vOTU vOTU-075497

vOTU: vOTU-075497

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-075497
Number of genomes	1
Taxonomy (ICTV)
Taxonomy (UHGV)	vFAM-00005 → vSUBFAM-00840 → vGENUS-00721 → vSUBGEN-40565 → vOTU-075497
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → ER4 → ER4 sp000765235
Host range breadth	Species
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0028157
Biosample ID	N/A
Genome length (bp)	31,579 bps
CheckV completeness	95.21% (High-quality)
CDS count	50
CDS density	96.86%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → ER4 → ER4 sp000765235	Total connections	41	Host agreement	92.68
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 95.21)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0028157_2	phrog_9	257.2	0	terminase large subunit	head and packaging
UniRef90	UHGV-0028157_2	UniRef90_A0A3D1VAR5	740.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0028157_2	1226322.HMPREF1545_00113	688.0	0	Phage Terminase	N/A
Pfam	UHGV-0028157_2	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
Pfam	UHGV-0028157_2	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0028157_2	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0028157_2	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0028157_2	PF03354,PF20441,PF05119,MF_04146,TIGR01547,TIGR01558,COG4626,COG3747	N/A	N/A	N/A	N/A
PHROG	UHGV-0028157_3	phrog_12	188.5	0	portal protein	head and packaging
UniRef90	UHGV-0028157_3	UniRef90_U2SKC6	573.0	0	Phage portal protein, HK97 family	N/A
eggNOG-mapper	UHGV-0028157_3	1226322.HMPREF1545_00114	573.0	0	Phage portal protein, HK97 family	N/A
Pfam	UHGV-0028157_3	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-0028157_3	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-0028157_3	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0028157_3	PF04860,MF_04120,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-0028157_4	K06904	150.9	1.12104e-44	N/A	N/A
PHROG	UHGV-0028157_4	phrog_80	179.2	0	head maturation protease	head and packaging
UniRef90	UHGV-0028157_4	UniRef90_A0A1F2PDD9	242.0	0	Caudovirus prohead protease	N/A
eggNOG-mapper	UHGV-0028157_4	398512.JQKC01000009_gene450	223.0	0	Phage prohead protease, HK97 family	N/A
Pfam	UHGV-0028157_4	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
NCBIFam	UHGV-0028157_4	TIGR01543.1	N/A	N/A	HK97 family phage prohead protease	N/A
COG	UHGV-0028157_4	COG3740	N/A	N/A	Phage head maturation protease	N/A
structural_annotation	UHGV-0028157_4	PF04586,TIGR01543,COG3740	N/A	N/A	N/A	N/A
PHROG	UHGV-0028157_5	phrog_10	209.5	0	major head protein	head and packaging
UniRef90	UHGV-0028157_5	UniRef90_A0A1C6H720	701.0	0	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
eggNOG-mapper	UHGV-0028157_5	1226322.HMPREF1545_00116	640.0	0	phage major capsid protein, HK97 family	N/A
Pfam	UHGV-0028157_5	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0028157_5	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0028157_5	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0028157_5	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0028157_6	phrog_2550	58.3	8.8e-17	N/A	unknown function
UniRef90	UHGV-0028157_6	UniRef90_UPI0008717716	79.3	2.76e-17	phage head-tail connector protein	N/A
eggNOG-mapper	UHGV-0028157_6	1226322.HMPREF1545_00117	90.1	2.68e-22	N/A	N/A
structural_annotation	UHGV-0028157_6	PF05135,TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-0028157_7	phrog_19734	47.9	0.00000000000027	N/A	unknown function
eggNOG-mapper	UHGV-0028157_7	33035.JPJF01000039_gene275	52.0	0.000000643	N/A	N/A
structural_annotation	UHGV-0028157_7	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0028157_8	phrog_78	41.6	0.000000000023	tail terminator	connector
