vOTU vOTU-074993

vOTU: vOTU-074993

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-074993
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00003 → vSUBFAM-02146 → vGENUS-18482 → vSUBGEN-35074 → vOTU-074993
Host lineage
Host range breadth
Lifestyle	lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1506828
Biosample ID	N/A
Genome length (bp)	35,577 bps
CheckV completeness	99.90% (High-quality)
CDS count	52
CDS density	94.62%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method
CRISPR-predicted host lineage	Total connections	Host agreement
PHIST-predicted host lineage	Total connections	Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 99.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1506828_1	phrog_1529	74.6	2e-21	N/A	unknown function
UniRef90	UHGV-1506828_1	UniRef90_A0A854CRP1	58.2	0.0000000796	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-1506828_1	525378.HMPREF0793_2047	53.5	0.000000143	N/A	N/A
KOfam	UHGV-1506828_3	K01447	48.7	0.00000000000013	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-1506828_3	phrog_635	150.1	1.4013e-44	endolysin	lysis
UniRef90	UHGV-1506828_3	UniRef90_A0A6H1F0K8	537.0	0	N-acetylmuramoyl-L-alanine amidase domain-containing protein	N/A
eggNOG-mapper	UHGV-1506828_3	562981.HMPREF0428_01802	537.0	0	Ami_2	N/A
Pfam	UHGV-1506828_3	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
Pfam	UHGV-1506828_3	PF08239	N/A	N/A	Bacterial SH3 domain	SH3_3
COG	UHGV-1506828_3	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-1506828_3	PF01510,PF18342,MF_04111,NF041850,NF008758,COG5632	N/A	N/A	N/A	N/A
PHROG	UHGV-1506828_4	phrog_1129	43.7	0.0000000000017	holin	lysis
Pfam	UHGV-1506828_4	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
PHROG	UHGV-1506828_5	phrog_32123	121.6	0	N/A	unknown function
eggNOG-mapper	UHGV-1506828_5	1005705.HMPREF9967_1058	128.0	4.06e-28	domain, Protein	N/A
COG	UHGV-1506828_5	COG3266	N/A	N/A	Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain	N/A
PHROG	UHGV-1506828_6	phrog_199	62.9	3.7e-18	holin	lysis
UniRef90	UHGV-1506828_6	UniRef90_UPI00195EE93F	216.0	0	phage holin family protein	N/A
eggNOG-mapper	UHGV-1506828_6	562981.HMPREF0428_01805	211.0	0	Bacteriophage holin family	N/A
Pfam	UHGV-1506828_6	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-1506828_6	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
structural_annotation	UHGV-1506828_6	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
PHROG	UHGV-1506828_8	phrog_1060	58.6	6.9e-17	N/A	unknown function
UniRef90	UHGV-1506828_8	UniRef90_A0A420YQX1	187.0	0	N/A	N/A
eggNOG-mapper	UHGV-1506828_8	1321820.HMPREF1983_00919	55.8	0.0000000927	N/A	N/A
Pfam	UHGV-1506828_8	PF07104	N/A	N/A	N/A	DUF1366
structural_annotation	UHGV-1506828_8	PF07104,TIGR00638	N/A	N/A	N/A	N/A
PHROG	UHGV-1506828_9	phrog_2270	487.7	0	N/A	unknown function
UniRef90	UHGV-1506828_9	UniRef90_A0A420YQM7	1167.0	0	Peptidase S74 domain-containing protein	N/A
eggNOG-mapper	UHGV-1506828_9	1321820.HMPREF1983_00922	508.0	0	N/A	N/A
Pfam	UHGV-1506828_9	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
Pfam	UHGV-1506828_9	PF13884	N/A	N/A	Chaperone of endosialidase	Peptidase_S74
