0	0	Terminase-like family protein	N/A
eggNOG-mapper	UHGV-1415147_8	718252.FP2_29190	584.0	0	Terminase-like family	N/A
Pfam	UHGV-1415147_8	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-1415147_8	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1415147_8	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1415147_9	phrog_606	83.8	1.8e-24	terminase small subunit	head and packaging
UniRef90	UHGV-1415147_9	UniRef90_UPI00195648BB	170.0	0	DNA-packaging protein	N/A
eggNOG-mapper	UHGV-1415147_9	397290.C810_05185	150.0	2.66247e-44	DNA-packaging protein gp3	N/A
Pfam	UHGV-1415147_9	PF16677	N/A	N/A	DNA-packaging protein gp3	GP3_package
structural_annotation	UHGV-1415147_9	PF16677	N/A	N/A	N/A	N/A
PHROG	UHGV-1415147_13	phrog_22543	51.1	0.000000000000023	N/A	unknown function
PHROG	UHGV-1415147_14	phrog_3136	133.5	7.1e-40	N/A	unknown function
UniRef90	UHGV-1415147_14	UniRef90_UPI001CBCD733	123.0	3.29e-32	ASCH domain-containing protein	N/A
eggNOG-mapper	UHGV-1415147_14	394503.Ccel_3165	59.3	0.00000000815	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome	N/A
COG	UHGV-1415147_14	COG4933	N/A	N/A	Predicted transcriptional regulator, contains an HTH and PUA-like domains	N/A
structural_annotation	UHGV-1415147_14	PF08819,MF_00684,NF008917,COG4933	N/A	N/A	N/A	N/A
PHROG	UHGV-1415147_15	phrog_38832	41.2	2e-17	N/A	unknown function
eggNOG-mapper	UHGV-1415147_15	665956.HMPREF1032_03087	70.9	0.000000000000124	N/A	N/A
structural_annotation	UHGV-1415147_15	PF11717,TIGR02450	N/A	N/A	N/A	N/A
PHROG	UHGV-1415147_18	phrog_757	121.5	4.6e-36	DNA methyltransferase	other
UniRef90	UHGV-1415147_18	UniRef90_A0A8D9PDD1	419.0	0	DNA (Cytosine 5) methyltransferase	N/A
eggNOG-mapper	UHGV-1415147_18	622312.ROSEINA2194_01264	373.0	0	C-5 cytosine-specific DNA methylase	N/A
COG	UHGV-1415147_18	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-1415147_18	PF00145,TIGR00675,COG0270	N/A	N/A	N/A	N/A
Pfam	UHGV-1415147_19	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1415147_19	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-1415147_19	PF01381,NF041951,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-1415147_20	K00571	103.2	2.8e-30	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	N/A
PHROG	UHGV-1415147_20	phrog_23224	199.2	0	DNA methyltransferase	other
UniRef90	UHGV-1415147_20	UniRef90_A0A1Q6T6B8	365.0	0	Methyltransferase	N/A
eggNOG-mapper	UHGV-1415147_20	718252.FP2_06750	364.0	0	DNA methylase	N/A
PADLOC	UHGV-1415147_20	MTase_II_00172	90.3	5.3e-28	Type II methyltransferase	RM
Pfam	UHGV-1415147_20	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-1415147_20	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-1415147_20	PF01555,NF010253,COG0863	N/A	N/A	N/A	N/A
PHROG	UHGV-1415147_23	phrog_190	113.5	1.6e-33	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1415147_23	UniRef90_UPI001583F66B	105.0	1.37e-26	N/A	N/A
eggNOG-mapper	UHGV-1415147_23	1226322.HMPREF1545_00295	126.0	5.55e-35	N/A	N/A
Pfam	UHGV-1415147_23	PF06356	N/A	N/A	N/A	DUF1064
structural_annotation	UHGV-1415147_23	PF06356	N/A	N/A	N/A	N/A
KOfam	UHGV-1415147_26	K02315	176.8	0	dnaC; DNA replication protein DnaC	N/A
PHROG	UHGV-1415147_26	phrog_50	155.3	0	DnaC-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1415147_26	UniRef90_UPI00137A9A0F	282.0	0	ATP-binding protein	N/A
eggNOG-mapper	UHGV-1415147_26	203119.Cthe_2467	258.0	0	IstB-like ATP binding protein	N/A
Pfam	UHGV-1415147_26	PF01695	N/A	N/A	IstB-like ATP binding protein	IstB_IS21
NCBIFam	UHGV-1415147_26	NF005992.0	N/A	N/A	hypothetical protein	N/A
COG	UHGV-1415147_26	COG1484	N/A	N/A	DNA replication protein DnaC	N/A
structural_annotation	UHGV-1415147_26	PF01695,MF_01919,NF005992,COG1484	N/A	N/A	N/A	N/A
PHROG	UHGV-1415147_27	phrog_2562	154.3	1.4013e-45	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1415147_27	UniRef90_A0A3A6E2X3	245.0	0	N/A	N/A
eggNOG-mapper	UHGV-1415147_27	445971.ANASTE_00700	165.0	0	N/A	N/A
Pfam	UHGV-1415147_27	PF14297	N/A	N/A	Lin1244/Lin1753-like, N-terminal	Lin1244_N
