vOTU vOTU-073410

vOTU: vOTU-073410

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-073410
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00004 → vSUBFAM-00013 → vGENUS-00627 → vSUBGEN-25584 → vOTU-073410
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium
Host range breadth	Genus
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0037523
Biosample ID	SAMEA4969185
Genome length (bp)	40,529 bps
CheckV completeness	96.10% (High-quality)
CDS count	72
CDS density	89.79%
tRNA count	5
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium	Total connections	979	Host agreement	98.88
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium → Faecalibacterium prausnitzii_G	Total connections	1	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 96.1)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0037523_1	phrog_4433	147.6	7.70714e-44	N/A	unknown function
UniRef90	UHGV-0037523_1	UniRef90_A0A6M5C839	99.4	1.06e-22	Putative ADP-ribosyltransferase	N/A
eggNOG-mapper	UHGV-0037523_1	33035.JPJF01000122_gene2458	102.0	1.95e-23	regulation of DNA-templated transcription, elongation	N/A
COG	UHGV-0037523_1	COG5164	N/A	N/A	Transcription elongation factor SPT5	N/A
structural_annotation	UHGV-0037523_1	NF000318	N/A	N/A	N/A	N/A
PHROG	UHGV-0037523_3	phrog_463	216.3	0	anti-repressor	transcription regulation
UniRef90	UHGV-0037523_3	UniRef90_B0MB86	278.0	0	BRO family, N-terminal domain protein	N/A
eggNOG-mapper	UHGV-0037523_3	411490.ANACAC_00813	278.0	0	BRO family, N-terminal domain	N/A
Pfam	UHGV-0037523_3	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
Pfam	UHGV-0037523_3	PF10552	N/A	N/A	ORF6C domain	ORF6C
COG	UHGV-0037523_3	COG3617	N/A	N/A	Prophage antirepressor	N/A
structural_annotation	UHGV-0037523_3	PF10552,PF02498,TIGR02681,COG3617	N/A	N/A	N/A	N/A
UniRef90	UHGV-0037523_4	UniRef90_UPI0018995761	69.7	0.0000000000000234	helix-turn-helix transcriptional regulator	N/A
structural_annotation	UHGV-0037523_4	PF13560,NF041951,COG1396	N/A	N/A	N/A	N/A
UniRef90	UHGV-0037523_6	UniRef90_A0A7X1LWA7	92.0	5.82e-23	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0037523_6	428125.CLOLEP_02737	63.9	0.00000000000124	N/A	N/A
KOfam	UHGV-0037523_7	K07727	41.7	0.000000000027	K07727; putative transcriptional regulator	N/A
PHROG	UHGV-0037523_7	phrog_8	53.3	0.0000000000000062	transcriptional regulator	transcription regulation
UniRef90	UHGV-0037523_7	UniRef90_A0A373XY93	91.3	3.39e-21	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0037523_7	1321372.AQQB01000060_gene35	53.9	0.0000000432	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-0037523_7	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
structural_annotation	UHGV-0037523_8	PF09202,MF_01819,NF041230,COG1321	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0037523_11	321955.AAGP01000017_gene2211	64.7	0.000000000159	N/A	N/A
structural_annotation	UHGV-0037523_11	PF16900,NF040991	N/A	N/A	N/A	N/A
UniRef90	UHGV-0037523_14	UniRef90_A0A6N7TLT0	209.0	0	Helix-turn-helix domain-containing protein	N/A
Pfam	UHGV-0037523_14	PF13560	N/A	N/A	Helix-turn-helix domain	HTH_31
structural_annotation	UHGV-0037523_14	PF13560,MF_00535,NF041951,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0037523_15	K14059	134.6	1.2e-39	int; integrase	N/A
PHROG	UHGV-0037523_15	phrog_1	162.5	0	integrase	integration and excision
UniRef90	UHGV-0037523_15	UniRef90_A0A6N7TNQ4	706.0	0	Tyrosine-type recombinase/integrase	N/A
eggNOG-mapper	UHGV-0037523_15	411471.SUBVAR_05137	259.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0037523_15	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0037523_15	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-0037523_15	PF00589,MF_01808,NF007246,COG4974	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0037523_17	PF12510	N/A	N/A	N/A	N/A
