vOTU vOTU-074864

vOTU: vOTU-074864

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-074864
Number of genomes	2
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00005 → vSUBFAM-00239 → vGENUS-01438 → vSUBGEN-16004 → vOTU-074864
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae → Ruminococcus_E → Ruminococcus_E sp003526955
Host range breadth	Species
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0133699
Biosample ID	SAMN03283281
Genome length (bp)	32,563 bps
CheckV completeness	99.90% (High-quality)
CDS count	46
CDS density	91.05%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae → Ruminococcus_E → Ruminococcus_E sp003526955	Total connections	1778	Host agreement	79.81
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae → Ruminococcus_E → Ruminococcus_E sp003526955	Total connections	81	Host agreement	95.06

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 99.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
COG	UHGV-0133699_1	COG5632	N/A	N/A	N-acetylmuramoyl-L-alanine amidase CwlA	N/A
Pfam	UHGV-0133699_2	PF10651	N/A	N/A	BppU N-terminal domain	BppU_N
structural_annotation	UHGV-0133699_2	PF10651,PF01095	N/A	N/A	N/A	N/A
PHROG	UHGV-0133699_3	phrog_1067	121.4	7.7e-36	minor head protein	head and packaging
UniRef90	UHGV-0133699_3	UniRef90_A0A348ZBV6	201.0	0	Prophage_tail domain-containing protein	N/A
eggNOG-mapper	UHGV-0133699_3	1160721.RBI_I01574	125.0	9.73e-29	Prophage endopeptidase tail	N/A
Pfam	UHGV-0133699_3	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-0133699_3	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0133699_3	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0133699_3	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0133699_4	phrog_33	81.3	2.1e-23	distal tail protein Dit	tail
UniRef90	UHGV-0133699_4	UniRef90_UPI00189E4294	77.8	0.000000000000141	phage tail family protein	N/A
eggNOG-mapper	UHGV-0133699_4	1160721.RBI_I01575	85.9	2.39e-17	Phage tail protein	N/A
COG	UHGV-0133699_4	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0133699_4	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0133699_5	phrog_23464	256.8	0	N/A	unknown function
eggNOG-mapper	UHGV-0133699_5	665950.HMPREF1025_02660	181.0	4.2039e-45	phage tail tape measure protein	N/A
COG	UHGV-0133699_5	COG5283	N/A	N/A	Phage-related tail protein	N/A
structural_annotation	UHGV-0133699_5	COG3941	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0133699_7	272562.CA_C0058	49.3	0.00000532	N/A	N/A
PHROG	UHGV-0133699_8	phrog_885	134.3	7.80001e-40	major tail protein	tail
UniRef90	UHGV-0133699_8	UniRef90_A0A101Y2E4	160.0	4.2039e-45	Big_5 domain-containing protein	N/A
eggNOG-mapper	UHGV-0133699_8	1321814.HMPREF9089_00935	176.0	0	N/A	N/A
structural_annotation	UHGV-0133699_8	PF06488,TIGR01603,COG5437	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0133699_9	PF12691	N/A	N/A	N/A	N/A
UniRef90	UHGV-0133699_10	UniRef90_UPI001A9B6FBF	155.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0133699_10	1414720.CBYM010000040_gene1650	129.0	2.55e-36	N/A	N/A
Pfam	UHGV-0133699_10	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-0133699_10	TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-0133699_11	phrog_1951	95.6	3.1e-28	head-tail adaptor	connector
