vOTU vOTU-075672

vOTU: vOTU-075672

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-075672
Number of genomes	2
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00157 → vSUBFAM-02124 → vGENUS-03970 → vSUBGEN-39076 → vOTU-075672
Host lineage	Bacteria → Firmicutes_A → Clostridia
Host range breadth	Class
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0015981
Biosample ID	SAMEA4766182
Genome length (bp)	39,080 bps
CheckV completeness	99.90% (High-quality)
CDS count	66
CDS density	91.70%
tRNA count	1
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia	Total connections	16	Host agreement	100
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 99.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0015981_2	K07727	50.6	0.000000000000049	K07727; putative transcriptional regulator	N/A
UniRef90	UHGV-0015981_2	UniRef90_UPI000535FBA2	93.2	4.17e-22	helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-0015981_2	33035.JPJF01000055_gene1671	80.5	6.93e-18	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-0015981_2	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0015981_2	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0015981_2	PF13443,MF_00535,NF041951,COG1396	N/A	N/A	N/A	N/A
UniRef90	UHGV-0015981_3	UniRef90_A0A351QWV2	53.9	0.0000000442	Transcriptional regulator	N/A
structural_annotation	UHGV-0015981_3	PF05339,NF041951,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-0015981_6	phrog_643	48.3	0.00000000000015	transcriptional regulator	transcription regulation
PHROG	UHGV-0015981_7	phrog_750	47.5	0.00000000000014	N/A	unknown function
structural_annotation	UHGV-0015981_7	PF03444,COG5045	N/A	N/A	N/A	N/A
KOfam	UHGV-0015981_12	K07741	127.5	2.1e-37	antB; anti-repressor protein	N/A
PHROG	UHGV-0015981_12	phrog_130	251.3	0	anti-repressor Ant	transcription regulation
UniRef90	UHGV-0015981_12	UniRef90_A0A7X0HTD6	308.0	0	Anti-repressor protein	N/A
eggNOG-mapper	UHGV-0015981_12	563192.HMPREF0179_02955	283.0	0	BRO family, N-terminal domain	N/A
Pfam	UHGV-0015981_12	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
Pfam	UHGV-0015981_12	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
COG	UHGV-0015981_12	COG3617	N/A	N/A	Prophage antirepressor	N/A
structural_annotation	UHGV-0015981_12	PF03374,PF02498,TIGR02681,COG3617,COG3645	N/A	N/A	N/A	N/A
Pfam	UHGV-0015981_13	PF12728	N/A	N/A	Helix-turn-helix domain	HTH_17
structural_annotation	UHGV-0015981_13	PF12728,NF040990	N/A	N/A	N/A	N/A
COG	UHGV-0015981_16	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
PHROG	UHGV-0015981_18	phrog_757	204.3	0	DNA methyltransferase	other
UniRef90	UHGV-0015981_18	UniRef90_A0A371AZL8	336.0	0	DNA cytosine methyltransferase	N/A
eggNOG-mapper	UHGV-0015981_18	1195236.CTER_1773	285.0	0	DNA (cytosine-5-)-methyltransferase activity	N/A
COG	UHGV-0015981_18	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-0015981_18	PF00145,MF_01872,TIGR00675,COG0270	N/A	N/A	N/A	N/A
PHROG	UHGV-0015981_20	phrog_5781	89.9	2.8e-26	N/A	unknown function
UniRef90	UHGV-0015981_20	UniRef90_A0A1E7YUN9	90.5	1.6e-21	Nucleoside 2-deoxyribosyltransferase	N/A
eggNOG-mapper	UHGV-0015981_20	630626.EBL_c22110	84.7	4.66e-20	N/A	N/A
Pfam	UHGV-0015981_20	PF14359	N/A	N/A	N/A	DUF4406
COG	UHGV-0015981_20	COG3613	N/A	N/A	Nucleoside 2-deoxyribosyltransferase	N/A
structural_annotation	UHGV-0015981_20	PF14359,MF_03036,TIGR02133,COG3613	N/A	N/A	N/A	N/A
PHROG	UHGV-0015981_22	phrog_434	286.8	0	RecE-like recombination exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0015981_22	UniRef90_A0A3N0HYK4	243.0	0	Endonuclease	N/A
eggNOG-mapper	UHGV-0015981_22	428125.CLOLEP_01823	242.0	0	YqaJ viral recombinase family	N/A
Pfam	UHGV-0015981_22	PF09588	N/A	N/A	YqaJ-like viral recombinase domain	YqaJ
NCBIFam	UHGV-0015981_22	TIGR03033.1	N/A	N/A	putative phage-type endonuclease	N/A
COG	UHGV-0015981_22	COG5377	N/A	N/A	Phage-related protein, predicted endonuclease	N/A
structural_annotation	UHGV-0015981_22	PF09588,MF_03030,TIGR03033,COG5377	N/A	N/A	N/A	N/A
PHROG	UHGV-0015981_23	phrog_23155	144.7	4.59626e-43	N/A	unknown function
eggNOG-mapper	UHGV-0015981_23	350688.Clos_1293	118.0	8.59e-30	N/A	N/A
structural_annotation	UHGV-0015981_23	PF18897	N/A	N/A	N/A	N/A
