vOTU vOTU-075440

vOTU: vOTU-075440

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-075440
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00040 → vSUBFAM-01325 → vGENUS-09796 → vSUBGEN-12020 → vOTU-075440
Host lineage	Bacteria → Firmicutes_A → Clostridia
Host range breadth	Class
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0027820
Biosample ID	N/A
Genome length (bp)	50,919 bps
CheckV completeness	99.90% (High-quality)
CDS count	61
CDS density	93.50%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia	Total connections	9	Host agreement	100
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 99.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0027820_1	phrog_801	61.3	1.9e-17	endolysin; inhibits RNA polymerase	lysis
UniRef90	UHGV-0027820_1	UniRef90_A0A2K9P078	93.6	3.91e-23	N/A	N/A
Pfam	UHGV-0027820_1	PF18909	N/A	N/A	dATP/dGTP diphosphohydrolase, N-terminal	dGTP_diPhyd_N
NCBIFam	UHGV-0027820_2	TIGR01636.1	N/A	N/A	phage transcriptional regulator, RinA family	N/A
structural_annotation	UHGV-0027820_2	PF05263,TIGR01636,COG1595	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0027820_4	931276.Cspa_c57180	63.9	0.0000000000616	DNA-packaging protein gp3	N/A
structural_annotation	UHGV-0027820_4	PF16677	N/A	N/A	N/A	N/A
PHROG	UHGV-0027820_5	phrog_38	357.5	0	terminase large subunit	head and packaging
UniRef90	UHGV-0027820_5	UniRef90_A0A845QMQ7	476.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0027820_5	755731.Clo1100_2438	403.0	0	TIGRFAM Phage	N/A
Pfam	UHGV-0027820_5	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
Pfam	UHGV-0027820_5	PF17289	N/A	N/A	Terminase RNaseH-like domain	Terminase_6C
NCBIFam	UHGV-0027820_5	TIGR01630.1	N/A	N/A	phage terminase large subunit	N/A
COG	UHGV-0027820_5	COG5362	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0027820_5	PF17289,PF05876,MF_04147,NF033889,COG5362,COG5410	N/A	N/A	N/A	N/A
PHROG	UHGV-0027820_7	phrog_156	106.9	1.4e-31	portal protein	head and packaging
eggNOG-mapper	UHGV-0027820_7	693746.OBV_01670	249.0	0	N/A	N/A
structural_annotation	UHGV-0027820_7	PF16510,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0027820_9	phrog_422	201.6	0	major head protein	head and packaging
UniRef90	UHGV-0027820_9	UniRef90_UPI00124590F3	295.0	0	N4-gp56 family major capsid protein	N/A
eggNOG-mapper	UHGV-0027820_9	755731.Clo1100_2434	269.0	0	N/A	N/A
structural_annotation	UHGV-0027820_9	PF19821,MF_04119,TIGR04387,COG1659	N/A	N/A	N/A	N/A
PHROG	UHGV-0027820_10	phrog_13046	56.2	5.9e-16	N/A	unknown function
structural_annotation	UHGV-0027820_10	PF20387	N/A	N/A	N/A	N/A
PHROG	UHGV-0027820_11	phrog_3287	42.2	0.00000000000036	virion structural protein	head and packaging
UniRef90	UHGV-0027820_11	UniRef90_A0A847CX66	220.0	0	N/A	N/A
eggNOG-mapper	UHGV-0027820_11	1408437.JNJN01000001_gene1713	98.2	1.62e-18	N/A	N/A
structural_annotation	UHGV-0027820_11	PF11134,MF_03027,NF010237,TIGR03511,COG2319	N/A	N/A	N/A	N/A
KOfam	UHGV-0027820_13	K16628	152.4	1.4013e-45	COL7A; collagen type VII alpha	N/A
PHROG	UHGV-0027820_13	phrog_6320	102.8	0	tail fiber protein	tail
eggNOG-mapper	UHGV-0027820_13	1519439.JPJG01000060_gene1892	87.8	0.0000000000000111	Collagen triple helix repeat (20 copies)	N/A
Pfam	UHGV-0027820_13	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
COG	UHGV-0027820_13	COG3064	N/A	N/A	Membrane protein TolA involved in colicin uptake	N/A
