vOTU vOTU-074470

vOTU: vOTU-074470

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-074470
Number of genomes	3
Taxonomy (ICTV)	Bacteria → Bacteroidota → Bacteroidia → Bacteroidales → Bacteroidaceae → UBA6398 → UBA6398 sp003150315
Taxonomy (UHGV)	vFAM-00006 → vSUBFAM-00627 → vGENUS-00599 → vSUBGEN-43535 → vOTU-074470
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → CAG-272 → UMGS1696 → UMGS1696 sp900753285
Host range breadth	Species
Lifestyle	lytic (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1472176
Biosample ID	SAMEA2152443
Genome length (bp)	52,448 bps
CheckV completeness	99.90% (High-quality)
CDS count	93
CDS density	91.10%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → CAG-272 → UMGS1696 → UMGS1696 sp900753285	Total connections	59	Host agreement	86.44
PHIST-predicted host lineage	Bacteria → Bacteroidota → Bacteroidia → Bacteroidales → Bacteroidaceae → UBA6398 → UBA6398 sp003150315	Total connections	1	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 99.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
structural_annotation	UHGV-1472176_2	PF13744,TIGR03070,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-1472176_4	phrog_7838	140.0	1.79997e-41	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1472176_4	UniRef90_A0A8D9UGW3	196.0	0	DNA repair protein RAD52-like protein	N/A
eggNOG-mapper	UHGV-1472176_4	742767.HMPREF9456_02397	196.0	0	N/A	N/A
structural_annotation	UHGV-1472176_4	PF04098,TIGR00607,COG4380	N/A	N/A	N/A	N/A
PHROG	UHGV-1472176_5	phrog_674	41.5	1.6e-16	N/A	unknown function
Pfam	UHGV-1472176_5	PF07083	N/A	N/A	N/A	DUF1351
PHROG	UHGV-1472176_6	phrog_7838	140.0	1.79997e-41	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1472176_6	UniRef90_A0A8D9UGW3	196.0	0	DNA repair protein RAD52-like protein	N/A
eggNOG-mapper	UHGV-1472176_6	742767.HMPREF9456_02397	196.0	0	N/A	N/A
structural_annotation	UHGV-1472176_6	PF04098,TIGR00607,COG4380	N/A	N/A	N/A	N/A
PHROG	UHGV-1472176_7	phrog_674	41.5	1.6e-16	N/A	unknown function
Pfam	UHGV-1472176_7	PF07083	N/A	N/A	N/A	DUF1351
KOfam	UHGV-1472176_10	K07741	196.1	0	antB; anti-repressor protein	N/A
PHROG	UHGV-1472176_10	phrog_63	168.5	0	anti-repressor Ant	transcription regulation
UniRef90	UHGV-1472176_10	UniRef90_A0A1C6EMR2	322.0	0	Phage anti-repressor protein	N/A
eggNOG-mapper	UHGV-1472176_10	386415.NT01CX_2199	303.0	0	Phage antirepressor protein	N/A
Pfam	UHGV-1472176_10	PF08346	N/A	N/A	AntA/AntB antirepressor	AntA
Pfam	UHGV-1472176_10	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
COG	UHGV-1472176_10	COG3561	N/A	N/A	Phage anti-repressor protein Ant	N/A
structural_annotation	UHGV-1472176_10	PF03374,PF08346,TIGR02681,COG3645,COG3561	N/A	N/A	N/A	N/A
KOfam	UHGV-1472176_12	K22300	63.5	4.9e-18	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-1472176_12	phrog_8	54.3	8e-16	transcriptional regulator	transcription regulation
UniRef90	UHGV-1472176_12	UniRef90_A0A173S0H0	104.0	2.45e-26	Antitoxin PezA	N/A
eggNOG-mapper	UHGV-1472176_12	1235800.C819_02266	81.3	6.95e-18	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-1472176_12	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1472176_12	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1472176_12	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1472176_15	596152.DesU5LDRAFT_1910	83.2	5.59e-17	N/A	N/A
structural_annotation	UHGV-1472176_15	PF03787,TIGR02581,COG1604	N/A	N/A	N/A	N/A
PHROG	UHGV-1472176_17	phrog_25567	41.8	0.000000000013	N/A	unknown function
eggNOG-mapper	UHGV-1472176_17	888727.HMPREF9092_1413	54.3	0.0000000406	Helix-turn-helix	N/A