PHROG	UHGV-0015981_24	phrog_16304	55.2	0.0000000000000015	N/A	unknown function
Pfam	UHGV-0015981_24	PF19808	N/A	N/A	N/A	DUF6291
structural_annotation	UHGV-0015981_24	PF19808	N/A	N/A	N/A	N/A
KOfam	UHGV-0015981_25	K03700	93.9	2.4e-27	recU; recombination protein U	N/A
PHROG	UHGV-0015981_25	phrog_843	95.6	3.3e-28	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0015981_25	UniRef90_A0A327ZS43	79.7	0.00000000000000218	Holliday junction resolvase RecU	N/A
Pfam	UHGV-0015981_25	PF03838	N/A	N/A	Recombination protein U	RecU
COG	UHGV-0015981_25	COG3331	N/A	N/A	Penicillin-binding protein-related factor A, putative recombinase	N/A
KOfam	UHGV-0015981_30	K03111	126.4	3.7e-37	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0015981_30	phrog_44	118.6	5.7e-35	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0015981_30	UniRef90_A0A316RPH6	119.0	1.73e-32	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0015981_30	887929.HMP0721_1845	114.0	4.45e-31	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-0015981_30	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0015981_30	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0015981_30	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0015981_30	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
KOfam	UHGV-0015981_31	K03465	192.2	0	thyX, thy1; thymidylate synthase (FAD) [EC:2.1.1.148]	N/A
PHROG	UHGV-0015981_31	phrog_85	153.6	1.4013e-45	thymidylate synthase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0015981_31	UniRef90_A0A7C6HU70	250.0	0	FAD-dependent thymidylate synthase	N/A
eggNOG-mapper	UHGV-0015981_31	720554.Clocl_3035	233.0	0	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant	N/A
Pfam	UHGV-0015981_31	PF02511	N/A	N/A	Thymidylate synthase complementing protein	Thy1
NCBIFam	UHGV-0015981_31	TIGR02170.1	N/A	N/A	FAD-dependent thymidylate synthase	N/A
COG	UHGV-0015981_31	COG1351	N/A	N/A	Thymidylate synthase ThyX, FAD-dependent family	N/A
structural_annotation	UHGV-0015981_31	PF02511,MF_01408,TIGR02170,COG1351	N/A	N/A	N/A	N/A
PHROG	UHGV-0015981_33	phrog_119	59.7	4.5e-17	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0015981_33	UniRef90_A0A844FER8	106.0	3.95e-28	HNH endonuclease	N/A
eggNOG-mapper	UHGV-0015981_33	290402.Cbei_0903	103.0	1.69e-27	HNH nucleases	N/A
Pfam	UHGV-0015981_33	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-0015981_33	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
PHROG	UHGV-0015981_34	phrog_1066	86.1	3.5e-25	N/A	unknown function
eggNOG-mapper	UHGV-0015981_34	1094508.Tsac_2428	97.8	1.01e-24	N/A	N/A
structural_annotation	UHGV-0015981_34	PF05119,TIGR01558	N/A	N/A	N/A	N/A
PHROG	UHGV-0015981_35	phrog_9	395.9	0	terminase large subunit	head and packaging
UniRef90	UHGV-0015981_35	UniRef90_A0A177L6C1	600.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0015981_35	315730.BcerKBAB4_3431	581.0	0	Terminase	N/A
Pfam	UHGV-0015981_35	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0015981_35	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0015981_35	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0015981_35	PF20441,PF03354,MF_04145,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0015981_36	phrog_12	150.4	8.40779e-45	portal protein	head and packaging
UniRef90	UHGV-0015981_36	UniRef90_A0A1H4BNH5	307.0	0	Phage portal protein, HK97 family	N/A
eggNOG-mapper	UHGV-0015981_36	1094508.Tsac_2426	199.0	0	Portal protein	N/A
Pfam	UHGV-0015981_36	PF04860	N/A	N/A	Phage portal protein	Phage_portal
COG	UHGV-0015981_36	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0015981_36	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-0015981_37	K06904	116.4	3.3e-34	N/A	N/A
PHROG	UHGV-0015981_37	phrog_80	135.7	4.1e-40	head maturation protease	head and packaging
UniRef90	UHGV-0015981_37	UniRef90_R6CCZ0	223.0	0	Phage prohead protease HK97 family	N/A
eggNOG-mapper	UHGV-0015981_37	324057.Pjdr2_1542	197.0	0	Caudovirus prohead serine protease	N/A
Pfam	UHGV-0015981_37	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
NCBIFam	UHGV-0015981_37	TIGR01543.1	N/A	N/A	HK97 family phage prohead protease	N/A
COG	UHGV-0015981_37	COG3740	N/A	N/A	Phage head maturation protease	N/A
structural_annotation	UHGV-0015981_37	PF04586,TIGR01543,COG3740	N/A	N/A	N/A	N/A
