vOTU vOTU-074869

vOTU: vOTU-074869

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-074869
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00008 → vSUBFAM-00061 → vGENUS-00150 → vSUBGEN-00290 → vOTU-074869
Host lineage	Bacteria → Firmicutes_C → Negativicutes → Veillonellales → Veillonellaceae → Veillonella
Host range breadth	Genus
Lifestyle	temperate (evidence: integrase)

Representative genome
Genome ID	UHGV-1511376
Biosample ID	SAMEA2738132
Genome length (bp)	41,517 bps
CheckV completeness	99.90% (High-quality)
CDS count	55
CDS density	94.44%
tRNA count	0
Integrase	Yes
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_C → Negativicutes → Veillonellales → Veillonellaceae → Veillonella	Total connections	64	Host agreement	95.31
PHIST-predicted host lineage	Bacteria → Firmicutes_C → Negativicutes → Veillonellales → Veillonellaceae → Veillonella → Veillonella parvula_A	Total connections	1	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 99.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1511376_2	phrog_10797	217.1	0	N/A	unknown function
eggNOG-mapper	UHGV-1511376_2	883156.HMPREF9282_01266	150.0	9.94922e-44	N/A	N/A
structural_annotation	UHGV-1511376_2	PF06531	N/A	N/A	N/A	N/A
PHROG	UHGV-1511376_3	phrog_34863	57.2	1.3e-16	N/A	unknown function
UniRef90	UHGV-1511376_3	UniRef90_UPI001D017339	153.0	8.51989e-43	chitosanase	N/A
eggNOG-mapper	UHGV-1511376_3	546273.VEIDISOL_01083	234.0	0	LysM domain	N/A
Pfam	UHGV-1511376_3	PF21277	N/A	N/A	Type VI secretion system spike protein VgrG3-like, C-terminal	T6SS_VgrG3-like_C
COG	UHGV-1511376_3	COG1388	N/A	N/A	LysM repeat	N/A
structural_annotation	UHGV-1511376_3	PF21277	N/A	N/A	N/A	N/A
PHROG	UHGV-1511376_5	phrog_23091	215.8	0	N/A	unknown function
structural_annotation	UHGV-1511376_5	PF05105,NF035928	N/A	N/A	N/A	N/A
KOfam	UHGV-1511376_7	K13925	42.0	0.0000000000037	pfbA; plasmin and fibronectin-binding protein A	N/A
UniRef90	UHGV-1511376_7	UniRef90_A0A2S7ZGN5	1218.0	0	Pectate_lyase_3 domain-containing protein	N/A
eggNOG-mapper	UHGV-1511376_7	1443111.JASG01000004_gene3704	61.2	0.00000122	Pectate lyase superfamily protein	N/A
COG	UHGV-1511376_7	COG5434	N/A	N/A	Polygalacturonase	N/A
structural_annotation	UHGV-1511376_7	PF05096,PF03906,MF_03008,TIGR03866,COG3204	N/A	N/A	N/A	N/A
KOfam	UHGV-1511376_8	K20478	97.3	1.1e-29	GOLGB1; golgin subfamily B member 1	N/A
PHROG	UHGV-1511376_8	phrog_9880	264.3	0	N/A	unknown function
UniRef90	UHGV-1511376_8	UniRef90_D1YMD8	3364.0	0	MuF_C domain-containing protein	N/A
eggNOG-mapper	UHGV-1511376_8	699218.HMPREF0889_0277	476.0	0	N/A	N/A
Pfam	UHGV-1511376_8	PF18819	N/A	N/A	Phage MuF-C-terminal domain	MuF_C
structural_annotation	UHGV-1511376_9	PF01464,COG0741	N/A	N/A	N/A	N/A
PHROG	UHGV-1511376_10	phrog_418	68.1	7.3e-20	internal virion protein	head and packaging
eggNOG-mapper	UHGV-1511376_10	1401067.HMPREF0872_06765	173.0	0	N/A	N/A
structural_annotation	UHGV-1511376_10	PF05384,TIGR01010,COG3524	N/A	N/A	N/A	N/A
PHROG	UHGV-1511376_11	phrog_308	75.3	7.2e-22	internal virion protein	head and packaging
UniRef90	UHGV-1511376_11	UniRef90_UPI001D08FF44	332.0	0	N/A	N/A
structural_annotation	UHGV-1511376_11	PF11039,MF_02210,NF000165,COG1247	N/A	N/A	N/A	N/A
PHROG	UHGV-1511376_12	phrog_376	643.3	0	tail protein	tail
UniRef90	UHGV-1511376_12	UniRef90_A0A3A4JUE0	321.0	0	E1_FCCH domain-containing protein	N/A