PHROG	UHGV-0037523_18	phrog_20016	209.3	0	N/A	unknown function
UniRef90	UHGV-0037523_18	UniRef90_A0A285PT46	218.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-0037523_18	1226322.HMPREF1545_00077	185.0	0	N/A	N/A
structural_annotation	UHGV-0037523_18	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-0037523_19	phrog_16490	195.9	0	N/A	unknown function
eggNOG-mapper	UHGV-0037523_19	658655.HMPREF0988_00917	65.9	0.000000000985	N/A	N/A
PHROG	UHGV-0037523_20	phrog_22984	70.3	2.6e-20	N/A	unknown function
PHROG	UHGV-0037523_21	phrog_21718	88.4	8.8e-26	N/A	unknown function
eggNOG-mapper	UHGV-0037523_21	397290.C810_05210	83.6	3.73e-18	N/A	N/A
PHROG	UHGV-0037523_22	phrog_3754	95.7	4.7e-28	N/A	unknown function
eggNOG-mapper	UHGV-0037523_22	1235790.C805_00054	112.0	3.22e-30	N/A	N/A
UniRef90	UHGV-0037523_23	UniRef90_UPI000C7592F8	64.7	0.00000000000175	ribbon-helix-helix protein, CopG family	N/A
eggNOG-mapper	UHGV-0037523_23	663952.SDD27957_09060	57.8	0.000000000116	N/A	N/A
Pfam	UHGV-0037523_23	PF01402	N/A	N/A	Ribbon-helix-helix protein, copG family	RHH_1
structural_annotation	UHGV-0037523_23	PF01402,NF041793,COG3905	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0037523_24	PF07342	N/A	N/A	N/A	N/A
KOfam	UHGV-0037523_25	K07741	53.3	0.0000000000000093	antB; anti-repressor protein	N/A
PHROG	UHGV-0037523_25	phrog_63	147.7	7.84727e-44	anti-repressor Ant	transcription regulation
UniRef90	UHGV-0037523_25	UniRef90_UPI00189D7521	167.0	0	phage regulatory protein/antirepressor Ant	N/A
eggNOG-mapper	UHGV-0037523_25	99179.B5TRB0_9CAUD	150.0	7.97059e-42	DNA binding	N/A
Pfam	UHGV-0037523_25	PF09669	N/A	N/A	Phage regulatory protein Rha (Phage_pRha)	Phage_pRha
Pfam	UHGV-0037523_25	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
NCBIFam	UHGV-0037523_25	TIGR02681.1	N/A	N/A	phage regulatory protein, Rha family	N/A
structural_annotation	UHGV-0037523_25	PF03374,PF02498,TIGR02681,COG3617,COG3645	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0037523_26	PF04545,MF_00245,NF001074,COG2739	N/A	N/A	N/A	N/A
PHROG	UHGV-0037523_29	phrog_15303	73.3	2.6e-21	N/A	unknown function
KOfam	UHGV-0037523_31	K07273	156.3	0	acm; lysozyme	N/A
PHROG	UHGV-0037523_31	phrog_291	110.5	1.7e-32	endolysin	lysis
UniRef90	UHGV-0037523_31	UniRef90_A0A564U0D3	432.0	0	Autolytic lysozyme	N/A
eggNOG-mapper	UHGV-0037523_31	718252.FP2_04890	261.0	0	hydrolase, family 25	N/A
Pfam	UHGV-0037523_31	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-0037523_31	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-0037523_31	PF01183,TIGR04053,COG3757	N/A	N/A	N/A	N/A
KOfam	UHGV-0037523_32	K10804	64.5	1.9e-18	tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]	N/A
PHROG	UHGV-0037523_32	phrog_14008	43.4	0.0000000000031	N/A	unknown function
UniRef90	UHGV-0037523_32	UniRef90_A0A4D6APD5	223.0	0	Tail fiber protein	N/A
eggNOG-mapper	UHGV-0037523_32	536233.CLO_1374	153.0	9.34e-38	GDSL-like Lipase/Acylhydrolase family	N/A
Pfam	UHGV-0037523_32	PF13472	N/A	N/A	GDSL-like Lipase/Acylhydrolase family	Lipase_GDSL_2
PHROG	UHGV-0037523_33	phrog_3558	191.3	0	tail protein	tail
UniRef90	UHGV-0037523_33	UniRef90_A0A2N5PMH5	165.0	6.92e-40	Prophage_tail domain-containing protein	N/A
eggNOG-mapper	UHGV-0037523_33	411460.RUMTOR_00484	167.0	1.21002e-41	Prophage endopeptidase tail	N/A
Pfam	UHGV-0037523_33	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
COG	UHGV-0037523_33	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0037523_33	PF14594,TIGR01665,COG4379	N/A	N/A	N/A	N/A
UniRef90	UHGV-0037523_34	UniRef90_A0A415UCK7	92.0	9.05e-20	MtfA protein	N/A
eggNOG-mapper	UHGV-0037523_34	1111121.HMPREF1247_1241	98.2	7.56e-23	N/A	N/A
structural_annotation	UHGV-0037523_34	PF05709,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0037523_35	phrog_9959	96.2	2e-28	tail length tape measure protein	tail
