vOTU vOTU-074849

vOTU: vOTU-074849

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-074849
Number of genomes	4
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → ER4 → ER4 sp900317525
Taxonomy (UHGV)	vFAM-00001 → vSUBFAM-02933 → vGENUS-11228 → vSUBGEN-15720 → vOTU-074849
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → ER4 → ER4 sp900317525
Host range breadth	Species
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0201774
Biosample ID	SAMN06165010
Genome length (bp)	37,422 bps
CheckV completeness	93.37% (High-quality)
CDS count	51
CDS density	90.51%
tRNA count	3
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	PHIST
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → Dysosmobacter → Dysosmobacter sp001916835	Total connections	1	Host agreement	100
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → ER4 → ER4 sp900317525	Total connections	26	Host agreement	76.92

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 93.37)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0201774_1	K14059	155.5	0	int; integrase	N/A
PHROG	UHGV-0201774_1	phrog_1	141.3	8.09951e-42	integrase	integration and excision
UniRef90	UHGV-0201774_1	UniRef90_UPI0019572115	510.0	0	tyrosine-type recombinase/integrase	N/A
eggNOG-mapper	UHGV-0201774_1	693746.OBV_25530	375.0	0	Phage integrase family	N/A
Pfam	UHGV-0201774_1	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0201774_1	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0201774_1	PF00589,PF14659,MF_01808,NF007246,COG4973	N/A	N/A	N/A	N/A
KOfam	UHGV-0201774_2	K22299	45.4	0.0000000000015	rghR; HTH-type transcriptional regulator, competence development regulator	N/A
PHROG	UHGV-0201774_2	phrog_8	54.8	0.000000000000002	transcriptional regulator	transcription regulation
UniRef90	UHGV-0201774_2	UniRef90_A0A3D5M3K0	78.2	0.00000000000000644	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0201774_2	556261.HMPREF0240_01268	73.2	0.0000000000000354	Helix-turn-helix	N/A
Pfam	UHGV-0201774_2	PF13560	N/A	N/A	Helix-turn-helix domain	HTH_31
COG	UHGV-0201774_2	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0201774_2	PF01381,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A
UniRef90	UHGV-0201774_3	UniRef90_A0A8J6J2B4	77.4	2.44e-17	Helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-0201774_3	596329.HMPREF0631_1345	49.7	0.000000387	N/A	N/A
Pfam	UHGV-0201774_3	PF05339	N/A	N/A	N/A	DUF739
structural_annotation	UHGV-0201774_3	PF05339,NF041951,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-0201774_5	phrog_3306	121.5	3.3e-36	N/A	unknown function
UniRef90	UHGV-0201774_5	UniRef90_UPI001EF738B0	134.0	7.33e-38	N/A	N/A
eggNOG-mapper	UHGV-0201774_5	469616.FMAG_00734	131.0	1.89e-37	N/A	N/A
AcrCatalog	UHGV-0201774_5	cluster_5078	100.0	8.95e-30	NA	N/A
Pfam	UHGV-0201774_5	PF19670	N/A	N/A	N/A	DUF6173
structural_annotation	UHGV-0201774_5	PF19670	N/A	N/A	N/A	N/A
UniRef90	UHGV-0201774_7	UniRef90_UPI00164D0CB8	113.0	3.11e-31	helix-turn-helix domain-containing protein	N/A
Pfam	UHGV-0201774_7	PF05339	N/A	N/A	N/A	DUF739
COG	UHGV-0201774_7	COG3655	N/A	N/A	DNA-binding transcriptional regulator, XRE family	N/A
PHROG	UHGV-0201774_8	phrog_22529	100.6	9.9e-30	N/A	unknown function
UniRef90	UHGV-0201774_8	UniRef90_A0A352RPR8	228.0	0	3D domain-containing protein	N/A
eggNOG-mapper	UHGV-0201774_8	411461.DORFOR_01578	107.0	8.14e-25	3D domain	N/A
Pfam	UHGV-0201774_8	PF06725	N/A	N/A	3D domain	3D
COG	UHGV-0201774_8	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
structural_annotation	UHGV-0201774_8	PF06725,MF_02071,NF040670,COG3584	N/A	N/A	N/A	N/A
PHROG	UHGV-0201774_11	phrog_18562	79.3	7.1e-23	N/A	unknown function
eggNOG-mapper	UHGV-0201774_11	693746.OBV_01880	79.3	2.95e-16	N/A	N/A