eggNOG-mapper	UHGV-1511376_12	1401067.HMPREF0872_06775	645.0	0	N/A	N/A
structural_annotation	UHGV-1511376_12	PF11134,MF_00923,TIGR03300,COG2706	N/A	N/A	N/A	N/A
PHROG	UHGV-1511376_13	phrog_394	168.9	0	tail protein	tail
eggNOG-mapper	UHGV-1511376_13	1401067.HMPREF0872_06780	213.0	0	N/A	N/A
structural_annotation	UHGV-1511376_13	PF17212	N/A	N/A	N/A	N/A
PHROG	UHGV-1511376_15	phrog_427	42.6	0.0000000000086	N/A	unknown function
structural_annotation	UHGV-1511376_15	PF21190	N/A	N/A	N/A	N/A
PHROG	UHGV-1511376_16	phrog_212	166.2	0	major head protein	head and packaging
UniRef90	UHGV-1511376_16	UniRef90_A0A239Z8I8	604.0	0	Phage capsid family	N/A
eggNOG-mapper	UHGV-1511376_16	1401067.HMPREF0872_06795	368.0	0	N/A	N/A
Pfam	UHGV-1511376_16	PF20911	N/A	N/A	Major capsid protein GP7	GP7
structural_annotation	UHGV-1511376_16	PF20911,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1511376_17	phrog_458	87.7	1.6e-25	protease	other
eggNOG-mapper	UHGV-1511376_17	1401067.HMPREF0872_06800	115.0	1.3e-29	N/A	N/A
PHROG	UHGV-1511376_18	phrog_528	66.4	2.4e-19	N/A	unknown function
eggNOG-mapper	UHGV-1511376_18	568816.Acin_1833	61.2	0.0000000000946	N/A	N/A
PHROG	UHGV-1511376_19	phrog_332	464.4	0	head-tail adaptor	connector
UniRef90	UHGV-1511376_19	UniRef90_UPI001D07F371	1082.0	0	portal protein	N/A
eggNOG-mapper	UHGV-1511376_19	1401067.HMPREF0872_06810	595.0	0	Bacteriophage head to tail connecting protein	N/A
Pfam	UHGV-1511376_19	PF12236	N/A	N/A	Bacteriophage head to tail connecting protein	Head-tail_con
structural_annotation	UHGV-1511376_19	PF12236,MF_04120,TIGR01538,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-1511376_21	phrog_5902	249.7	0	N/A	unknown function
UniRef90	UHGV-1511376_21	UniRef90_UPI0018A6EFE4	579.0	0	terminase	N/A
eggNOG-mapper	UHGV-1511376_21	1200557.JHWV01000001_gene277	581.0	0	Terminase RNaseH-like domain	N/A
COG	UHGV-1511376_21	COG0507	N/A	N/A	ATPase/5'-3' helicase helicase subunit RecD of the DNA repair enzyme RecBCD (exonuclease V)	N/A
structural_annotation	UHGV-1511376_21	PF03237,PF20441,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
KOfam	UHGV-1511376_22	K07474	126.6	3.2e-37	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-1511376_22	phrog_51	133.5	9.1e-40	terminase small subunit	head and packaging
UniRef90	UHGV-1511376_22	UniRef90_A0A2S7ZGQ0	208.0	0	Terminase small subunit	N/A
eggNOG-mapper	UHGV-1511376_22	1280689.AUJC01000003_gene961	127.0	7.04e-36	Terminase small subunit	N/A
Pfam	UHGV-1511376_22	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-1511376_22	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-1511376_22	PF03592,COG3728	N/A	N/A	N/A	N/A
PHROG	UHGV-1511376_26	phrog_36	50.7	0.000000000000031	transcriptional regulator	transcription regulation
UniRef90	UHGV-1511376_26	UniRef90_UPI0013DFE289	57.4	0.000000143	N/A	N/A
eggNOG-mapper	UHGV-1511376_26	706434.HMPREF9429_00383	58.5	0.00000000928	N/A	N/A
structural_annotation	UHGV-1511376_26	PF07374	N/A	N/A	N/A	N/A
PHROG	UHGV-1511376_28	phrog_21026	81.2	1e-23	N/A	unknown function
PHROG	UHGV-1511376_29	phrog_419	105.2	6.4e-31	N/A	unknown function
UniRef90	UHGV-1511376_29	UniRef90_A0A6G6XL02	93.2	3.4e-23	MazG-like nucleotide pyrophosphohydrolase	N/A
eggNOG-mapper	UHGV-1511376_29	1123263.AUKY01000015_gene1587	90.5	5.94e-23	N/A	N/A