eggNOG-mapper	UHGV-0028157_8	908340.HMPREF9406_2574	75.9	1.62e-16	N/A	N/A
structural_annotation	UHGV-0028157_8	PF05657,COG3167	N/A	N/A	N/A	N/A
PHROG	UHGV-0028157_9	phrog_5	51.3	0.000000000000025	tail completion or Neck1 protein	connector
UniRef90	UHGV-0028157_9	UniRef90_A0A1C6FG30	147.0	4.40989e-42	Phage protein, HK97 gp10 family	N/A
eggNOG-mapper	UHGV-0028157_9	908340.HMPREF9406_2573	144.0	7.09057e-42	N/A	N/A
structural_annotation	UHGV-0028157_9	TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-0028157_10	phrog_88	106.9	1.2e-31	major tail protein	tail
UniRef90	UHGV-0028157_10	UniRef90_UPI0018771F27	281.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-0028157_10	33035.JPJF01000039_gene278	120.0	3.02e-31	N/A	N/A
NCBIFam	UHGV-0028157_10	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-0028157_10	PF04630,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-0028157_11	phrog_2115	41.5	0.000000000026	tail protein	tail
structural_annotation	UHGV-0028157_11	PF11836	N/A	N/A	N/A	N/A
KOfam	UHGV-0028157_13	K10398	43.8	0.0000000000016	KIF11, EG5; kinesin family member 11	N/A
PHROG	UHGV-0028157_13	phrog_6900	263.7	0	tail length tape measure protein	tail
UniRef90	UHGV-0028157_13	UniRef90_A0A373CK98	306.0	0	PblA (Fragment)	N/A
eggNOG-mapper	UHGV-0028157_13	1216932.CM240_0625	325.0	0	tape measure	N/A
COG	UHGV-0028157_13	COG5283	N/A	N/A	Phage-related tail protein	N/A
structural_annotation	UHGV-0028157_13	COG5280	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0028157_14	1235797.C816_02660	108.0	8.29e-29	N/A	N/A
structural_annotation	UHGV-0028157_14	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0028157_15	phrog_13879	534.9	0	N/A	unknown function
eggNOG-mapper	UHGV-0028157_15	1235797.C816_02659	695.0	0	N/A	N/A
structural_annotation	UHGV-0028157_15	PF14594,PF06588,NF033848,COG4379,COG5156	N/A	N/A	N/A	N/A
PHROG	UHGV-0028157_16	phrog_1589	112.3	4e-33	N/A	unknown function
UniRef90	UHGV-0028157_16	UniRef90_A2EQK5	111.0	3.27e-23	Surface antigen BspA-like	N/A
eggNOG-mapper	UHGV-0028157_16	5722.XP_001317274.1	105.0	1.57e-21	protein kinase A regulatory subunit binding	N/A
Pfam	UHGV-0028157_16	PF12810	N/A	N/A	Glycine rich protein	Gly_rich
structural_annotation	UHGV-0028157_16	PF12810,PF16893,TIGR04488,COG3979	N/A	N/A	N/A	N/A
KOfam	UHGV-0028157_17	K01361	57.6	8.8e-17	E3.4.21.96; lactocepin [EC:3.4.21.96]	N/A
PHROG	UHGV-0028157_17	phrog_11157	236.8	0	N/A	unknown function
UniRef90	UHGV-0028157_17	UniRef90_UPI001C10C6DC	393.0	0	Ig-like domain-containing protein	N/A
eggNOG-mapper	UHGV-0028157_17	33035.JPJF01000023_gene3227	285.0	0	N/A	N/A
Pfam	UHGV-0028157_17	PF09136	N/A	N/A	Glucodextranase, domain B	Glucodextran_B
COG	UHGV-0028157_17	COG3292	N/A	N/A	Periplasmic ligand-binding sensor domain	N/A
structural_annotation	UHGV-0028157_17	PF09136,PF13205,PF13754,MF_04116,NF032891,COG2372,COG5456	N/A	N/A	N/A	N/A
PHROG	UHGV-0028157_18	phrog_18725	96.1	1.3e-28	N/A	unknown function
eggNOG-mapper	UHGV-0028157_18	693746.OBV_18220	125.0	1.8e-33	N/A	N/A
structural_annotation	UHGV-0028157_18	PF13754,COG2372	N/A	N/A	N/A	N/A
UniRef90	UHGV-0028157_19	UniRef90_A0A096B066	124.0	2.51e-28	Mtd_N domain-containing protein	N/A
PHROG	UHGV-0028157_20	phrog_22773	40.4	0.000000000044	N/A	unknown function
UniRef90	UHGV-0028157_20	UniRef90_A0A8J6JIT9	50.1	0.00000777	Toxin-antitoxin system toxin subunit	N/A
eggNOG-mapper	UHGV-0028157_20	657322.FPR_21910	62.8	0.000000000132	N/A	N/A
UniRef90	UHGV-0028157_21	UniRef90_A0A1Y3Z0U4	58.9	0.0000000000783	XkdX family protein (Fragment)	N/A
structural_annotation	UHGV-0028157_21	PF09693,TIGR01669	N/A	N/A	N/A	N/A
PHROG	UHGV-0028157_22	phrog_1863	65.1	6.4e-19	N/A	unknown function