COG	UHGV-1415147_27	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-1415147_27	PF14297	N/A	N/A	N/A	N/A
KOfam	UHGV-1415147_28	K03111	126.0	4.3e-37	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1415147_28	phrog_44	120.8	1.2e-35	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1415147_28	UniRef90_R5SNS5	147.0	9.68297e-43	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1415147_28	693746.OBV_12860	140.0	4.63998e-41	Single-strand binding protein family	N/A
Pfam	UHGV-1415147_28	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1415147_28	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1415147_28	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1415147_28	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1415147_28	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
KOfam	UHGV-1415147_29	K07455	166.8	0	recT; recombination protein RecT	N/A
PHROG	UHGV-1415147_29	phrog_148	171.7	0	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1415147_29	UniRef90_UPI0018C50A8E	323.0	0	recombinase RecT	N/A
eggNOG-mapper	UHGV-1415147_29	1196028.ALEF01000043_gene487	216.0	0	RecT family	N/A
Pfam	UHGV-1415147_29	PF03837	N/A	N/A	RecT family	RecT
NCBIFam	UHGV-1415147_29	TIGR00616.1	N/A	N/A	recombinase, phage RecT family	N/A
COG	UHGV-1415147_29	COG3723	N/A	N/A	Recombinational DNA repair protein RecT	N/A
structural_annotation	UHGV-1415147_29	PF03837,TIGR00616,COG3723	N/A	N/A	N/A	N/A
PHROG	UHGV-1415147_30	phrog_434	285.9	0	RecE-like recombination exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1415147_30	UniRef90_U2SK35	412.0	0	YqaJ viral recombinase family protein	N/A
eggNOG-mapper	UHGV-1415147_30	1226322.HMPREF1545_00014	412.0	0	YqaJ viral recombinase family	N/A
Pfam	UHGV-1415147_30	PF09588	N/A	N/A	YqaJ-like viral recombinase domain	YqaJ
NCBIFam	UHGV-1415147_30	TIGR03033.1	N/A	N/A	putative phage-type endonuclease	N/A
COG	UHGV-1415147_30	COG5377	N/A	N/A	Phage-related protein, predicted endonuclease	N/A
structural_annotation	UHGV-1415147_30	PF09588,MF_03030,TIGR03033,COG5377	N/A	N/A	N/A	N/A
PHROG	UHGV-1415147_32	phrog_22529	93.3	1.4e-27	N/A	unknown function
UniRef90	UHGV-1415147_32	UniRef90_A0A352RPR8	141.0	1.14e-39	3D domain-containing protein	N/A
eggNOG-mapper	UHGV-1415147_32	1304866.K413DRAFT_1950	105.0	1.42e-25	3D domain protein	N/A
Pfam	UHGV-1415147_32	PF06725	N/A	N/A	3D domain	3D
COG	UHGV-1415147_32	COG3584	N/A	N/A	3D (Asp-Asp-Asp) domain, usually in lytic transglycosylases	N/A
structural_annotation	UHGV-1415147_32	PF06725,MF_02071,NF040670,COG3584	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1415147_34	PF11112,COG3311	N/A	N/A	N/A	N/A
KOfam	UHGV-1415147_36	K07741	133.2	4.3e-39	antB; anti-repressor protein	N/A
PHROG	UHGV-1415147_36	phrog_130	285.8	0	anti-repressor Ant	transcription regulation
UniRef90	UHGV-1415147_36	UniRef90_A0A6N9QEI3	327.0	0	Phage repressor protein/antirepressor Ant	N/A
eggNOG-mapper	UHGV-1415147_36	1121342.AUCO01000004_gene621	316.0	0	Phage antirepressor protein	N/A
Pfam	UHGV-1415147_36	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
Pfam	UHGV-1415147_36	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
COG	UHGV-1415147_36	COG3617	N/A	N/A	Prophage antirepressor	N/A
structural_annotation	UHGV-1415147_36	PF03374,PF02498,TIGR02681,COG3645	N/A	N/A	N/A	N/A
PHROG	UHGV-1415147_37	phrog_8	49.6	0.000000000000086	transcriptional regulator	transcription regulation
UniRef90	UHGV-1415147_37	UniRef90_A0A1Y4VHM4	78.6	6.51e-18	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-1415147_37	642492.Clole_1825	65.1	0.00000000000135	sequence-specific DNA binding	N/A
Pfam	UHGV-1415147_37	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
COG	UHGV-1415147_37	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1415147_37	PF13443,NF041951,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-1415147_38	phrog_8	51.8	0.000000000000019	transcriptional regulator	transcription regulation