structural_annotation	UHGV-1511376_29	PF14083	N/A	N/A	N/A	N/A
PHROG	UHGV-1511376_31	phrog_774	64.5	1.9e-18	N/A	unknown function
UniRef90	UHGV-1511376_31	UniRef90_A0A4V0ERX0	62.8	0.0000000000335	N/A	N/A
eggNOG-mapper	UHGV-1511376_31	1042156.CXIVA_01820	55.1	0.0000000078	N/A	N/A
KOfam	UHGV-1511376_34	K19232	124.7	4.79999e-40	btaE; hyaluronate-binding autotransporter adhesin	N/A
UniRef90	UHGV-1511376_34	UniRef90_UPI001D068F5F	412.0	0	YadA-like family protein	N/A
eggNOG-mapper	UHGV-1511376_34	1128111.HMPREF0870_01786	176.0	0	Hep Hag repeat protein	N/A
Pfam	UHGV-1511376_34	PF05658	N/A	N/A	YadA head domain repeat (2 copies)	YadA_head
Pfam	UHGV-1511376_34	PF03895	N/A	N/A	YadA-like membrane anchor domain	YadA_anchor
COG	UHGV-1511376_34	COG5295	N/A	N/A	Autotransporter adhesin	N/A
structural_annotation	UHGV-1511376_34	PF03895,NF033478,COG5295	N/A	N/A	N/A	N/A
KOfam	UHGV-1511376_35	K01520	150.8	8.40779e-45	dut, DUT; dUTP pyrophosphatase [EC:3.6.1.23]	N/A
PHROG	UHGV-1511376_35	phrog_135	145.5	1.90577e-43	dUTPase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1511376_35	UniRef90_UPI001D0616FF	247.0	0	dUTP diphosphatase	N/A
eggNOG-mapper	UHGV-1511376_35	36080.S2JYN8	120.0	3.73e-33	dUTPase	N/A
Pfam	UHGV-1511376_35	PF00692	N/A	N/A	dUTPase	dUTPase
NCBIFam	UHGV-1511376_35	TIGR00576.1	N/A	N/A	dUTP diphosphatase	N/A
COG	UHGV-1511376_35	COG0756	N/A	N/A	dUTP pyrophosphatase (dUTPase)	N/A
structural_annotation	UHGV-1511376_35	PF00692,MF_00116,NF001862,COG0756	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1511376_36	PF13384,NF040595	N/A	N/A	N/A	N/A
PHROG	UHGV-1511376_37	phrog_244	78.0	1.3e-22	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1511376_37	UniRef90_A0A841R0Q1	146.0	3.1249e-43	Holliday junction resolvase	N/A
eggNOG-mapper	UHGV-1511376_37	1123250.KB908417_gene653	137.0	2.66e-40	N/A	N/A
structural_annotation	UHGV-1511376_37	PF01870,MF_01490,NF040854,COG1591	N/A	N/A	N/A	N/A
PHROG	UHGV-1511376_39	phrog_1672	46.8	0.00000000000039	N/A	unknown function
COG	UHGV-1511376_39	COG4933	N/A	N/A	Predicted transcriptional regulator, contains an HTH and PUA-like domains	N/A
structural_annotation	UHGV-1511376_40	PF16857,MF_00273	N/A	N/A	N/A	N/A
KOfam	UHGV-1511376_41	K03111	142.3	4.69996e-42	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1511376_41	phrog_44	126.2	2.3e-37	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1511376_41	UniRef90_UPI000750C286	225.0	0	single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1511376_41	936589.HMPREF1521_1228	196.0	0	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	N/A
Pfam	UHGV-1511376_41	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1511376_41	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1511376_41	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1511376_41	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1511376_41	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-1511376_43	phrog_9804	80.2	2.2e-23	N/A	unknown function
structural_annotation	UHGV-1511376_43	PF11417	N/A	N/A	N/A	N/A
PHROG	UHGV-1511376_44	phrog_5968	196.2	0	replisome organizer	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1511376_44	UniRef90_UPI0019608C6C	426.0	0	phage replisome organizer N-terminal domain-containing protein	N/A
eggNOG-mapper	UHGV-1511376_44	565664.EFXG_01794	206.0	0	Phage replisome organizer, N-terminal domain protein	N/A