COG	UHGV-1472176_17	COG2944	N/A	N/A	DNA-binding transcriptional regulator YiaG, XRE-type HTH domain	N/A
structural_annotation	UHGV-1472176_17	PF01381,NF040522,COG1476	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1472176_23	PF19129,NF007348,COG5569	N/A	N/A	N/A	N/A
COG	UHGV-1472176_26	COG2214	N/A	N/A	Curved DNA-binding protein CbpA, contains a DnaJ-like domain	N/A
PHROG	UHGV-1472176_28	phrog_13890	52.6	0.0000000000000033	N/A	unknown function
UniRef90	UHGV-1472176_28	UniRef90_A0A316SBZ9	55.8	0.0000000263	Antitoxin	N/A
structural_annotation	UHGV-1472176_28	COG4226	N/A	N/A	N/A	N/A
Pfam	UHGV-1472176_29	PF16677	N/A	N/A	DNA-packaging protein gp3	GP3_package
UniRef90	UHGV-1472176_30	UniRef90_A0A521SZN7	82.0	3.54e-17	Ribonuclease H	N/A
eggNOG-mapper	UHGV-1472176_30	1123388.AQWU01000067_gene621	80.1	7.26e-17	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids	N/A
COG	UHGV-1472176_30	COG0328	N/A	N/A	Ribonuclease HI	N/A
PHROG	UHGV-1472176_31	phrog_38	163.5	0	terminase large subunit	head and packaging
UniRef90	UHGV-1472176_31	UniRef90_A0A843GZU6	597.0	0	Phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1472176_31	476272.RUMHYD_01940	426.0	0	TIGRFAM Phage	N/A
NCBIFam	UHGV-1472176_31	TIGR01630.1	N/A	N/A	phage terminase large subunit	N/A
COG	UHGV-1472176_31	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1472176_31	PF17289,PF02562,MF_04147,NF033889,COG5362,COG5410	N/A	N/A	N/A	N/A
PHROG	UHGV-1472176_33	phrog_64	196.3	0	portal protein	head and packaging
UniRef90	UHGV-1472176_33	UniRef90_A0A845RCM8	417.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-1472176_33	1123263.AUKY01000015_gene1609	315.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-1472176_33	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1472176_33	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-1472176_34	phrog_115	51.8	0.000000000000011	minor head protein	head and packaging
eggNOG-mapper	UHGV-1472176_34	278197.PEPE_0506	61.6	0.00000000178	Phage Mu protein F like protein	N/A
Pfam	UHGV-1472176_34	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
NCBIFam	UHGV-1472176_34	TIGR01641.1	N/A	N/A	minor capsid protein	N/A
structural_annotation	UHGV-1472176_34	PF04233,TIGR01641	N/A	N/A	N/A	N/A
PHROG	UHGV-1472176_37	phrog_29	196.3	0	major head protein	head and packaging
UniRef90	UHGV-1472176_37	UniRef90_A0A2Z4QBB4	367.0	0	Major capsid protein E	N/A
eggNOG-mapper	UHGV-1472176_37	1232453.BAIF02000058_gene1628	246.0	0	Phage major capsid protein E	N/A
Pfam	UHGV-1472176_37	PF03864	N/A	N/A	Phage major capsid protein E	Phage_cap_E
structural_annotation	UHGV-1472176_37	PF03864,MF_04133,NF041162,COG4653	N/A	N/A	N/A	N/A
UniRef90	UHGV-1472176_39	UniRef90_UPI001D07B1DB	104.0	4.9e-27	phage head-tail connector protein	N/A
eggNOG-mapper	UHGV-1472176_39	1298920.KI911353_gene2658	57.0	0.00000000364	N/A	N/A
structural_annotation	UHGV-1472176_39	TIGR01560	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1472176_40	1298920.KI911353_gene2656	74.3	0.00000000000000357	N/A	N/A
structural_annotation	UHGV-1472176_42	PF06141,TIGR02367,COG3167	N/A	N/A	N/A	N/A
UniRef90	UHGV-1472176_43	UniRef90_UPI001A9B3C90	91.3	1.07e-20	phage tail protein	N/A
structural_annotation	UHGV-1472176_43	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1472176_44	1211844.CBLM010000023_gene988	59.3	0.000000000775	N/A	N/A
Pfam	UHGV-1472176_44	PF16478	N/A	N/A	N/A	DUF5055
structural_annotation	UHGV-1472176_44	PF16478	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1472176_45	1121333.JMLH01000047_gene1011	65.9	0.0000000000131	N/A	N/A
PHROG	UHGV-1472176_46	phrog_1535	70.0	2.2e-20	tail length tape measure protein	tail