UniRef90	UHGV-0037523_35	UniRef90_UPI001C038824	433.0	0	tape measure protein	N/A
eggNOG-mapper	UHGV-0037523_35	411470.RUMGNA_02228	149.0	1.48e-34	tape measure	N/A
Pfam	UHGV-0037523_35	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-0037523_35	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-0037523_35	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-0037523_35	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0037523_38	phrog_885	68.2	9.9e-20	major tail protein	tail
eggNOG-mapper	UHGV-0037523_38	1111121.HMPREF1247_0789	152.0	4.06377e-44	N/A	N/A
structural_annotation	UHGV-0037523_38	PF06488,TIGR01603,COG5437	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0037523_39	PF13554	N/A	N/A	N/A	N/A
PHROG	UHGV-0037523_40	phrog_17977	43.5	0.0000000000043	N/A	unknown function
UniRef90	UHGV-0037523_40	UniRef90_A0A844DHJ8	126.0	4.26e-35	Phage head closure protein	N/A
structural_annotation	UHGV-0037523_40	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0037523_42	phrog_544	155.4	0	major head protein	head and packaging
UniRef90	UHGV-0037523_42	UniRef90_R0BKA1	458.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0037523_42	476272.RUMHYD_01776	340.0	0	N/A	N/A
structural_annotation	UHGV-0037523_42	PF03864,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
UniRef90	UHGV-0037523_43	UniRef90_A0A6B9SU02	83.2	2.56e-16	Fibronectin autolysin	N/A
structural_annotation	UHGV-0037523_43	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-0037523_44	phrog_478	125.8	1.8e-37	site-specific recombination directionality factor RDF	integration and excision
UniRef90	UHGV-0037523_44	UniRef90_A0A373Q857	164.0	0	YopX domain-containing protein	N/A
eggNOG-mapper	UHGV-0037523_44	1111121.HMPREF1247_0834	94.4	4.49e-23	N/A	N/A
PHROG	UHGV-0037523_46	phrog_5	50.3	0.000000000000059	tail completion or Neck1 protein	connector
UniRef90	UHGV-0037523_46	UniRef90_A0A6N7TNP6	289.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0037523_46	1123309.AQYB01000018_gene814	97.4	6.21e-24	Bacteriophage HK97-gp10, putative tail-component	N/A
Pfam	UHGV-0037523_46	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
NCBIFam	UHGV-0037523_46	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
structural_annotation	UHGV-0037523_46	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-0037523_48	phrog_8680	195.2	0	N/A	unknown function
UniRef90	UHGV-0037523_48	UniRef90_A0A844D688	456.0	0	N/A	N/A
eggNOG-mapper	UHGV-0037523_48	1423790.BN53_04265	178.0	0	Belongs to the N(4) N(6)-methyltransferase family	N/A
Pfam	UHGV-0037523_48	PF14386	N/A	N/A	N/A	DUF4417
COG	UHGV-0037523_48	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-0037523_48	PF14386	N/A	N/A	N/A	N/A
PHROG	UHGV-0037523_51	phrog_2468	79.8	2.2e-23	head morphogenesis	head and packaging
UniRef90	UHGV-0037523_51	UniRef90_A0A6N7TLR7	582.0	0	Phage_Mu_F domain-containing protein	N/A
eggNOG-mapper	UHGV-0037523_51	1504822.CCNO01000013_gene286	113.0	1.43e-24	cell adhesion	N/A
Pfam	UHGV-0037523_51	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
COG	UHGV-0037523_51	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0037523_51	PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-0037523_52	phrog_64	120.0	8.5e-36	portal protein	head and packaging
UniRef90	UHGV-0037523_52	UniRef90_A0A6N7TNT3	871.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0037523_52	642492.Clole_2764	83.6	0.0000000000000231	phage portal protein, SPP1	N/A
Pfam	UHGV-0037523_52	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0037523_52	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
KOfam	UHGV-0037523_53	K06909	141.6	7.19987e-42	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0037523_53	phrog_10250	173.6	0	N/A	unknown function