NCBIFam	UHGV-1506828_9	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-1506828_9	COG4926	N/A	N/A	Phage-related protein	N/A
PHROG	UHGV-1506828_10	phrog_33	73.7	4.1e-21	distal tail protein Dit	tail
UniRef90	UHGV-1506828_10	UniRef90_A0A2N6SFF3	394.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-1506828_10	1321820.HMPREF1983_00923	309.0	0	tail component	N/A
COG	UHGV-1506828_10	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-1506828_10	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-1506828_11	phrog_58	294.4	0	tail length tape measure protein	tail
UniRef90	UHGV-1506828_11	UniRef90_A0A2N6SDE9	1019.0	0	PblA	N/A
eggNOG-mapper	UHGV-1506828_11	1321820.HMPREF1983_00924	849.0	0	Phage tail tape measure protein	N/A
COG	UHGV-1506828_11	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1506828_11	PF20155	N/A	N/A	N/A	N/A
PHROG	UHGV-1506828_12	phrog_1633	175.6	0	N/A	unknown function
UniRef90	UHGV-1506828_12	UniRef90_A0A139NAW5	157.0	0	N/A	N/A
eggNOG-mapper	UHGV-1506828_12	1321820.HMPREF1983_00925	186.0	0	N/A	N/A
Pfam	UHGV-1506828_12	PF17318	N/A	N/A	N/A	DUF5361
structural_annotation	UHGV-1506828_12	PF17318	N/A	N/A	N/A	N/A
PHROG	UHGV-1506828_13	phrog_1526	106.7	1e-31	N/A	unknown function
UniRef90	UHGV-1506828_13	UniRef90_A0A4U9XM96	102.0	1.05e-26	N/A	N/A
eggNOG-mapper	UHGV-1506828_13	1321820.HMPREF1983_00926	127.0	2.32e-37	N/A	N/A
PHROG	UHGV-1506828_14	phrog_117	176.6	0	major tail protein	tail
UniRef90	UHGV-1506828_14	UniRef90_U2QNN1	325.0	0	Prophage LambdaSa1, structural protein	N/A
eggNOG-mapper	UHGV-1506828_14	1321820.HMPREF1983_00927	325.0	0	domain, Protein	N/A
COG	UHGV-1506828_14	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1506828_14	PF04630,TIGR01603,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1506828_15	phrog_123	60.9	2.2e-17	tail terminator	connector
UniRef90	UHGV-1506828_15	UniRef90_A0A0E4CTM5	120.0	2.63e-33	N/A	N/A
eggNOG-mapper	UHGV-1506828_15	1321820.HMPREF1983_00928	174.0	0	N/A	N/A
structural_annotation	UHGV-1506828_15	PF06141	N/A	N/A	N/A	N/A
PHROG	UHGV-1506828_16	phrog_387	91.8	4.3e-27	neck protein	connector
UniRef90	UHGV-1506828_16	UniRef90_A0A380KNT4	85.1	3.99e-20	N/A	N/A
eggNOG-mapper	UHGV-1506828_16	1321820.HMPREF1983_00929	107.0	1.3e-29	N/A	N/A
PHROG	UHGV-1506828_17	phrog_501	95.1	5.6e-28	head closure Hc1	connector
UniRef90	UHGV-1506828_17	UniRef90_Q7Y4I1	153.0	0	Gp43	N/A
eggNOG-mapper	UHGV-1506828_17	1321820.HMPREF1983_00930	189.0	0	N/A	N/A
structural_annotation	UHGV-1506828_17	PF12206,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1506828_18	phrog_137	108.3	4.1e-32	head-tail adaptor Ad1	connector
UniRef90	UHGV-1506828_18	UniRef90_U2RW81	217.0	0	Phage protein Gp19/Gp15/Gp42	N/A
eggNOG-mapper	UHGV-1506828_18	1321820.HMPREF1983_00931	217.0	0	Phage protein Gp19/Gp15/Gp42	N/A
Pfam	UHGV-1506828_18	PF09355	N/A	N/A	N/A	Phage_Gp19
structural_annotation	UHGV-1506828_18	PF09355	N/A	N/A	N/A	N/A
PHROG	UHGV-1506828_20	phrog_32396	156.6	0	N/A	unknown function
UniRef90	UHGV-1506828_20	UniRef90_A0A2N6SCF3	510.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-1506828_20	1214184.ALKY01000039_gene918	491.0	0	Phage capsid family	N/A