eggNOG-mapper	UHGV-1472176_46	1123263.AUKY01000015_gene1620	108.0	4.19e-21	Phage tail tape measure protein TP901	N/A
COG	UHGV-1472176_46	COG5280	N/A	N/A	Phage-related minor tail protein	N/A
PHROG	UHGV-1472176_47	phrog_1194	83.3	2.2e-24	N/A	unknown function
eggNOG-mapper	UHGV-1472176_47	1122919.KB905559_gene1345	54.3	0.000000105	N/A	N/A
Pfam	UHGV-1472176_47	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-1472176_47	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
KOfam	UHGV-1472176_48	K24485	46.1	0.00000000000022	FNDC3; fibronectin type III domain-containing protein 3	N/A
PHROG	UHGV-1472176_48	phrog_10993	268.0	0	Hoc-like head decoration	head and packaging
eggNOG-mapper	UHGV-1472176_48	1519439.JPJG01000059_gene1944	304.0	0	N/A	N/A
Pfam	UHGV-1472176_48	PF19789	N/A	N/A	N/A	DUF6273
structural_annotation	UHGV-1472176_48	PF19789,PF05113,PF16323,PF21471,PF16578,NF033848,COG3500,COG3401	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1472176_50	PF10651	N/A	N/A	N/A	N/A
PHROG	UHGV-1472176_51	phrog_13589	49.1	2.7e-24	N/A	unknown function
eggNOG-mapper	UHGV-1472176_51	411471.SUBVAR_06929	259.0	0	ATPase involved in DNA repair	N/A
COG	UHGV-1472176_51	COG0419	N/A	N/A	DNA repair exonuclease SbcCD ATPase subunit	N/A
PHROG	UHGV-1472176_53	phrog_4105	96.2	2.1e-28	N/A	unknown function
eggNOG-mapper	UHGV-1472176_53	397288.C806_00056	91.7	1.4e-22	N/A	N/A
KOfam	UHGV-1472176_54	K19304	101.8	8.1e-30	mepM; murein DD-endopeptidase [EC:3.4.24.-]	N/A
PHROG	UHGV-1472176_54	phrog_7767	100.6	1.4e-29	metallo-endopeptidase	other
UniRef90	UHGV-1472176_54	UniRef90_A0A8A2VU94	170.0	0	M23 family metallopeptidase	N/A
eggNOG-mapper	UHGV-1472176_54	1158601.I585_02846	97.1	8.29e-21	Peptidase family M23	N/A
Pfam	UHGV-1472176_54	PF01551	N/A	N/A	Peptidase family M23	Peptidase_M23
COG	UHGV-1472176_54	COG0739	N/A	N/A	Murein DD-endopeptidase MepM and murein hydrolase activator NlpD, contains LysM domain	N/A
structural_annotation	UHGV-1472176_54	PF01551,NF040883,COG0739	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1472176_56	1121334.KB911071_gene1966	56.6	0.0000000015	N/A	N/A
eggNOG-mapper	UHGV-1472176_58	1408437.JNJN01000043_gene805	68.6	0.000000000000431	N/A	N/A
PHROG	UHGV-1472176_60	phrog_16490	78.8	8.00001e-41	N/A	unknown function
eggNOG-mapper	UHGV-1472176_60	1408437.JNJN01000043_gene803	120.0	2.81e-30	N/A	N/A
eggNOG-mapper	UHGV-1472176_61	1408437.JNJN01000043_gene802	153.0	0	N/A	N/A
eggNOG-mapper	UHGV-1472176_62	1378168.N510_03079	95.5	3.49e-21	N/A	N/A
PHROG	UHGV-1472176_63	phrog_4402	156.2	0	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1472176_63	UniRef90_A0A3A9E5A5	190.0	0	RepB family plasmid replication initiator protein	N/A
eggNOG-mapper	UHGV-1472176_63	1395513.P343_18240	167.0	0	Protein involved in initiation of plasmid replication	N/A
Pfam	UHGV-1472176_63	PF01051	N/A	N/A	Initiator Replication protein, WH1	Rep3_N
Pfam	UHGV-1472176_63	PF21205	N/A	N/A	Initiator Rep protein, WH2	Rep3_C
COG	UHGV-1472176_63	COG5527	N/A	N/A	Protein involved in initiation of plasmid replication	N/A
structural_annotation	UHGV-1472176_63	PF01051,PF21205,NF038290,COG5527	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1472176_64	PF20063,NF033787	N/A	N/A	N/A	N/A
KOfam	UHGV-1472176_68	K03111	120.2	2.7e-35	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1472176_68	phrog_44	118.3	7.2e-35	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1472176_68	UniRef90_A0A7C6GL00	149.0	9.80909e-44	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1472176_68	1232443.BAIA02000073_gene513	115.0	4.66e-31	Single-strand binding protein family	N/A