Pfam	UHGV-1511376_44	PF09681	N/A	N/A	N-terminal phage replisome organiser (Phage_rep_org_N)	Phage_rep_org_N
NCBIFam	UHGV-1511376_44	TIGR01714.1	N/A	N/A	phage replisome organizer, putative, N-terminal region	N/A
COG	UHGV-1511376_44	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-1511376_44	PF09681,TIGR01714,COG3388	N/A	N/A	N/A	N/A
PHROG	UHGV-1511376_46	phrog_72	61.6	1.1e-17	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1511376_46	UniRef90_R5BGH3	130.0	4.79e-35	Conserved domain protein	N/A
eggNOG-mapper	UHGV-1511376_46	1507.HMPREF0262_00432	99.0	1.35e-23	N/A	N/A
PHROG	UHGV-1511376_47	phrog_7838	114.4	9.1e-34	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1511376_47	UniRef90_UPI001D07B780	406.0	0	RAD52 family DNA repair protein	N/A
eggNOG-mapper	UHGV-1511376_47	1485543.JMME01000021_gene803	116.0	5.97e-30	N/A	N/A
Pfam	UHGV-1511376_47	PF04098	N/A	N/A	Rad52/22 family double-strand break repair protein	Rad52_Rad22
structural_annotation	UHGV-1511376_47	PF06420,TIGR00607,COG4712	N/A	N/A	N/A	N/A
PHROG	UHGV-1511376_48	phrog_674	82.4	6.2e-25	N/A	unknown function
UniRef90	UHGV-1511376_48	UniRef90_UPI001D090BA8	501.0	0	N/A	N/A
eggNOG-mapper	UHGV-1511376_48	1415775.U729_15	80.1	0.0000000000000165	N/A	N/A
Pfam	UHGV-1511376_48	PF07083	N/A	N/A	N/A	DUF1351
structural_annotation	UHGV-1511376_48	PF07083	N/A	N/A	N/A	N/A
PHROG	UHGV-1511376_50	phrog_7735	80.4	1.6e-23	excisionase	integration and excision
UniRef90	UHGV-1511376_50	UniRef90_UPI001D08B64F	172.0	0	helix-turn-helix domain-containing protein	N/A
Pfam	UHGV-1511376_50	PF12728	N/A	N/A	Helix-turn-helix domain	HTH_17
structural_annotation	UHGV-1511376_50	PF12728,MF_01155,NF033787,COG3311	N/A	N/A	N/A	N/A
PHROG	UHGV-1511376_52	phrog_2967	62.3	6.8e-18	transcriptional regulator	transcription regulation
UniRef90	UHGV-1511376_52	UniRef90_UPI001D073245	210.0	0	helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-1511376_52	861450.HMPREF0080_02022	142.0	7.7702e-42	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-1511376_52	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
COG	UHGV-1511376_52	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
structural_annotation	UHGV-1511376_52	PF12844,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-1511376_54	phrog_20936	111.3	3.6e-33	N/A	unknown function
UniRef90	UHGV-1511376_54	UniRef90_UPI001D086FA7	172.0	0	ImmA/IrrE family metallo-endopeptidase	N/A
eggNOG-mapper	UHGV-1511376_54	706434.HMPREF9429_00182	60.1	0.0000000000825	N/A	N/A
Pfam	UHGV-1511376_54	PF06114	N/A	N/A	IrrE N-terminal-like domain	Peptidase_M78
structural_annotation	UHGV-1511376_54	PF06114	N/A	N/A	N/A	N/A
KOfam	UHGV-1511376_55	K14059	213.2	0	int; integrase	N/A
PHROG	UHGV-1511376_55	phrog_1	197.6	0	integrase	integration and excision
UniRef90	UHGV-1511376_55	UniRef90_UPI001D091886	675.0	0	site-specific integrase	N/A
eggNOG-mapper	UHGV-1511376_55	1232428.CAVO010000003_gene1025	258.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-1511376_55	PF14657	N/A	N/A	Arm DNA-binding domain	Arm-DNA-bind_4
Pfam	UHGV-1511376_55	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1511376_55	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1511376_55	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1511376	Yes	41,517	37	100	1