UniRef90	UHGV-1415147_38	UniRef90_A0A2A8HK71	73.6	0.0000000000000589	Transcriptional regulator	N/A
eggNOG-mapper	UHGV-1415147_38	696281.Desru_1067	64.3	0.0000000000855	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-1415147_38	PF12844	N/A	N/A	Helix-turn-helix domain	HTH_19
COG	UHGV-1415147_38	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
UniRef90	UHGV-1415147_40	UniRef90_R5HRH2	52.8	0.00000426	DNA-binding helix-turn-helix protein	N/A
eggNOG-mapper	UHGV-1415147_40	537007.BLAHAN_06565	49.3	0.00000546	sequence-specific DNA binding	N/A
Pfam	UHGV-1415147_40	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1415147_40	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-1415147_40	PF01381,MF_02017,TIGR03070,COG3655	N/A	N/A	N/A	N/A
KOfam	UHGV-1415147_41	K14059	161.6	0	int; integrase	N/A
PHROG	UHGV-1415147_41	phrog_1	163.8	0	integrase	integration and excision
UniRef90	UHGV-1415147_41	UniRef90_A0A1C5W824	532.0	0	Integrase	N/A
eggNOG-mapper	UHGV-1415147_41	693746.OBV_41260	293.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-1415147_41	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1415147_41	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-1415147_41	PF00589,MF_01807,TIGR02224,COG4973	N/A	N/A	N/A	N/A
UniRef90	UHGV-1415147_42	UniRef90_A0A843GWV6	106.0	6.23e-28	Rubrerythrin domain-containing protein	N/A
structural_annotation	UHGV-1415147_43	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-1415147_44	phrog_16490	50.6	0.000000000000036	N/A	unknown function
eggNOG-mapper	UHGV-1415147_44	397290.C810_05212	65.1	0.000000000614	N/A	N/A
PHROG	UHGV-1415147_45	phrog_22984	52.6	0.0000000000000083	N/A	unknown function
PHROG	UHGV-1415147_47	phrog_21825	115.9	3.3e-34	endolysin	lysis
UniRef90	UHGV-1415147_47	UniRef90_R5SN87	261.0	0	Peptidase C51 domain-containing protein	N/A
eggNOG-mapper	UHGV-1415147_47	693746.OBV_18290	151.0	2.70451e-43	CHAP domain	N/A
Pfam	UHGV-1415147_47	PF05257	N/A	N/A	CHAP domain	CHAP
COG	UHGV-1415147_47	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
structural_annotation	UHGV-1415147_47	TIGR02594	N/A	N/A	N/A	N/A
PHROG	UHGV-1415147_48	phrog_13256	43.4	0.0000000000036	N/A	unknown function
eggNOG-mapper	UHGV-1415147_48	428125.CLOLEP_01907	57.4	0.000000000369	N/A	N/A
eggNOG-mapper	UHGV-1415147_50	1519439.JPJG01000023_gene533	74.7	5.11e-16	N/A	N/A
eggNOG-mapper	UHGV-1415147_51	1519439.JPJG01000060_gene1905	575.0	0	N/A	N/A
Pfam	UHGV-1415147_51	PF18838	N/A	N/A	Large polyvalent protein associated domain 23	LPD23
UniRef90	UHGV-1415147_52	UniRef90_A0A396K636	73.6	0.000000000153	N/A	N/A
eggNOG-mapper	UHGV-1415147_52	1519439.JPJG01000060_gene1904	135.0	1.84e-32	N/A	N/A
PHROG	UHGV-1415147_53	phrog_511	183.6	0	internal virion protein	head and packaging
UniRef90	UHGV-1415147_53	UniRef90_A0A8D9UH72	247.0	0	Stabilization protein (Fragment)	N/A
eggNOG-mapper	UHGV-1415147_53	1226322.HMPREF1545_00785	432.0	0	N/A	N/A
structural_annotation	UHGV-1415147_53	PF11134,TIGR03300,NF038126,COG1520	N/A	N/A	N/A	N/A
PHROG	UHGV-1415147_55	phrog_7121	72.8	9.4e-22	tail fiber protein	tail
UniRef90	UHGV-1415147_55	UniRef90_UPI001955FC35	117.0	7.46e-25	tail fiber domain-containing protein	N/A
eggNOG-mapper	UHGV-1415147_55	1449050.JNLE01000003_gene3447	84.0	0.0000000000000193	COG COG5295 Autotransporter adhesin	N/A
Pfam	UHGV-1415147_55	PF13884	N/A	N/A	Chaperone of endosialidase	Peptidase_S74
structural_annotation	UHGV-1415147_55	PF07902,NF041249	N/A	N/A	N/A	N/A
PHROG	UHGV-1415147_56	phrog_12105	55.8	9e-16	N/A	unknown function
eggNOG-mapper	UHGV-1415147_56	1519439.JPJG01000060_gene1891	50.8	0.00000235	N/A	N/A
PHROG	UHGV-1415147_57	phrog_27545	136.1	1.2e-40	N/A	unknown function
UniRef90	UHGV-1415147_57	UniRef90_UPI0006826107	179.0	0	phage tail assembly chaperone	N/A
eggNOG-mapper	UHGV-1415147_57	1519439.JPJG01000060_gene1895	300.0	0	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1415147	Yes	43,488	57	100	1
UHGV-1473712	No	41,558	57	96	1
UHGV-1483336	No	38,326	56	89	1
UHGV-0100900	No	22,780	56	53	1