Pfam	UHGV-1472176_68	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1472176_68	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1472176_68	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1472176_68	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1472176_68	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-1472176_70	phrog_474	87.7	2.2e-25	phosphofructokinase	other
UniRef90	UHGV-1472176_70	UniRef90_UPI00195F5FF7	99.4	5.43e-25	N/A	N/A
eggNOG-mapper	UHGV-1472176_70	1095750.HMPREF9970_1026	75.5	2.12e-16	N/A	N/A
Pfam	UHGV-1472176_70	PF19905	N/A	N/A	N/A	DUF6378
structural_annotation	UHGV-1472176_70	PF19905	N/A	N/A	N/A	N/A
KOfam	UHGV-1472176_71	K01160	46.4	0.0000000000011	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-1472176_71	phrog_4632	47.0	0.000000000000039	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1472176_71	UniRef90_A0A1V5ZUM0	109.0	2.64e-28	Endodeoxyribonuclease RusA	N/A
eggNOG-mapper	UHGV-1472176_71	556263.FSEG_00477	66.2	0.00000000000253	N/A	N/A
structural_annotation	UHGV-1472176_71	PF19595,NF007305,COG4570	N/A	N/A	N/A	N/A
PHROG	UHGV-1472176_81	phrog_424	96.9	2.1e-28	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1472176_81	UniRef90_A0A3B9IXU6	282.0	0	Phosphoadenosine phosphosulfate reductase	N/A
eggNOG-mapper	UHGV-1472176_81	641112.ACOK01000119_gene1505	274.0	0	Phosphoadenosine phosphosulfate reductase family	N/A
Pfam	UHGV-1472176_81	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-1472176_81	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-1472176_81	PF01507,MF_00063,TIGR02055,COG0175	N/A	N/A	N/A	N/A
PHROG	UHGV-1472176_82	phrog_7314	48.1	0.0000000000002	N/A	unknown function
UniRef90	UHGV-1472176_83	UniRef90_A0A355JDC2	97.8	1.01e-23	N/A	N/A
Pfam	UHGV-1472176_83	PF04448	N/A	N/A	N/A	DUF551
structural_annotation	UHGV-1472176_83	NF041588	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1472176_84	PF06289,COG1582	N/A	N/A	N/A	N/A
PHROG	UHGV-1472176_85	phrog_9300	79.1	4.3e-23	N/A	unknown function
UniRef90	UHGV-1472176_85	UniRef90_F2F2I1	99.8	5.37e-22	Predicted ATPase	N/A
structural_annotation	UHGV-1472176_87	PF18129,NF000331	N/A	N/A	N/A	N/A
KOfam	UHGV-1472176_88	K01520	159.0	0	dut, DUT; dUTP pyrophosphatase [EC:3.6.1.23]	N/A
PHROG	UHGV-1472176_88	phrog_135	142.4	1.3004e-42	dUTPase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1472176_88	UniRef90_A0A1L1RUW7	102.0	2.52e-22	Deoxyuridine 5'-triphosphate nucleotidohydrolase	N/A
eggNOG-mapper	UHGV-1472176_88	622312.ROSEINA2194_00085	145.0	4.66e-40	This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA	N/A
Pfam	UHGV-1472176_88	PF13392	N/A	N/A	HNH endonuclease	HNH_3
Pfam	UHGV-1472176_88	PF00692	N/A	N/A	dUTPase	dUTPase
NCBIFam	UHGV-1472176_88	TIGR00576.1	N/A	N/A	dUTP diphosphatase	N/A
COG	UHGV-1472176_88	COG0756	N/A	N/A	dUTP pyrophosphatase (dUTPase)	N/A
PHROG	UHGV-1472176_92	phrog_9804	107.7	1.1e-31	N/A	unknown function
UniRef90	UHGV-1472176_92	UniRef90_R6LQQ5	116.0	4.02e-29	Inhibitor_G39P domain-containing protein	N/A
eggNOG-mapper	UHGV-1472176_92	1499683.CCFF01000013_gene503	83.2	3.78e-17	Loader and inhibitor of phage G40P	N/A
Pfam	UHGV-1472176_92	PF11417	N/A	N/A	Loader and inhibitor of phage G40P	Inhibitor_G39P
structural_annotation	UHGV-1472176_92	PF11417	N/A	N/A	N/A	N/A
PHROG	UHGV-1472176_93	phrog_270	87.3	2.6e-25	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1472176_93	1423724.BAMM01000020_gene1808	79.0	0.00000000000000441	N/A	N/A
COG	UHGV-1472176_93	COG3756	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1472176	Yes	52,448	46	100	1
UHGV-1567386	No	19,430	46	38	1
UHGV-1877191	No	12,635	49	24	1