KOfam	UHGV-0201774_12	K07465	56.4	4.3e-16	K07465; putative RecB family exonuclease	N/A
PHROG	UHGV-0201774_12	phrog_69	282.2	0	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0201774_12	UniRef90_A0A413FZC3	361.0	0	N/A	N/A
eggNOG-mapper	UHGV-0201774_12	693746.OBV_01860	541.0	0	N/A	N/A
Pfam	UHGV-0201774_12	PF10926	N/A	N/A	N/A	DUF2800
COG	UHGV-0201774_12	COG2887	N/A	N/A	RecB family exonuclease	N/A
structural_annotation	UHGV-0201774_12	PF10926,MF_03030,TIGR00372,COG2887	N/A	N/A	N/A	N/A
PHROG	UHGV-0201774_14	phrog_112	177.1	0	Gp2.5-like ssDNA binding protein and ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0201774_14	UniRef90_UPI0019568837	267.0	0	N/A	N/A
eggNOG-mapper	UHGV-0201774_14	693746.OBV_01850	295.0	0	N/A	N/A
Pfam	UHGV-0201774_14	PF10991	N/A	N/A	Enterobacter phage Enc34, ssDNA-binding protein	Enc34_ssDNA-bd
structural_annotation	UHGV-0201774_14	PF10991,MF_04153,NF005241	N/A	N/A	N/A	N/A
KOfam	UHGV-0201774_15	K02334	807.4	0	dpo; DNA polymerase bacteriophage-type [EC:2.7.7.7]	N/A
PHROG	UHGV-0201774_15	phrog_17	372.0	0	DNA polymerase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0201774_15	UniRef90_G9YWD0	884.0	0	DNA-directed DNA polymerase	N/A
eggNOG-mapper	UHGV-0201774_15	693746.OBV_43170	883.0	0	DNA polymerase	N/A
Pfam	UHGV-0201774_15	PF00476	N/A	N/A	DNA polymerase family A	DNA_pol_A
COG	UHGV-0201774_15	COG0749	N/A	N/A	DNA polymerase I, 3'-5' exonuclease and polymerase domains	N/A
structural_annotation	UHGV-0201774_15	PF00476,MF_04101,NF011540,COG0749	N/A	N/A	N/A	N/A
PHROG	UHGV-0201774_16	phrog_323	88.3	6e-36	endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0201774_16	UniRef90_UPI001C01CFF8	501.0	0	SANT/Myb domain-containing protein	N/A
eggNOG-mapper	UHGV-0201774_16	445972.ANACOL_00160	486.0	0	SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains	N/A
Pfam	UHGV-0201774_16	PF13921	N/A	N/A	Myb-like DNA-binding domain	Myb_DNA-bind_6
dbAPIS	UHGV-0201774_16	APIS006	N/A	N/A	Trigger programmed cell death (PCD) by P4 prophage.	N/A
structural_annotation	UHGV-0201774_16	PF11112,NF040595	N/A	N/A	N/A	N/A
UniRef90	UHGV-0201774_18	UniRef90_A0A845MY74	53.9	0.0000000252	N/A	N/A
PHROG	UHGV-0201774_20	phrog_130	153.3	1.4013e-45	anti-repressor Ant	transcription regulation
UniRef90	UHGV-0201774_20	UniRef90_A0A2A7B941	181.0	0	Bro-N domain-containing protein	N/A
eggNOG-mapper	UHGV-0201774_20	742738.HMPREF9460_02498	148.0	1.29998e-41	BRO family, N-terminal domain	N/A
Pfam	UHGV-0201774_20	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
Pfam	UHGV-0201774_20	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0201774_20	COG3617	N/A	N/A	Prophage antirepressor	N/A
structural_annotation	UHGV-0201774_20	PF02498,PF13560,NF041951,COG3617,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-0201774_21	phrog_256	968.0	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0201774_21	UniRef90_A0A1Y4J445	1096.0	0	Virulence-associated protein E	N/A
eggNOG-mapper	UHGV-0201774_21	1203606.HMPREF1526_00242	1017.0	0	virulence-associated E family protein	N/A
Pfam	UHGV-0201774_21	PF05272	N/A	N/A	Virulence-associated protein E-like domain	VapE-like_dom
COG	UHGV-0201774_21	COG5545	N/A	N/A	Predicted P-loop ATPase and inactivated derivatives	N/A
structural_annotation	UHGV-0201774_21	PF05272,MF_04000,NF005477,NF040562,COG5545	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0201774_22	PF01316,MF_00173,NF003281,COG1438	N/A	N/A	N/A	N/A
PHROG	UHGV-0201774_23	phrog_93	65.0	9.7e-19	endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0201774_23	UniRef90_G4L0U3	131.0	5.04e-38	VRR-NUC domain-containing protein	N/A
eggNOG-mapper	UHGV-0201774_23	693746.OBV_43140	131.0	8.45e-39	VRR_NUC	N/A
Pfam	UHGV-0201774_23	PF08774	N/A	N/A	VRR-NUC domain	VRR_NUC