UniRef90	UHGV-0133699_11	UniRef90_A0A374MZF9	184.0	0	Phage head-tail adapter protein	N/A
eggNOG-mapper	UHGV-0133699_11	1414720.CBYM010000040_gene1649	65.1	0.00000000000282	head-tail adaptor	N/A
COG	UHGV-0133699_11	COG5614	N/A	N/A	Phage head-tail adaptor	N/A
structural_annotation	UHGV-0133699_11	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0133699_12	phrog_5223	54.4	0.0000000000000019	neck protein	connector
eggNOG-mapper	UHGV-0133699_12	931626.Awo_c31020	47.8	0.00000905	N/A	N/A
NCBIFam	UHGV-0133699_12	TIGR01560.2	N/A	N/A	head-tail connector protein	N/A
structural_annotation	UHGV-0133699_12	TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-0133699_13	phrog_10	152.2	4.2039e-45	major head protein	head and packaging
UniRef90	UHGV-0133699_13	UniRef90_A0A374N9V9	731.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-0133699_13	1280689.AUJC01000011_gene1521	333.0	0	Phage major capsid protein, HK97 family	N/A
Pfam	UHGV-0133699_13	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0133699_13	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0133699_13	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0133699_13	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-0133699_14	K01358	119.4	4.7e-35	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-0133699_14	phrog_94	185.2	0	head maturation protease	head and packaging
UniRef90	UHGV-0133699_14	UniRef90_A0A374NBM3	397.0	0	ATP-dependent Clp protease proteolytic subunit	N/A
eggNOG-mapper	UHGV-0133699_14	1203606.HMPREF1526_00979	171.0	0	Belongs to the peptidase S14 family	N/A
Pfam	UHGV-0133699_14	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-0133699_14	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-0133699_14	PF00574,MF_00444,NF011091,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-0133699_15	phrog_12	179.7	0	portal protein	head and packaging
UniRef90	UHGV-0133699_15	UniRef90_A0A374NAE1	769.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0133699_15	626523.GCWU000342_01027	407.0	0	Portal protein	N/A
Pfam	UHGV-0133699_15	PF04860	N/A	N/A	Phage portal protein	Phage_portal
COG	UHGV-0133699_15	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0133699_15	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-0133699_16	phrog_9	395.7	0	terminase large subunit	head and packaging
UniRef90	UHGV-0133699_16	UniRef90_A0A374NB45	979.0	0	Terminase large subunit	N/A
eggNOG-mapper	UHGV-0133699_16	1235793.C809_01917	723.0	0	Phage Terminase	N/A
Pfam	UHGV-0133699_16	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0133699_16	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0133699_16	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0133699_16	PF20441,PF03354,MF_04145,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0133699_17	phrog_1066	115.6	2.5e-34	N/A	unknown function
UniRef90	UHGV-0133699_17	UniRef90_A0A0D0SQQ8	84.3	1.41e-18	N/A	N/A
eggNOG-mapper	UHGV-0133699_17	1203606.HMPREF1526_00982	104.0	1.89e-27	N/A	N/A
PHROG	UHGV-0133699_18	phrog_119	51.9	0.000000000000011	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0133699_18	UniRef90_A0A374N9T6	162.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-0133699_18	1235793.C809_01915	124.0	6.15e-35	HNH endonuclease	N/A
Pfam	UHGV-0133699_18	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-0133699_18	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