PHROG	UHGV-0027820_14	phrog_10993	221.2	0	Hoc-like head decoration	head and packaging
eggNOG-mapper	UHGV-0027820_14	718252.FP2_16970	216.0	0	N/A	N/A
Pfam	UHGV-0027820_14	PF19789	N/A	N/A	N/A	DUF6273
structural_annotation	UHGV-0027820_14	PF19789,PF08244	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0027820_15	1519439.JPJG01000060_gene1895	137.0	2.76e-38	N/A	N/A
structural_annotation	UHGV-0027820_15	PF10618	N/A	N/A	N/A	N/A
KOfam	UHGV-0027820_16	K18454	42.7	0.000000000007	deaA; chitin disaccharide deacetylase [EC:3.5.1.105]	N/A
PHROG	UHGV-0027820_16	phrog_30034	72.6	7.6e-21	N/A	unknown function
UniRef90	UHGV-0027820_16	UniRef90_A0A1C5VT90	146.0	1.11964e-42	Chitinase A1	N/A
eggNOG-mapper	UHGV-0027820_16	1235796.C815_00903	127.0	6.24e-35	N/A	N/A
Pfam	UHGV-0027820_16	PF02839	N/A	N/A	Carbohydrate-binding module family 5/12	CBM_5_12
structural_annotation	UHGV-0027820_16	PF14600	N/A	N/A	N/A	N/A
Pfam	UHGV-0027820_19	PF14354	N/A	N/A	Restriction alleviation protein Lar	Lar_restr_allev
structural_annotation	UHGV-0027820_19	PF14354,NF007260	N/A	N/A	N/A	N/A
PHROG	UHGV-0027820_20	phrog_13256	73.1	2.1e-21	N/A	unknown function
eggNOG-mapper	UHGV-0027820_20	1226322.HMPREF1545_00166	68.2	0.0000000000000381	N/A	N/A
KOfam	UHGV-0027820_21	K01447	96.6	3.6e-28	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0027820_21	phrog_670	117.7	9.5e-35	endolysin	lysis
UniRef90	UHGV-0027820_21	UniRef90_A0A3D4VSU2	147.0	1.22e-40	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-0027820_21	1203606.HMPREF1526_00589	82.4	2.51e-16	Ami_2	N/A
Pfam	UHGV-0027820_21	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
COG	UHGV-0027820_21	COG5632	N/A	N/A	N-acetylmuramoyl-L-alanine amidase CwlA	N/A
structural_annotation	UHGV-0027820_21	PF01510,MF_04111,NF008758,COG5632	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0027820_23	1123296.JQKE01000020_gene1014	98.2	5.41e-17	extracellular polysaccharide biosynthetic process	N/A
Pfam	UHGV-0027820_23	PF18760	N/A	N/A	ADP-Ribosyltransferase in polyvalent proteins	ART-PolyVal
COG	UHGV-0027820_23	COG3206	N/A	N/A	Exopolysaccharide export protein/domain GumC/Wzc1	N/A
structural_annotation	UHGV-0027820_24	PF16509,MF_00245,NF001066,COG2739	N/A	N/A	N/A	N/A
PHROG	UHGV-0027820_25	phrog_1281	114.2	7.1e-34	N/A	unknown function
UniRef90	UHGV-0027820_25	UniRef90_UPI001379C4C4	230.0	0	N/A	N/A
eggNOG-mapper	UHGV-0027820_25	1227268.HMPREF1552_01576	211.0	0	Phage-associated protein	N/A
Pfam	UHGV-0027820_25	PF13274	N/A	N/A	Antitoxin SocA-like, Panacea domain	SocA_Panacea
COG	UHGV-0027820_25	COG3600	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0027820_25	PF13274,COG3600	N/A	N/A	N/A	N/A
UniRef90	UHGV-0027820_28	UniRef90_A0A8F0WD75	79.0	0.000000000000003	RNA polymerase sigma factor/Ubiquitin-like protein	N/A
eggNOG-mapper	UHGV-0027820_28	1408437.JNJN01000043_gene801	82.0	3.62e-17	N/A	N/A
KOfam	UHGV-0027820_29	K14059	164.5	0	int; integrase	N/A
PHROG	UHGV-0027820_29	phrog_1	168.4	0	integrase	integration and excision
UniRef90	UHGV-0027820_29	UniRef90_A0A2Z4QB94	292.0	0	Tyr recombinase domain-containing protein	N/A
eggNOG-mapper	UHGV-0027820_29	1226322.HMPREF1545_00144	135.0	1.92e-34	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0027820_29	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0027820_29	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0027820_29	PF00589,PF12167,MF_02055,NF040815,COG4974	N/A	N/A	N/A	N/A
