vOTU vOTU-075499

vOTU: vOTU-075499

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-075499
Number of genomes	1
Taxonomy (ICTV)
Taxonomy (UHGV)	vFAM-00040 → vSUBFAM-00520 → vGENUS-20563 → vSUBGEN-40579 → vOTU-075499
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae
Host range breadth	Family
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0022331
Biosample ID	N/A
Genome length (bp)	39,721 bps
CheckV completeness	99.90% (High-quality)
CDS count	51
CDS density	88.38%
tRNA count	1
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae	Total connections	64	Host agreement	71.88
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 99.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
Pfam	UHGV-0022331_1	PF01402	N/A	N/A	Ribbon-helix-helix protein, copG family	RHH_1
UniRef90	UHGV-0022331_2	UniRef90_A0A2A7B8Y1	95.9	5.66e-25	CopG family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0022331_2	1378168.N510_02331	85.5	1.25e-21	Ribbon-helix-helix protein, copG family	N/A
Pfam	UHGV-0022331_2	PF01402	N/A	N/A	Ribbon-helix-helix protein, copG family	RHH_1
structural_annotation	UHGV-0022331_2	PF01402,NF041793,COG3905	N/A	N/A	N/A	N/A
KOfam	UHGV-0022331_4	K07741	104.4	2.7e-30	antB; anti-repressor protein	N/A
PHROG	UHGV-0022331_4	phrog_130	170.4	0	anti-repressor Ant	transcription regulation
UniRef90	UHGV-0022331_4	UniRef90_A0A1Y4RA31	296.0	0	Bro-N domain-containing protein	N/A
eggNOG-mapper	UHGV-0022331_4	568816.Acin_1403	256.0	0	Phage antirepressor protein KilAC domain	N/A
Pfam	UHGV-0022331_4	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
Pfam	UHGV-0022331_4	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
COG	UHGV-0022331_4	COG3617	N/A	N/A	Prophage antirepressor	N/A
structural_annotation	UHGV-0022331_4	PF03374,PF02498,COG3645,COG3617	N/A	N/A	N/A	N/A
UniRef90	UHGV-0022331_5	UniRef90_A0A810QFN4	565.0	0	LPD3 domain-containing protein	N/A
eggNOG-mapper	UHGV-0022331_5	693746.OBV_01590	354.0	0	N/A	N/A
Pfam	UHGV-0022331_5	PF18798	N/A	N/A	Large polyvalent protein-associated domain 3	LPD3
eggNOG-mapper	UHGV-0022331_6	693746.OBV_01600	56.2	0.00000802	N/A	N/A
PHROG	UHGV-0022331_7	phrog_20388	95.3	6.3e-28	endolysin	lysis
UniRef90	UHGV-0022331_7	UniRef90_UPI00189D4A1D	100.0	4.48e-22	phage tail tip lysozyme	N/A
eggNOG-mapper	UHGV-0022331_7	1203606.HMPREF1526_00253	104.0	8.67e-23	N-acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-0022331_7	PF18013	N/A	N/A	Phage tail lysozyme	Phage_lysozyme2
Pfam	UHGV-0022331_7	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
COG	UHGV-0022331_7	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0022331_7	PF18013,PF01471,COG3409	N/A	N/A	N/A	N/A
PHROG	UHGV-0022331_8	phrog_30034	120.2	2.1e-35	N/A	unknown function
UniRef90	UHGV-0022331_8	UniRef90_A0A2Y9CAD1	156.0	0	Carbohydrate binding domain-containing protein	N/A
eggNOG-mapper	UHGV-0022331_8	411460.RUMTOR_02099	133.0	8.08e-37	N/A	N/A
Pfam	UHGV-0022331_8	PF02839	N/A	N/A	Carbohydrate-binding module family 5/12	CBM_5_12
structural_annotation	UHGV-0022331_8	PF14600	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0022331_10	PF21253,PF07210,NF038128,TIGR03000,COG2512	N/A	N/A	N/A	N/A
PHROG	UHGV-0022331_11	phrog_892	55.5	1.1e-28	tail fiber protein	tail