eggNOG-mapper	UHGV-0133699_19	1304880.JAGB01000002_gene2225	55.1	0.0000000919	N/A	N/A
structural_annotation	UHGV-0133699_19	TIGR01636	N/A	N/A	N/A	N/A
PHROG	UHGV-0133699_20	phrog_3584	149.5	2.10195e-44	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0133699_20	1235800.C819_00515	87.8	7.7e-18	N/A	N/A
structural_annotation	UHGV-0133699_20	PF21578,NF041486	N/A	N/A	N/A	N/A
PHROG	UHGV-0133699_22	phrog_824	146.4	8.40779e-44	N/A	unknown function
UniRef90	UHGV-0133699_22	UniRef90_A0A3D3D6C6	201.0	0	VRR-NUC domain-containing protein	N/A
eggNOG-mapper	UHGV-0133699_22	397288.C806_00096	154.0	0	VRR_NUC	N/A
Pfam	UHGV-0133699_22	PF08774	N/A	N/A	VRR-NUC domain	VRR_NUC
structural_annotation	UHGV-0133699_22	PF08774	N/A	N/A	N/A	N/A
PHROG	UHGV-0133699_23	phrog_30343	168.9	0	N/A	unknown function
eggNOG-mapper	UHGV-0133699_23	411473.RUMCAL_00285	200.0	0	N/A	N/A
structural_annotation	UHGV-0133699_23	PF11039,MF_02210,TIGR03585,COG1670	N/A	N/A	N/A	N/A
PHROG	UHGV-0133699_25	phrog_2118	120.6	1.4e-35	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0133699_25	UniRef90_A0A373KMT6	209.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-0133699_25	610130.Closa_0730	170.0	0	HNH endonuclease	N/A
Pfam	UHGV-0133699_25	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-0133699_25	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-0133699_25	COG1403	N/A	N/A	N/A	N/A
KOfam	UHGV-0133699_28	K00390	100.6	9.8e-30	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	N/A
PHROG	UHGV-0133699_28	phrog_424	117.8	8.8e-35	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0133699_28	UniRef90_UPI001C034617	445.0	0	phosphoadenosine phosphosulfate reductase family protein	N/A
eggNOG-mapper	UHGV-0133699_28	1408437.JNJN01000032_gene2312	325.0	0	Phosphoadenosine phosphosulfate reductase	N/A
PADLOC	UHGV-0133699_28	BrxP_00001	73.6	5.3e-22	BrxP	BREX
Pfam	UHGV-0133699_28	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-0133699_28	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-0133699_28	PF01507,MF_00063,NF010369,COG0175	N/A	N/A	N/A	N/A
PHROG	UHGV-0133699_29	phrog_15609	126.0	2e-37	N/A	unknown function
UniRef90	UHGV-0133699_29	UniRef90_A0A373SLQ6	105.0	1.43e-22	N/A	N/A
eggNOG-mapper	UHGV-0133699_29	1514668.JOOA01000001_gene225	65.5	0.00000000429	N/A	N/A
structural_annotation	UHGV-0133699_29	PF11300,NF038070	N/A	N/A	N/A	N/A
PHROG	UHGV-0133699_30	phrog_8470	262.4	0	N/A	unknown function
UniRef90	UHGV-0133699_30	UniRef90_A0A1M7BII1	166.0	6.76e-40	PcfJ-like protein	N/A
eggNOG-mapper	UHGV-0133699_30	457412.RSAG_01172	179.0	7.00649e-45	PcfJ-like protein	N/A
Pfam	UHGV-0133699_30	PF14284	N/A	N/A	PcfJ-like protein	PcfJ
structural_annotation	UHGV-0133699_30	PF14284	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0133699_35	PF13443,MF_00535,NF041951,COG1396	N/A	N/A	N/A	N/A
UniRef90	UHGV-0133699_36	UniRef90_A0A373XYJ8	128.0	3.11e-37	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0133699_36	887325.HMPREF0381_0113	75.5	3.9e-17	N/A	N/A
structural_annotation	UHGV-0133699_36	PF05339,NF041951,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0133699_37	K22300	56.4	6.9e-16	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0133699_37	phrog_8	69.4	3e-20	transcriptional regulator	transcription regulation