eggNOG-mapper	UHGV-0028157_22	748224.HMPREF9436_01412	98.6	3.61e-26	N/A	N/A
PHROG	UHGV-0028157_24	phrog_1129	69.9	2.5e-20	holin	lysis
UniRef90	UHGV-0028157_24	UniRef90_A0A416QZD1	122.0	9.05e-35	Enolase	N/A
eggNOG-mapper	UHGV-0028157_24	1007096.BAGW01000036_gene2663	120.0	1.08e-34	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-0028157_24	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0028157_24	PF06946	N/A	N/A	N/A	N/A
KOfam	UHGV-0028157_25	K01448	133.6	2e-39	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0028157_25	phrog_435	135.9	3.20001e-40	endolysin	lysis
UniRef90	UHGV-0028157_25	UniRef90_A0A351B2G3	61.6	0.00000178	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-0028157_25	1410668.JNKC01000001_gene1675	136.0	5.33e-34	N-Acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-0028157_25	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
Pfam	UHGV-0028157_25	PF09992	N/A	N/A	Phosphodiester glycosidase	NAGPA
Pfam	UHGV-0028157_25	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
COG	UHGV-0028157_25	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0028157_25	PF01520,PF09992,PF01471,MF_00562,TIGR02883,COG0860,COG4632,COG3409	N/A	N/A	N/A	N/A
PHROG	UHGV-0028157_26	phrog_25567	59.6	4.2e-17	N/A	unknown function
UniRef90	UHGV-0028157_26	UniRef90_UPI00164AED9E	115.0	2.51e-31	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0028157_26	877424.ATWC01000004_gene577	52.0	0.00000311	sequence-specific DNA binding	N/A
Pfam	UHGV-0028157_26	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0028157_26	COG2944	N/A	N/A	DNA-binding transcriptional regulator YiaG, XRE-type HTH domain	N/A
structural_annotation	UHGV-0028157_26	NF040522,COG2944	N/A	N/A	N/A	N/A
KOfam	UHGV-0028157_29	K14059	184.4	0	int; integrase	N/A
PHROG	UHGV-0028157_29	phrog_1	168.7	0	integrase	integration and excision
UniRef90	UHGV-0028157_29	UniRef90_A0A174HFN7	362.0	0	Site-specific tyrosine recombinase XerC	N/A
eggNOG-mapper	UHGV-0028157_29	1226322.HMPREF1545_00144	213.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0028157_29	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0028157_29	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0028157_29	PF00589,PF12167,MF_02055,NF040815,COG4974	N/A	N/A	N/A	N/A
UniRef90	UHGV-0028157_30	UniRef90_A0A6J6I5H7	68.6	0.0000000000000268	Unannotated protein	N/A
eggNOG-mapper	UHGV-0028157_30	483216.BACEGG_01163	57.4	0.000000000106	N/A	N/A
KOfam	UHGV-0028157_31	K22300	41.2	0.000000000032	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0028157_31	phrog_8	45.1	0.0000000000021	transcriptional regulator	transcription regulation
UniRef90	UHGV-0028157_31	UniRef90_A0A357CY43	87.0	1.19e-19	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0028157_31	1378168.N510_01712	77.8	0.00000000000000116	N/A	N/A
Pfam	UHGV-0028157_31	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0028157_33	NF041909	N/A	N/A	N/A	N/A
KOfam	UHGV-0028157_34	K22300	64.0	3.3e-18	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0028157_34	phrog_8	58.7	1.5e-16	transcriptional regulator	transcription regulation
UniRef90	UHGV-0028157_34	UniRef90_A0A1Y3ZNM0	85.1	1.79e-20	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0028157_34	693746.OBV_25500	77.8	2.5e-18	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-0028157_34	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0028157_34	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0028157_34	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0028157_35	PF13560,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-0028157_39	phrog_270	65.6	1.1e-18	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0028157_39	UniRef90_A0A8J6MF41	170.0	0	Helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0028157_39	693746.OBV_19830	126.0	2.54e-32	DnaD domain protein	N/A