Pfam	UHGV-1506828_20	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-1506828_20	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
structural_annotation	UHGV-1506828_20	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1506828_21	phrog_233	119.1	4.6e-35	head scaffolding protein	head and packaging
UniRef90	UHGV-1506828_21	UniRef90_A0A2N6SCG6	229.0	0	Phage scaffold protein	N/A
eggNOG-mapper	UHGV-1506828_21	1321820.HMPREF1983_00934	189.0	0	N/A	N/A
structural_annotation	UHGV-1506828_21	PF14265	N/A	N/A	N/A	N/A
PHROG	UHGV-1506828_22	phrog_17688	493.5	0	N/A	unknown function
UniRef90	UHGV-1506828_22	UniRef90_U2S4W8	874.0	0	Putative phage terminase, large subunit	N/A
eggNOG-mapper	UHGV-1506828_22	1321820.HMPREF1983_00935	874.0	0	phage terminase, large subunit	N/A
Pfam	UHGV-1506828_22	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-1506828_22	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-1506828_22	PF20441,PF03354,MF_04146,NF033889,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-1506828_23	phrog_2494	299.4	0	minor head protein	head and packaging
UniRef90	UHGV-1506828_23	UniRef90_U2RW86	347.0	0	CdiA_C domain-containing protein	N/A
eggNOG-mapper	UHGV-1506828_23	1321820.HMPREF1983_00936	347.0	0	N/A	N/A
PHROG	UHGV-1506828_24	phrog_104	295.1	0	portal protein	head and packaging
UniRef90	UHGV-1506828_24	UniRef90_A0A4J1ZT89	721.0	0	Gp34	N/A
eggNOG-mapper	UHGV-1506828_24	1321820.HMPREF1983_00937	848.0	0	Phage portal protein, SPP1 Gp6-like	N/A
structural_annotation	UHGV-1506828_24	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
PHROG	UHGV-1506828_25	phrog_338	107.6	1.3e-31	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1506828_25	UniRef90_A0A2N6SCF6	213.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-1506828_25	1321820.HMPREF1983_00938	190.0	0	HNH endonuclease	N/A
Pfam	UHGV-1506828_25	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-1506828_25	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-1506828_25	PF01844,COG1403	N/A	N/A	N/A	N/A
UniRef90	UHGV-1506828_26	UniRef90_A0A2X4N3V1	181.0	0	RNA polymerase sigma factor, sigma-70 family	N/A
structural_annotation	UHGV-1506828_26	PF08281,TIGR01636,COG2739	N/A	N/A	N/A	N/A
PHROG	UHGV-1506828_28	phrog_2131	102.7	2.3e-30	N/A	unknown function
eggNOG-mapper	UHGV-1506828_28	73422.L0P2P5_9CAUD	85.5	2.15e-19	N/A	N/A
PHROG	UHGV-1506828_29	phrog_98	57.9	1.8e-16	N/A	unknown function
UniRef90	UHGV-1506828_29	UniRef90_UPI0019591376	174.0	0	YopX family protein	N/A
eggNOG-mapper	UHGV-1506828_29	562981.HMPREF0428_00992	114.0	5.87e-31	YopX protein	N/A
Pfam	UHGV-1506828_29	PF09643	N/A	N/A	YopX protein	YopX
structural_annotation	UHGV-1506828_29	PF09643,TIGR01671	N/A	N/A	N/A	N/A
UniRef90	UHGV-1506828_32	UniRef90_UPI001A470AE5	162.0	0	med21 domain-containing protein	N/A
eggNOG-mapper	UHGV-1506828_32	562981.HMPREF0428_00991	138.0	2.42e-39	N/A	N/A
PHROG	UHGV-1506828_40	phrog_864	250.2	0	DNA primase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1506828_40	UniRef90_UPI000C1B66B9	446.0	0	phage/plasmid primase, P4 family	N/A