UniRef90	UHGV-0027820_30	UniRef90_A0A3D3Y4M8	200.0	0	HTH cro/C1-type domain-containing protein	N/A
Pfam	UHGV-0027820_30	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0027820_30	PF12844,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-0027820_31	phrog_2657	177.9	0	transcriptional regulator	transcription regulation
UniRef90	UHGV-0027820_31	UniRef90_A0A3D3Y5M9	563.0	0	DNA-binding protein	N/A
eggNOG-mapper	UHGV-0027820_31	428125.CLOLEP_01836	389.0	0	COG NOG08824 non supervised orthologous group	N/A
Pfam	UHGV-0027820_31	PF04383	N/A	N/A	KilA-N domain	KilA-N
structural_annotation	UHGV-0027820_31	PF04383,NF033622,COG3943	N/A	N/A	N/A	N/A
NCBIFam	UHGV-0027820_32	NF033223.2	N/A	N/A	YHYH domain-containing protein	N/A
COG	UHGV-0027820_32	COG1705	N/A	N/A	Flagellum-specific peptidoglycan hydrolase FlgJ	N/A
KOfam	UHGV-0027820_33	K22300	74.5	2e-21	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0027820_33	phrog_8	66.5	6.1e-19	transcriptional regulator	transcription regulation
UniRef90	UHGV-0027820_33	UniRef90_K1TCM8	105.0	4.39e-27	Protein containing Helix-turn-helix type 3 domain protein	N/A
eggNOG-mapper	UHGV-0027820_33	428126.CLOSPI_00402	68.6	0.00000000000129	Represses a number of genes involved in the response to DNA damage (SOS response)	N/A
Pfam	UHGV-0027820_33	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0027820_33	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
structural_annotation	UHGV-0027820_33	PF12844,MF_00535,NF007257,COG1396	N/A	N/A	N/A	N/A
UniRef90	UHGV-0027820_34	UniRef90_UPI001D0E690A	76.3	6.65e-17	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0027820_34	1163671.JAGI01000002_gene3923	48.5	0.00000101	N/A	N/A
structural_annotation	UHGV-0027820_34	PF05339,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0027820_36	PF21291,TIGR03070,COG3655	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0027820_40	1033743.CAES01000078_gene3736	53.5	0.00000429	Flagellar Assembly Protein A	N/A
COG	UHGV-0027820_40	COG1315	N/A	N/A	Flagellar assembly protein FapA, interacts with EIIAGlc	N/A
PHROG	UHGV-0027820_41	phrog_4973	63.9	2.3e-18	N/A	unknown function
UniRef90	UHGV-0027820_41	UniRef90_A0A3D3Y5F2	146.0	1.4013e-44	DNA-binding protein	N/A
eggNOG-mapper	UHGV-0027820_41	584708.Apau_1668	58.2	0.000000000501	Helix-turn-helix domain	N/A
Pfam	UHGV-0027820_41	PF14090	N/A	N/A	Helix-turn-helix domain	HTH_39
structural_annotation	UHGV-0027820_41	PF14090,TIGR00373,COG4738	N/A	N/A	N/A	N/A
PHROG	UHGV-0027820_44	phrog_14970	200.5	0	N/A	unknown function
UniRef90	UHGV-0027820_44	UniRef90_A0A3P6JH63	152.0	2.84043e-42	Essential recombination function protein	N/A
eggNOG-mapper	UHGV-0027820_44	397291.C804_03856	153.0	3.33509e-43	double-strand break repair protein	N/A
Pfam	UHGV-0027820_44	PF04098	N/A	N/A	Rad52/22 family double-strand break repair protein	Rad52_Rad22
COG	UHGV-0027820_44	COG4712	N/A	N/A	Predicted ssDNA annealing protein, contains HHH motif, Rad42/Rad22/RecT/erf family	N/A
structural_annotation	UHGV-0027820_44	PF04098,TIGR00607,COG4712	N/A	N/A	N/A	N/A
PHROG	UHGV-0027820_45	phrog_72	57.7	1.9e-16	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0027820_45	445972.ANACOL_00148	166.0	0	N/A	N/A
structural_annotation	UHGV-0027820_45	PF05772,NF007281	N/A	N/A	N/A	N/A
KOfam	UHGV-0027820_47	K03111	129.1	5.5e-38	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0027820_47	phrog_44	139.0	3.09995e-41	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0027820_47	UniRef90_R5ICL5	193.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0027820_47	693746.OBV_19910	176.0	0	Single-strand binding protein family	N/A
