vOTU vOTU-075186

vOTU: vOTU-075186

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-075186
Number of genomes	1
Taxonomy (ICTV)
Taxonomy (UHGV)	vFAM-00015 → vSUBFAM-00575 → vGENUS-00426 → vSUBGEN-02395 → vOTU-075186
Host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Coprococcus_A → Coprococcus_A catus
Host range breadth	Species
Lifestyle	lytic (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1442745
Biosample ID	SAMN02334040
Genome length (bp)	17,408 bps
CheckV completeness	94.72% (High-quality)
CDS count	26
CDS density	89.79%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Coprococcus_A → Coprococcus_A catus	Total connections	33	Host agreement	93.94
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 94.72)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1442745_1	phrog_2150	184.6	0	terminase	head and packaging
UniRef90	UHGV-1442745_1	UniRef90_A0A843HJH1	527.0	0	Phage DNA encapsidation protein	N/A
eggNOG-mapper	UHGV-1442745_1	10756.PKG16_BPPH2	100.0	3.21e-21	Podovirus DNA encapsidation protein (Gp16)	N/A
Pfam	UHGV-1442745_1	PF05894	N/A	N/A	Podovirus DNA encapsidation protein (Gp16)	Podovirus_Gp16
structural_annotation	UHGV-1442745_1	PF05894,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1442745_3	411459.RUMOBE_01085	53.9	0.000000301	N/A	N/A
structural_annotation	UHGV-1442745_3	PF01471	N/A	N/A	N/A	N/A
PHROG	UHGV-1442745_4	phrog_11037	72.9	2.9e-21	N/A	unknown function
UniRef90	UHGV-1442745_4	UniRef90_A0A413K5U9	109.0	2.24e-23	CHAP domain-containing protein	N/A
eggNOG-mapper	UHGV-1442745_4	552396.HMPREF0863_01358	91.3	4.78e-17	CHAP domain	N/A
Pfam	UHGV-1442745_4	PF05257	N/A	N/A	CHAP domain	CHAP
Pfam	UHGV-1442745_4	PF18013	N/A	N/A	Phage tail lysozyme	Phage_lysozyme2
COG	UHGV-1442745_4	COG3942	N/A	N/A	Surface antigen	N/A
structural_annotation	UHGV-1442745_4	PF18013,COG3942	N/A	N/A	N/A	N/A
PHROG	UHGV-1442745_6	phrog_2006	226.4	0	major head protein	head and packaging
UniRef90	UHGV-1442745_6	UniRef90_A0A843HQR2	309.0	0	Ig-like domain-containing protein	N/A
eggNOG-mapper	UHGV-1442745_6	10756.CAPSD_BPPH2	168.0	2.38221e-44	viral capsid	N/A
structural_annotation	UHGV-1442745_6	PF05065,PF02368,MF_04119,NF033394,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1442745_7	phrog_2248	112.2	0	tail protein	tail
UniRef90	UHGV-1442745_7	UniRef90_A0A843GTI5	228.0	0	Caud_tail_N domain-containing protein	N/A
eggNOG-mapper	UHGV-1442745_7	10756.DIT9_BPPH2	58.9	0.00000274	N/A	N/A
Pfam	UHGV-1442745_7	PF16838	N/A	N/A	Caudoviral major tail protein N-terminus	Caud_tail_N
Pfam	UHGV-1442745_7	PF20934	N/A	N/A	Bacillus phage phi29, Tail knob protein gp9, C-terminal domain	phi29_gp9_C
structural_annotation	UHGV-1442745_7	PF20934,PF16838	N/A	N/A	N/A	N/A
PHROG	UHGV-1442745_8	phrog_2038	152.7	2.8026e-45	upper collar connector	connector
UniRef90	UHGV-1442745_8	UniRef90_A6XAD7	123.0	3.17e-29	Upper collar	N/A
eggNOG-mapper	UHGV-1442745_8	338473.A6XAD7_9CAUD	123.0	5.32e-30	Phage Connector (GP10)	N/A
Pfam	UHGV-1442745_8	PF05352	N/A	N/A	Phage Connector (GP10)	Phage_connector
structural_annotation	UHGV-1442745_8	PF05352,TIGR01538,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-1442745_9	phrog_3225	136.7	1.7e-40	adaptor Ad4	connector
UniRef90	UHGV-1442745_9	UniRef90_A0A3G3LYS5	69.7	0.00000000011	Lower collar protein	N/A
eggNOG-mapper	UHGV-1442745_9	338473.A6XAD8_9CAUD	61.2	0.0000000223	N/A	N/A
Pfam	UHGV-1442745_10	PF12708	N/A	N/A	Pectate lyase superfamily protein	Pectate_lyase_3
structural_annotation	UHGV-1442745_13	PF05014,MF_03036,TIGR03646,COG3340	N/A	N/A	N/A	N/A
KOfam	UHGV-1442745_15	K01520	73.9	2.7e-21	dut, DUT; dUTP pyrophosphatase [EC:3.6.1.23]	N/A
PHROG	UHGV-1442745_15	phrog_135	90.3	2.3e-26	dUTPase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1442745_15	UniRef90_R6LQ85	162.0	0	Deoxyuridine 5'-triphosphate pyrophosphatase	N/A
eggNOG-mapper	UHGV-1442745_15	1218173.BALCAV_0213315	160.0	0	Deoxyuridine 5'-triphosphate	N/A
Pfam	UHGV-1442745_15	PF00692	N/A	N/A	dUTPase	dUTPase
COG	UHGV-1442745_15	COG0756	N/A	N/A	dUTP pyrophosphatase (dUTPase)	N/A
structural_annotation	UHGV-1442745_15	PF00692,MF_00116,NF001862,COG0756	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1442745_16	PF03685,MF_00342	N/A	N/A	N/A	N/A
KOfam	UHGV-1442745_17	K21237	414.7	0	gp2; Podoviridae DNA polymerase [EC:2.7.7.7]	N/A
PHROG	UHGV-1442745_17	phrog_1907	407.7	0	DNA polymerase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1442745_17	UniRef90_A0A843GSA4	924.0	0	DNA-directed DNA polymerase	N/A
eggNOG-mapper	UHGV-1442745_17	10753.DPOL_BPNF	294.0	0	nucleotide binding	N/A
Pfam	UHGV-1442745_17	PF03175	N/A	N/A	DNA polymerase type B, organellar and viral	DNA_pol_B_2
structural_annotation	UHGV-1442745_17	PF03175,MF_04055,NF004415,COG0417	N/A	N/A	N/A	N/A
KOfam	UHGV-1442745_20	K03111	134.4	1.4e-39	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1442745_20	phrog_44	130.9	9.8e-39	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1442745_20	UniRef90_D4J7E9	212.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1442745_20	1232447.BAHW02000038_gene2652	181.0	0	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	N/A
Pfam	UHGV-1442745_20	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1442745_20	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1442745_20	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1442745_20	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1442745_20	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-1442745_21	phrog_6370	49.3	0.000000000000077	dsDNA binding protein	DNA, RNA and nucleotide metabolism
structural_annotation	UHGV-1442745_21	PF17548	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1442745_25	PF07866	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1442745	Yes	17,408	36	95	1