eggNOG-mapper	UHGV-1506828_40	202752.JL53_03700	421.0	0	D5 N terminal like	N/A
Pfam	UHGV-1506828_40	PF19263	N/A	N/A	N/A	DUF5906
COG	UHGV-1506828_40	COG3378	N/A	N/A	DNA primase, phage- or plasmid-associated	N/A
structural_annotation	UHGV-1506828_40	PF19263,PF08706,PF03288,PF09250,MF_04000,TIGR01613,COG3378	N/A	N/A	N/A	N/A
KOfam	UHGV-1506828_41	K02319	61.6	3.9e-18	pol; DNA polymerase, archaea type [EC:2.7.7.7]	N/A
PHROG	UHGV-1506828_41	phrog_1252	387.0	0	DNA polymerase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1506828_41	UniRef90_A0A7Z0LH61	426.0	0	DNA_pol_B domain-containing protein	N/A
eggNOG-mapper	UHGV-1506828_41	202752.JL53_03695	410.0	0	DNA polymerase elongation subunit (Family B)	N/A
COG	UHGV-1506828_41	COG0417	N/A	N/A	DNA polymerase B elongation subunit	N/A
structural_annotation	UHGV-1506828_41	PF08490,MF_04100,TIGR00592,COG0417	N/A	N/A	N/A	N/A
PHROG	UHGV-1506828_42	phrog_6479	212.2	0	N/A	unknown function
UniRef90	UHGV-1506828_42	UniRef90_B6D7K3	110.0	3.31e-26	Gp30	N/A
PHROG	UHGV-1506828_43	phrog_674	64.7	6.1e-19	N/A	unknown function
UniRef90	UHGV-1506828_43	UniRef90_A0A7Z0LHL1	62.0	0.000000094	N/A	N/A
eggNOG-mapper	UHGV-1506828_43	938278.CAJO01000051_gene810	69.3	0.0000000000466	N/A	N/A
Pfam	UHGV-1506828_43	PF07083	N/A	N/A	N/A	DUF1351
structural_annotation	UHGV-1506828_43	PF07083	N/A	N/A	N/A	N/A
PHROG	UHGV-1506828_44	phrog_392	123.1	3e-36	metal-dependent hydrolase	other
UniRef90	UHGV-1506828_44	UniRef90_S4TZZ0	341.0	0	Metallo-beta-lactamase-like protein	N/A
eggNOG-mapper	UHGV-1506828_44	202752.JL53_03675	174.0	0	May be involved in the transport of PQQ or its precursor to the periplasm	N/A
Pfam	UHGV-1506828_44	PF12706	N/A	N/A	Beta-lactamase superfamily domain	Lactamase_B_2
COG	UHGV-1506828_44	COG1235	N/A	N/A	Phosphoribosyl 1,2-cyclic phosphate phosphodiesterase	N/A
structural_annotation	UHGV-1506828_44	PF12706,MF_01818,TIGR03307,COG1234	N/A	N/A	N/A	N/A
Pfam	UHGV-1506828_45	PF21205	N/A	N/A	Initiator Rep protein, WH2	Rep3_C
UniRef90	UHGV-1506828_47	UniRef90_UPI0019595D10	148.0	4.76441e-44	N/A	N/A
KOfam	UHGV-1506828_49	K01520	75.6	7.1e-22	dut, DUT; dUTP pyrophosphatase [EC:3.6.1.23]	N/A
PHROG	UHGV-1506828_49	phrog_135	95.8	3.8e-28	dUTPase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1506828_49	UniRef90_UPI00195646D9	292.0	0	dUTPase	N/A
eggNOG-mapper	UHGV-1506828_49	562981.HMPREF0428_01011	129.0	2.66e-35	dUTPase	N/A
Pfam	UHGV-1506828_49	PF00692	N/A	N/A	dUTPase	dUTPase
COG	UHGV-1506828_49	COG0756	N/A	N/A	dUTP pyrophosphatase (dUTPase)	N/A
structural_annotation	UHGV-1506828_49	PF00692,MF_00116,NF010561,COG0756	N/A	N/A	N/A	N/A
UniRef90	UHGV-1506828_50	UniRef90_A0A134A0C2	55.1	0.0000000122	AGC-kinase C-terminal domain-containing protein	N/A
UniRef90	UHGV-1506828_52	UniRef90_A0A6H1F518	138.0	1.37005e-41	N/A	N/A
eggNOG-mapper	UHGV-1506828_52	562981.HMPREF0428_01862	138.0	2.29953e-42	N/A	N/A
Pfam	UHGV-1506828_52	PF05339	N/A	N/A	N/A	DUF739
COG	UHGV-1506828_52	COG3655	N/A	N/A	DNA-binding transcriptional regulator, XRE family	N/A
structural_annotation	UHGV-1506828_52	PF05339,NF002773,COG1476	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1506828	Yes	35,577	33	100	1