structural_annotation	UHGV-0201774_23	PF01974,MF_01490,NF011269	N/A	N/A	N/A	N/A
KOfam	UHGV-0201774_24	K14440	110.8	4.9e-33	SMARCAL1, HARP; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:5.6.2.-]	N/A
PHROG	UHGV-0201774_24	phrog_62	385.9	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0201774_24	UniRef90_G4L0U2	726.0	0	Helicase ATP-binding domain-containing protein	N/A
eggNOG-mapper	UHGV-0201774_24	693746.OBV_43130	726.0	0	snf2 family	N/A
PADLOC	UHGV-0201774_24	DpdE_00010	97.2	2e-28	DpdE	DPD
Pfam	UHGV-0201774_24	PF00176	N/A	N/A	SNF2-related domain	SNF2-rel_dom
COG	UHGV-0201774_24	COG0553	N/A	N/A	Superfamily II DNA or RNA helicase, SNF2 family	N/A
structural_annotation	UHGV-0201774_24	PF13872,PF16203,MF_01821,NF041790,COG0553	N/A	N/A	N/A	N/A
KOfam	UHGV-0201774_25	K18830	47.3	0.00000000000046	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-0201774_25	phrog_8	52.3	0.000000000000012	transcriptional regulator	transcription regulation
UniRef90	UHGV-0201774_25	UniRef90_A0A352RPP9	99.4	5.86e-26	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0201774_25	1123511.KB905839_gene493	56.6	0.00000000267	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0201774_25	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0201774_25	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0201774_25	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-0201774_26	phrog_2412	91.5	8.2e-27	N/A	unknown function
eggNOG-mapper	UHGV-0201774_26	742738.HMPREF9460_02504	140.0	1.71e-41	N/A	N/A
KOfam	UHGV-0201774_27	K06909	391.2	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0201774_27	phrog_3717	153.1	1.4013e-45	terminase large subunit	head and packaging
UniRef90	UHGV-0201774_27	UniRef90_UPI00164D9352	807.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0201774_27	665956.HMPREF1032_02957	577.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-0201774_27	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-0201774_27	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-0201774_27	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0201774_27	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0201774_27	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0201774_29	phrog_533	202.6	0	portal protein	head and packaging
UniRef90	UHGV-0201774_29	UniRef90_UPI000680A1DB	620.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-0201774_29	693746.OBV_18040	420.0	0	N/A	N/A
structural_annotation	UHGV-0201774_29	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0201774_30	phrog_581	201.2	0	minor head protein	head and packaging
UniRef90	UHGV-0201774_30	UniRef90_UPI0006814CA4	461.0	0	phage minor capsid protein	N/A
eggNOG-mapper	UHGV-0201774_30	693746.OBV_18050	444.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-0201774_30	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
Pfam	UHGV-0201774_30	PF18451	N/A	N/A	Contact-dependent growth inhibition CdiA C-terminal domain	CdiA_C
COG	UHGV-0201774_30	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0201774_30	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-0201774_31	phrog_194	92.9	4.1e-27	head scaffolding protein	head and packaging
UniRef90	UHGV-0201774_31	UniRef90_UPI00164D9F94	315.0	0	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-0201774_31	693746.OBV_18080	177.0	0	COG NOG36366 non supervised orthologous group	N/A
Pfam	UHGV-0201774_31	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-0201774_31	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-0201774_32	phrog_422	231.0	0	major head protein	head and packaging
eggNOG-mapper	UHGV-0201774_32	693746.OBV_18090	424.0	0	N/A	N/A
structural_annotation	UHGV-0201774_32	PF21703,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