eggNOG-mapper	UHGV-0022331_11	1408422.JHYF01000026_gene3527	93.2	2.09e-20	nuclear chromosome segregation	N/A
COG	UHGV-0022331_11	COG5301	N/A	N/A	Phage-related tail fiber protein	N/A
PHROG	UHGV-0022331_12	phrog_5107	40.3	0.000000000024	amidase	lysis
UniRef90	UHGV-0022331_12	UniRef90_A0A4D7ASB8	506.0	0	N/A	N/A
eggNOG-mapper	UHGV-0022331_12	1519439.JPJG01000011_gene54	510.0	0	N/A	N/A
structural_annotation	UHGV-0022331_12	PF11134,MF_03027,NF010237,TIGR03511,COG2319	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0022331_13	PF16677	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0022331_14	1519439.JPJG01000011_gene57	128.0	5.52e-36	N/A	N/A
structural_annotation	UHGV-0022331_14	PF11650	N/A	N/A	N/A	N/A
PHROG	UHGV-0022331_15	phrog_1129	62.6	4.6e-18	holin	lysis
UniRef90	UHGV-0022331_15	UniRef90_A0A0D8J2M2	119.0	2.32e-33	Enolase	N/A
eggNOG-mapper	UHGV-0022331_15	665956.HMPREF1032_03272	117.0	2.19e-33	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-0022331_15	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0022331_15	PF06946	N/A	N/A	N/A	N/A
PHROG	UHGV-0022331_16	phrog_1863	66.0	3.5e-19	N/A	unknown function
eggNOG-mapper	UHGV-0022331_16	748224.HMPREF9436_01412	88.6	2.49e-22	N/A	N/A
PHROG	UHGV-0022331_17	phrog_422	124.9	5.9e-37	major head protein	head and packaging
UniRef90	UHGV-0022331_17	UniRef90_A0A8J6JH37	293.0	0	Chitobiase/beta-hexosaminidase C-terminal domain-containing protein	N/A
eggNOG-mapper	UHGV-0022331_17	693746.OBV_01700	216.0	0	N/A	N/A
Pfam	UHGV-0022331_17	PF13290	N/A	N/A	Chitobiase/beta-hexosaminidase C-terminal domain	CHB_HEX_C_1
structural_annotation	UHGV-0022331_17	PF19821,PF13287,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0022331_19	phrog_156	92.0	2.1e-28	portal protein	head and packaging
eggNOG-mapper	UHGV-0022331_19	693746.OBV_01670	537.0	0	N/A	N/A
structural_annotation	UHGV-0022331_19	PF16510,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0022331_21	K06909	122.3	4.9e-36	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0022331_21	phrog_979	142.7	1.4013e-43	terminase large subunit	head and packaging
UniRef90	UHGV-0022331_21	UniRef90_A0A1M5YHQ5	488.0	0	Phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0022331_21	693746.OBV_01690	454.0	0	phage Terminase large subunit	N/A
Pfam	UHGV-0022331_21	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
COG	UHGV-0022331_21	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0022331_21	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0022331_22	1378168.N510_01472	60.1	0.0000000000407	N/A	N/A
PHROG	UHGV-0022331_23	phrog_15863	153.3	1.4013e-45	N/A	unknown function
UniRef90	UHGV-0022331_23	UniRef90_A0A1Y3R3M0	229.0	0	J domain-containing protein	N/A
eggNOG-mapper	UHGV-0022331_23	693746.OBV_01780	174.0	0	DnaJ molecular chaperone homology domain	N/A
COG	UHGV-0022331_23	COG2214	N/A	N/A	Curved DNA-binding protein CbpA, contains a DnaJ-like domain	N/A
structural_annotation	UHGV-0022331_26	PF17917	N/A	N/A	N/A	N/A
UniRef90	UHGV-0022331_29	UniRef90_A0A8F0WD75	64.7	0.000000000882	RNA polymerase sigma factor/Ubiquitin-like protein	N/A
eggNOG-mapper	UHGV-0022331_29	1408437.JNJN01000043_gene801	75.1	0.0000000000000193	N/A	N/A