UniRef90	UHGV-0037523_53	UniRef90_A0A844D8I4	849.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0037523_53	411490.ANACAC_00783	491.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-0037523_53	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
Pfam	UHGV-0037523_53	PF17289	N/A	N/A	Terminase RNaseH-like domain	Terminase_6C
NCBIFam	UHGV-0037523_53	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0037523_53	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0037523_53	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
UniRef90	UHGV-0037523_54	UniRef90_UPI0018CC2891	118.0	3.79e-31	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0037523_54	1235790.C805_00037	109.0	1.54e-28	N/A	N/A
structural_annotation	UHGV-0037523_54	PF04218	N/A	N/A	N/A	N/A
PHROG	UHGV-0037523_56	phrog_36	54.5	0.0000000000000021	transcriptional regulator	transcription regulation
structural_annotation	UHGV-0037523_56	PF07374,MF_00245,TIGR01636,COG2739	N/A	N/A	N/A	N/A
KOfam	UHGV-0037523_58	K01160	57.5	4.3e-16	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-0037523_58	phrog_34	58.4	1.5e-16	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0037523_58	UniRef90_A0A6N7TND6	209.0	0	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-0037523_58	875454.BAEW01000002_gene491	133.0	9.61e-39	Endodeoxyribonuclease RusA	N/A
Pfam	UHGV-0037523_58	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-0037523_58	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-0037523_58	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
UniRef90	UHGV-0037523_61	UniRef90_UPI001C009709	111.0	1.04e-28	N/A	N/A
PHROG	UHGV-0037523_63	phrog_186	73.4	3.6e-21	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0037523_63	UniRef90_UPI001C02E649	362.0	0	DnaD domain protein	N/A
eggNOG-mapper	UHGV-0037523_63	718252.FP2_01000	177.0	0	N/A	N/A
Pfam	UHGV-0037523_63	PF09681	N/A	N/A	N-terminal phage replisome organiser (Phage_rep_org_N)	Phage_rep_org_N
Pfam	UHGV-0037523_63	PF07261	N/A	N/A	Replication initiation and membrane attachment	DnaB_2
NCBIFam	UHGV-0037523_63	TIGR01446.1	N/A	N/A	DnaD domain protein	N/A
COG	UHGV-0037523_63	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0037523_63	PF09681,MF_01819,TIGR01714,TIGR01446,COG3935	N/A	N/A	N/A	N/A
KOfam	UHGV-0037523_64	K03111	144.6	1.00053e-42	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0037523_64	phrog_44	148.1	4.2039e-44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0037523_64	UniRef90_D4K451	263.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0037523_64	718252.FP2_06770	263.0	0	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	N/A
Pfam	UHGV-0037523_64	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0037523_64	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0037523_64	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0037523_64	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0037523_64	PF00436,MF_00984,NF005579,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0037523_65	phrog_561	111.7	6.8e-33	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0037523_65	UniRef90_UPI0011C8A287	148.0	2.73001e-41	recombinase RecT	N/A
eggNOG-mapper	UHGV-0037523_65	33035.JPJF01000071_gene4462	147.0	1.93996e-41	N/A	N/A
structural_annotation	UHGV-0037523_65	PF03837,NF007351,COG3723	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0037523_67	PF06718	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0037523_71	PF10743,NF033787	N/A	N/A	N/A	N/A
PHROG	UHGV-0037523_72	phrog_27197	78.9	6.8e-24	N/A	unknown function
eggNOG-mapper	UHGV-0037523_72	394503.Ccel_3068	61.2	0.000000000452	regulation of DNA-templated transcription, elongation	N/A
COG	UHGV-0037523_72	COG5164	N/A	N/A	Transcription elongation factor SPT5	N/A
structural_annotation	UHGV-0037523_72	NF007410	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0037523	Yes	40,529	53	96	1