UniRef90	UHGV-0201774_33	UniRef90_UPI00164D7D74	79.0	2.57e-18	C2H2-type zinc finger protein	N/A
Pfam	UHGV-0201774_33	PF00096	N/A	N/A	Zinc finger, C2H2 type	zf-C2H2
PHROG	UHGV-0201774_35	phrog_541	53.7	0.0000000000000034	head-tail adaptor	connector
eggNOG-mapper	UHGV-0201774_35	693746.OBV_18110	116.0	3.01e-32	N/A	N/A
structural_annotation	UHGV-0201774_36	PF20536,MF_01370,TIGR02126	N/A	N/A	N/A	N/A
PHROG	UHGV-0201774_37	phrog_556	50.3	0.000000000000032	minor head protein	head and packaging
UniRef90	UHGV-0201774_37	UniRef90_UPI00164EC49A	275.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0201774_37	33035.JPJF01000106_gene3128	80.9	3.82e-17	N/A	N/A
Pfam	UHGV-0201774_37	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0201774_37	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0201774_38	phrog_3266	52.5	0.0000000000000068	tail completion	connector
eggNOG-mapper	UHGV-0201774_38	693746.OBV_18140	213.0	0	N/A	N/A
structural_annotation	UHGV-0201774_38	PF08873	N/A	N/A	N/A	N/A
PHROG	UHGV-0201774_39	phrog_3099	79.5	4.7e-23	N/A	unknown function
eggNOG-mapper	UHGV-0201774_39	693746.OBV_18150	281.0	0	N/A	N/A
structural_annotation	UHGV-0201774_39	PF10772,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0201774_40	phrog_11299	87.3	1.7e-25	N/A	unknown function
eggNOG-mapper	UHGV-0201774_40	693746.OBV_18160	112.0	8.41e-30	N/A	N/A
structural_annotation	UHGV-0201774_40	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-0201774_41	phrog_706	118.0	7.6e-35	N/A	unknown function
UniRef90	UHGV-0201774_41	UniRef90_UPI00164D7633	350.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-0201774_41	693746.OBV_18170	266.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0201774_41	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0201774_41	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0201774_42	phrog_1535	102.0	0	tail length tape measure protein	tail
UniRef90	UHGV-0201774_42	UniRef90_A0A810PX76	150.0	3.28e-34	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-0201774_42	1235797.C816_04182	306.0	0	SLT domain	N/A
COG	UHGV-0201774_42	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0201774_42	PF05546,TIGR02559	N/A	N/A	N/A	N/A
PHROG	UHGV-0201774_43	phrog_1194	65.0	9.7e-19	N/A	unknown function
eggNOG-mapper	UHGV-0201774_43	1226322.HMPREF1545_00060	237.0	0	N/A	N/A
structural_annotation	UHGV-0201774_43	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0201774_44	phrog_13879	277.2	0	N/A	unknown function
eggNOG-mapper	UHGV-0201774_44	693746.OBV_18210	541.0	0	N/A	N/A
structural_annotation	UHGV-0201774_44	PF14594,PF03256,NF033848,COG4379,COG5156	N/A	N/A	N/A	N/A
PHROG	UHGV-0201774_45	phrog_18725	47.9	0.00000000000014	N/A	unknown function
eggNOG-mapper	UHGV-0201774_45	1226322.HMPREF1545_00062	96.7	9.81e-22	N/A	N/A
UniRef90	UHGV-0201774_49	UniRef90_A0A1Y3X1Z8	99.8	7.69e-20	Sigma70_r4 domain-containing protein	N/A
Pfam	UHGV-0201774_49	PF13384	N/A	N/A	Homeodomain-like domain	HTH_23
Pfam	UHGV-0201774_49	PF04545	N/A	N/A	Sigma-70, region 4	Sigma70_r4
NCBIFam	UHGV-0201774_49	TIGR02937.1	N/A	N/A	sigma-70 family RNA polymerase sigma factor	N/A
COG	UHGV-0201774_49	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-0201774_49	PF00196,PF04545,NF006146,NF003257,COG2771	N/A	N/A	N/A	N/A
UniRef90	UHGV-0201774_50	UniRef90_UPI0019D1E2CF	263.0	0	FAD-dependent thymidylate synthase	N/A
eggNOG-mapper	UHGV-0201774_50	1410632.JHWW01000006_gene695	202.0	0	N/A	N/A
Pfam	UHGV-0201774_50	PF02511	N/A	N/A	Thymidylate synthase complementing protein	Thy1
structural_annotation	UHGV-0201774_50	PF02511,MF_01408,TIGR02170,COG1351	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0201774	Yes	37,422	55	93	1
UHGV-1921610	No	16,763	55	42	1
UHGV-1810192	No	13,560	56	35	1
UHGV-1348931	No	11,744	55	30	1