UniRef90	UHGV-0133699_37	UniRef90_A0A136WE02	117.0	1.44e-30	Helix-turn-helix domain protein	N/A
eggNOG-mapper	UHGV-0133699_37	279010.BL03621	94.0	1.37e-21	Peptidase S24-like	N/A
Pfam	UHGV-0133699_37	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
COG	UHGV-0133699_37	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
structural_annotation	UHGV-0133699_37	PF13560,MF_00535,NF007257,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-0133699_38	phrog_1914	165.1	0	N/A	unknown function
UniRef90	UHGV-0133699_38	UniRef90_UPI000E543E50	219.0	0	ImmA/IrrE family metallo-endopeptidase	N/A
eggNOG-mapper	UHGV-0133699_38	1160721.RBI_I01604	150.0	1.73761e-43	N/A	N/A
Pfam	UHGV-0133699_38	PF06114	N/A	N/A	IrrE N-terminal-like domain	Peptidase_M78
COG	UHGV-0133699_38	COG2856	N/A	N/A	Zn-dependent peptidase ImmA, M78 family	N/A
structural_annotation	UHGV-0133699_38	PF06114,COG2856	N/A	N/A	N/A	N/A
UniRef90	UHGV-0133699_39	UniRef90_A0A374DTF3	243.0	0	N/A	N/A
KOfam	UHGV-0133699_40	K14059	188.0	0	int; integrase	N/A
PHROG	UHGV-0133699_40	phrog_1	164.7	0	integrase	integration and excision
UniRef90	UHGV-0133699_40	UniRef90_UPI00164B8B01	392.0	0	site-specific integrase	N/A
eggNOG-mapper	UHGV-0133699_40	1095750.HMPREF9970_1688	238.0	0	Phage integrase, N-terminal SAM-like domain	N/A
Pfam	UHGV-0133699_40	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0133699_40	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0133699_40	PF00589,PF12167,MF_02055,NF040815,COG4974	N/A	N/A	N/A	N/A
KOfam	UHGV-0133699_41	K03088	92.0	8.7e-27	rpoE; RNA polymerase sigma-70 factor, ECF subfamily	N/A
PHROG	UHGV-0133699_41	phrog_1740	64.0	2.1e-18	RNA polymerase sigma factor	transcription regulation
UniRef90	UHGV-0133699_41	UniRef90_A0A1G4W858	184.0	0	RNA polymerase sigma-70 factor, ECF subfamily	N/A
eggNOG-mapper	UHGV-0133699_41	1499684.CCNP01000023_gene3381	162.0	0	Belongs to the sigma-70 factor family. ECF subfamily	N/A
Pfam	UHGV-0133699_41	PF04542	N/A	N/A	Sigma-70 region 2	Sigma70_r2
Pfam	UHGV-0133699_41	PF08281	N/A	N/A	Sigma-70, region 4	Sigma70_r4_2
NCBIFam	UHGV-0133699_41	TIGR02937.1	N/A	N/A	sigma-70 family RNA polymerase sigma factor	N/A
COG	UHGV-0133699_41	COG1595	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	N/A
structural_annotation	UHGV-0133699_41	PF08281,PF04542,MF_00962,TIGR02985,COG1595	N/A	N/A	N/A	N/A
Pfam	UHGV-0133699_44	PF20234	N/A	N/A	N/A	DUF6591
structural_annotation	UHGV-0133699_44	PF20234	N/A	N/A	N/A	N/A
KOfam	UHGV-0133699_45	K12132	154.8	0	prkC, stkP; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]	N/A
PHROG	UHGV-0133699_45	phrog_2361	151.1	4.2039e-45	serine-threonine kinase	other
UniRef90	UHGV-0133699_45	UniRef90_R6MTM0	716.0	0	Protein kinase domain-containing protein	N/A
eggNOG-mapper	UHGV-0133699_45	1280689.AUJC01000004_gene249	196.0	0	Protein kinase domain	N/A
PADLOC	UHGV-0133699_45	Stk2	94.3	2e-27	N/A	N/A
Pfam	UHGV-0133699_45	PF00069	N/A	N/A	Protein kinase domain	Pkinase
COG	UHGV-0133699_45	COG0515	N/A	N/A	Serine/threonine protein kinase	N/A
UniRef90	UHGV-0133699_46	UniRef90_UPI001062ACBA	120.0	2.67e-32	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0133699_46	537013.CLOSTMETH_00224	116.0	2.01e-31	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0133699	Yes	32,563	39	100	1
UHGV-1401719	No	32,707	39	100	1