KOfam	UHGV-0022331_30	K14059	227.8	0	int; integrase	N/A
PHROG	UHGV-0022331_30	phrog_1	180.3	0	integrase	integration and excision
UniRef90	UHGV-0022331_30	UniRef90_A0A3D1VH24	319.0	0	Site-specific integrase	N/A
eggNOG-mapper	UHGV-0022331_30	742738.HMPREF9460_04031	273.0	0	Phage integrase family	N/A
Pfam	UHGV-0022331_30	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-0022331_30	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0022331_30	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0022331_30	PF00589,PF02920,PF14659,MF_01808,TIGR02224,COG4974	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0022331_31	742741.HMPREF9475_00398	53.9	0.00000764	N/A	N/A
COG	UHGV-0022331_32	COG3655	N/A	N/A	DNA-binding transcriptional regulator, XRE family	N/A
structural_annotation	UHGV-0022331_32	PF13443,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A
KOfam	UHGV-0022331_33	K22300	68.8	1.1e-19	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0022331_33	phrog_8	76.5	4.3e-22	transcriptional regulator	transcription regulation
UniRef90	UHGV-0022331_33	UniRef90_A0A845MZE2	89.7	3.86e-21	Helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0022331_33	1211817.CCAT010000003_gene273	70.5	0.000000000000145	transcriptional regulator	N/A
PADLOC	UHGV-0022331_33	retron_type_VI_hth_cluster2_1	43.1	0.000000000012	N/A	Retron
Pfam	UHGV-0022331_33	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0022331_33	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
KOfam	UHGV-0022331_36	K22300	71.0	2.5e-20	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0022331_36	phrog_8	58.1	2.3e-16	transcriptional regulator	transcription regulation
UniRef90	UHGV-0022331_36	UniRef90_UPI001BB47897	69.7	0.0000000000000429	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0022331_36	693746.OBV_27490	67.8	0.0000000000000414	sequence-specific DNA binding	N/A
Pfam	UHGV-0022331_36	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0022331_36	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0022331_36	PF01381,MF_00535,NF041951,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-0022331_37	phrog_6499	118.2	3.5e-35	transcriptional regulator	transcription regulation
UniRef90	UHGV-0022331_37	UniRef90_A0A3D4EJF0	128.0	6.07e-35	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0022331_37	1415774.U728_1274	105.0	7.7e-27	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0022331_37	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0022331_37	COG1813	N/A	N/A	Archaeal ribosome-binding protein aMBF1, putative translation factor, contains Zn-ribbon and HTH domains	N/A
structural_annotation	UHGV-0022331_37	PF01381,MF_00535,NF040522,COG1476	N/A	N/A	N/A	N/A
UniRef90	UHGV-0022331_39	UniRef90_UPI001C96492F	53.9	0.000000355	excisionase family DNA-binding protein	N/A
Pfam	UHGV-0022331_39	PF12728	N/A	N/A	Helix-turn-helix domain	HTH_17
NCBIFam	UHGV-0022331_39	TIGR01764.1	N/A	N/A	excisionase family DNA-binding protein	N/A
COG	UHGV-0022331_39	COG3311	N/A	N/A	DNA-binding transcriptional regulator AlpA	N/A
structural_annotation	UHGV-0022331_39	PF12728,MF_01155,TIGR01764,COG3311	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0022331_41	PF01423,MF_00257,NF001963,COG1958	N/A	N/A	N/A	N/A