Pfam	UHGV-0027820_47	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0027820_47	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0027820_47	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0027820_47	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0027820_47	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0027820_48	phrog_9327	94.7	1.9e-28	primosomal protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0027820_48	UniRef90_A0A7C1NSM7	77.8	0.000000000000224	N/A	N/A
eggNOG-mapper	UHGV-0027820_48	927704.SELR_18440	92.4	2.67e-19	N-terminal phage replisome organiser (Phage_rep_org_N)	N/A
COG	UHGV-0027820_48	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0027820_48	PF07120,COG3756	N/A	N/A	N/A	N/A
KOfam	UHGV-0027820_51	K01160	48.2	0.0000000000003	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
UniRef90	UHGV-0027820_51	UniRef90_A0A1V5ZUM0	116.0	4.95e-31	Endodeoxyribonuclease RusA	N/A
eggNOG-mapper	UHGV-0027820_51	556263.FSEG_00477	49.7	0.00000612	N/A	N/A
structural_annotation	UHGV-0027820_51	PF19595,NF007305,COG4570	N/A	N/A	N/A	N/A
PHROG	UHGV-0027820_52	phrog_59	138.6	1.99993e-41	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0027820_52	UniRef90_A5ZE71	156.0	4.2039e-45	HNH endonuclease domain protein	N/A
eggNOG-mapper	UHGV-0027820_52	411901.BACCAC_01183	156.0	1.4013e-45	HNH endonuclease domain protein	N/A
PADLOC	UHGV-0027820_52	HEase_00016	92.1	2.2e-30	homing endonuclease	RM
Pfam	UHGV-0027820_52	PF07463	N/A	N/A	NUMOD4 motif	NUMOD4
Pfam	UHGV-0027820_52	PF13392	N/A	N/A	HNH endonuclease	HNH_3
structural_annotation	UHGV-0027820_52	PF07463,PF07453,TIGR01453	N/A	N/A	N/A	N/A
KOfam	UHGV-0027820_53	K00571	125.6	5.1e-37	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	N/A
PHROG	UHGV-0027820_53	phrog_67	100.4	9e-30	DNA methyltransferase	other
UniRef90	UHGV-0027820_53	UniRef90_A0A2U1CFM2	425.0	0	Methyltransferase	N/A
eggNOG-mapper	UHGV-0027820_53	411468.CLOSCI_00299	370.0	0	DNA methylase	N/A
PADLOC	UHGV-0027820_53	MTase_II_00157	92.1	1e-26	Type II methyltransferase	RM
Pfam	UHGV-0027820_53	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-0027820_53	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-0027820_53	PF01555,MF_01872,NF010253,COG0863	N/A	N/A	N/A	N/A
PHROG	UHGV-0027820_56	phrog_954	186.4	0	DNA methyltransferase	other
UniRef90	UHGV-0027820_56	UniRef90_A0A810Q0N4	263.0	0	Methyltransferase	N/A
eggNOG-mapper	UHGV-0027820_56	1280698.AUJS01000007_gene1028	254.0	0	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA	N/A
PADLOC	UHGV-0027820_56	MTase_II_00074	176.6	0	Type II methyltransferase	RM
Pfam	UHGV-0027820_56	PF08241	N/A	N/A	Methyltransferase domain	Methyltransf_11
COG	UHGV-0027820_56	COG1092	N/A	N/A	23S rRNA G2069 N7-methylase RlmK or C1962 C5-methylase RlmI	N/A
structural_annotation	UHGV-0027820_56	PF05148,MF_03044,NF033398,COG1041	N/A	N/A	N/A	N/A
PHROG	UHGV-0027820_59	phrog_38832	63.6	4.2e-19	N/A	unknown function
eggNOG-mapper	UHGV-0027820_59	665956.HMPREF1032_00143	72.8	0.0000000000000792	N/A	N/A
structural_annotation	UHGV-0027820_59	PF11717,TIGR02450	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0027820_60	PF14354,TIGR03655	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0027820	Yes	50,919	55	100	1