Pfam	UHGV-0028157_39	PF13730	N/A	N/A	Helix-turn-helix domain	HTH_36
COG	UHGV-0028157_39	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0028157_39	PF20714,MF_01177,NF040582,COG3355	N/A	N/A	N/A	N/A
KOfam	UHGV-0028157_40	K02314	244.4	0	dnaB; replicative DNA helicase [EC:5.6.2.3]	N/A
PHROG	UHGV-0028157_40	phrog_19	208.1	0	DnaB-like replicative helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0028157_40	UniRef90_A0A3A8Z521	322.0	0	DNA helicase	N/A
eggNOG-mapper	UHGV-0028157_40	1007096.BAGW01000033_gene1616	278.0	0	DnaB-like helicase N terminal domain	N/A
Pfam	UHGV-0028157_40	PF00772	N/A	N/A	DnaB-like helicase N terminal domain	DnaB
Pfam	UHGV-0028157_40	PF03796	N/A	N/A	DnaB-like helicase C terminal domain	DnaB_C
COG	UHGV-0028157_40	COG0305	N/A	N/A	Replicative DNA helicase	N/A
structural_annotation	UHGV-0028157_40	PF03796,PF00772,MF_04155,NF005240,COG0305	N/A	N/A	N/A	N/A
KOfam	UHGV-0028157_42	K01520	131.4	7.8e-39	dut, DUT; dUTP pyrophosphatase [EC:3.6.1.23]	N/A
PHROG	UHGV-0028157_42	phrog_135	112.1	3.8e-33	dUTPase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0028157_42	UniRef90_UPI001D07FBC5	212.0	0	dUTP diphosphatase	N/A
eggNOG-mapper	UHGV-0028157_42	887929.HMP0721_1278	172.0	0	dUTPase	N/A
Pfam	UHGV-0028157_42	PF00692	N/A	N/A	dUTPase	dUTPase
NCBIFam	UHGV-0028157_42	TIGR00576.1	N/A	N/A	dUTP diphosphatase	N/A
COG	UHGV-0028157_42	COG0756	N/A	N/A	dUTP pyrophosphatase (dUTPase)	N/A
structural_annotation	UHGV-0028157_42	PF00692,MF_00116,TIGR00576,COG0756	N/A	N/A	N/A	N/A
KOfam	UHGV-0028157_43	K00571	93.9	2.1e-27	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	N/A
PHROG	UHGV-0028157_43	phrog_23224	187.5	0	DNA methyltransferase	other
UniRef90	UHGV-0028157_43	UniRef90_UPI001D0839DE	385.0	0	site-specific DNA-methyltransferase	N/A
eggNOG-mapper	UHGV-0028157_43	718252.FP2_06750	346.0	0	DNA methylase	N/A
PADLOC	UHGV-0028157_43	MTase_II_00172	95.8	6.5e-30	Type II methyltransferase	RM
Pfam	UHGV-0028157_43	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-0028157_43	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-0028157_43	PF01555,NF010253,COG0863	N/A	N/A	N/A	N/A
PHROG	UHGV-0028157_44	phrog_59	121.4	4.3e-36	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0028157_44	UniRef90_A0A7H9EDN0	129.0	1.03e-34	Endonuclease	N/A
eggNOG-mapper	UHGV-0028157_44	767806.D7PQ37_9CAUD	115.0	6.06e-30	HNH endonuclease	N/A
PADLOC	UHGV-0028157_44	HEase_00016	131.3	6.6e-39	homing endonuclease	RM
Pfam	UHGV-0028157_44	PF07463	N/A	N/A	NUMOD4 motif	NUMOD4
Pfam	UHGV-0028157_44	PF13392	N/A	N/A	HNH endonuclease	HNH_3
KOfam	UHGV-0028157_45	K00558	65.7	3.5e-24	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-0028157_45	phrog_17284	140.4	0	N/A	unknown function
UniRef90	UHGV-0028157_45	UniRef90_A0A1Q6JM75	640.0	0	DNA (cytosine-5-)-methyltransferase	N/A
eggNOG-mapper	UHGV-0028157_45	1235797.C816_01614	520.0	0	Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family	N/A
PADLOC	UHGV-0028157_45	MTase_II_00058	57.4	9.5e-25	Type II methyltransferase	RM
Pfam	UHGV-0028157_45	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
COG	UHGV-0028157_45	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-0028157_45	PF00145,TIGR00675,COG0270	N/A	N/A	N/A	N/A
Pfam	UHGV-0028157_46	PF04448	N/A	N/A	N/A	DUF551
structural_annotation	UHGV-0028157_46	PF04448	N/A	N/A	N/A	N/A
PHROG	UHGV-0028157_47	phrog_38832	72.3	5.6e-21	N/A	unknown function
eggNOG-mapper	UHGV-0028157_47	665956.HMPREF1032_00143	59.3	0.00000000488	N/A	N/A
structural_annotation	UHGV-0028157_47	PF11717	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0028157	Yes	31,579	61	95	1