PHROG	UHGV-0022331_43	phrog_270	99.6	4.3e-29	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0022331_43	UniRef90_UPI001F33ADD3	199.0	0	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0022331_43	663278.Ethha_1883	115.0	4.96e-28	N/A	N/A
Pfam	UHGV-0022331_43	PF13730	N/A	N/A	Helix-turn-helix domain	HTH_36
COG	UHGV-0022331_43	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0022331_43	PF02295,MF_01819,TIGR04176,COG3355	N/A	N/A	N/A	N/A
KOfam	UHGV-0022331_44	K02314	237.5	0	dnaB; replicative DNA helicase [EC:5.6.2.3]	N/A
PHROG	UHGV-0022331_44	phrog_19	228.2	0	DnaB-like replicative helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0022331_44	UniRef90_A0A3D1V9Y4	228.0	0	DNA helicase	N/A
eggNOG-mapper	UHGV-0022331_44	1410665.JNKR01000010_gene1410	145.0	3.18e-36	Participates in initiation and elongation during chromosome replication	N/A
Pfam	UHGV-0022331_44	PF00772	N/A	N/A	DnaB-like helicase N terminal domain	DnaB
Pfam	UHGV-0022331_44	PF03796	N/A	N/A	DnaB-like helicase C terminal domain	DnaB_C
COG	UHGV-0022331_44	COG0305	N/A	N/A	Replicative DNA helicase	N/A
structural_annotation	UHGV-0022331_44	PF03796,PF00772,MF_04155,TIGR00665,COG0305	N/A	N/A	N/A	N/A
KOfam	UHGV-0022331_45	K03496	189.3	0	parA, soj; chromosome partitioning protein	N/A
PHROG	UHGV-0022331_45	phrog_164	161.4	0	ParA-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0022331_45	UniRef90_A0A845R968	305.0	0	ParA family protein	N/A
eggNOG-mapper	UHGV-0022331_45	742738.HMPREF9460_00854	200.0	0	4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family	N/A
Pfam	UHGV-0022331_45	PF13614	N/A	N/A	AAA domain	AAA_31
COG	UHGV-0022331_45	COG1192	N/A	N/A	ParA-like ATPase involved in chromosome/plasmid partitioning or cellulose biosynthesis protein BcsQ	N/A
structural_annotation	UHGV-0022331_45	PF13614,MF_00533,TIGR03453,COG1192	N/A	N/A	N/A	N/A
KOfam	UHGV-0022331_46	K03497	78.8	1e-22	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	N/A
PHROG	UHGV-0022331_46	phrog_27290	344.2	0	N/A	unknown function
UniRef90	UHGV-0022331_46	UniRef90_G4L1G7	313.0	0	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0022331_46	693746.OBV_19860	313.0	0	ParB-like nuclease domain	N/A
Pfam	UHGV-0022331_46	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
COG	UHGV-0022331_46	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-0022331_46	PF12961,PF02195,MF_02015,MF_00684,TIGR04285,NF003443,COG1475,COG3097	N/A	N/A	N/A	N/A
PHROG	UHGV-0022331_48	phrog_10867	61.8	8.9e-18	N/A	unknown function
KOfam	UHGV-0022331_51	K00571	68.4	1.2e-19	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	N/A
PHROG	UHGV-0022331_51	phrog_67	65.4	9.3e-19	DNA methyltransferase	other
UniRef90	UHGV-0022331_51	UniRef90_UPI00055C7461	182.0	0	site-specific DNA-methyltransferase	N/A
eggNOG-mapper	UHGV-0022331_51	1001530.BACE01000005_gene34	89.4	7.57e-18	DNA methylase	N/A
PADLOC	UHGV-0022331_51	MTase_II_00051	77.9	2.6e-22	Type II methyltransferase	RM
Pfam	UHGV-0022331_51	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-0022331_51	COG2189	N/A	N/A	Adenine specific DNA methylase Mod	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0022331	Yes	39,721	55	100	1