PHROG	UHGV-0015981_38	phrog_10	73.3	3.5e-21	major head protein	head and packaging
UniRef90	UHGV-0015981_38	UniRef90_A0A316QDD0	374.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-0015981_38	742740.HMPREF9474_04304	228.0	0	Phage capsid family	N/A
Pfam	UHGV-0015981_38	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0015981_38	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
structural_annotation	UHGV-0015981_38	PF05065,PF09032,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0015981_39	phrog_5223	45.9	0.00000000000073	neck protein	connector
eggNOG-mapper	UHGV-0015981_39	1134413.ANNK01000054_gene2236	47.8	0.0000086	N/A	N/A
PHROG	UHGV-0015981_40	phrog_1951	65.0	9.1e-19	head-tail adaptor	connector
UniRef90	UHGV-0015981_40	UniRef90_A0A2V2GTA0	51.2	0.00000458	Phage head-tail adapter protein	N/A
eggNOG-mapper	UHGV-0015981_40	1033738.CAEP01000018_gene3675	54.3	0.0000000452	head-tail adaptor	N/A
COG	UHGV-0015981_40	COG5614	N/A	N/A	Phage head-tail adaptor	N/A
structural_annotation	UHGV-0015981_40	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0015981_41	phrog_5	42.2	0.000000000017	tail completion or Neck1 protein	connector
UniRef90	UHGV-0015981_41	UniRef90_A0A658JX18	64.3	0.000000000249	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0015981_41	411470.RUMGNA_02071	66.2	0.00000000000909	N/A	N/A
structural_annotation	UHGV-0015981_41	TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-0015981_43	phrog_88	83.2	3e-24	major tail protein	tail
NCBIFam	UHGV-0015981_43	TIGR01603.1	N/A	N/A	major tail protein	N/A
COG	UHGV-0015981_43	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0015981_43	PF04630,TIGR01603,COG3498	N/A	N/A	N/A	N/A
UniRef90	UHGV-0015981_44	UniRef90_UPI0012ABA090	95.5	7.52e-25	ribbon-helix-helix protein, CopG family	N/A
eggNOG-mapper	UHGV-0015981_44	478749.BRYFOR_07643	75.1	1.63e-17	N/A	N/A
structural_annotation	UHGV-0015981_44	PF12651,NF041793,COG4710	N/A	N/A	N/A	N/A
KOfam	UHGV-0015981_46	K07741	63.1	8.6e-18	antB; anti-repressor protein	N/A
PHROG	UHGV-0015981_46	phrog_130	210.0	0	anti-repressor Ant	transcription regulation
UniRef90	UHGV-0015981_46	UniRef90_A0A6L6TNB8	262.0	0	Bro-N domain-containing protein	N/A
eggNOG-mapper	UHGV-0015981_46	663952.SDD27957_09050	231.0	0	COG3617 Prophage antirepressor	N/A
Pfam	UHGV-0015981_46	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
Pfam	UHGV-0015981_46	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
COG	UHGV-0015981_46	COG3617	N/A	N/A	Prophage antirepressor	N/A
structural_annotation	UHGV-0015981_46	PF02498,PF03374,TIGR02681,COG3645,COG3561	N/A	N/A	N/A	N/A
PHROG	UHGV-0015981_50	phrog_1533	299.3	0	tail length tape measure protein	tail
UniRef90	UHGV-0015981_50	UniRef90_A0A6S6X9X3	193.0	0	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-0015981_50	568816.Acin_1333	227.0	0	Phage-related minor tail protein	N/A
Pfam	UHGV-0015981_50	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
NCBIFam	UHGV-0015981_50	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
COG	UHGV-0015981_50	COG5283	N/A	N/A	Phage-related tail protein	N/A
structural_annotation	UHGV-0015981_50	PF10145,TIGR01760,TIGR01843,COG5280	N/A	N/A	N/A	N/A
PHROG	UHGV-0015981_51	phrog_33	79.2	8.3e-23	distal tail protein Dit	tail
UniRef90	UHGV-0015981_51	UniRef90_A0A7C6FS63	153.0	1.10983e-42	Phage tail protein	N/A
eggNOG-mapper	UHGV-0015981_51	994573.T472_0211980	140.0	2.02e-38	tail component	N/A
COG	UHGV-0015981_51	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0015981_51	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0015981_52	phrog_1067	222.5	0	minor head protein	head and packaging
eggNOG-mapper	UHGV-0015981_52	1443122.Z958_06055	150.0	1.01e-34	Phage minor structural protein	N/A
Pfam	UHGV-0015981_52	PF08239	N/A	N/A	Bacterial SH3 domain	SH3_3
Pfam	UHGV-0015981_52	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-0015981_52	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0015981_52	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0015981_52	PF14594,PF06848,TIGR01665,COG4926	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0015981_53	PF16640	N/A	N/A	N/A	N/A
KOfam	UHGV-0015981_55	K21470	47.5	0.00000000000015	ycbB; L,D-transpeptidase YcbB	N/A
PHROG	UHGV-0015981_55	phrog_1493	75.8	6.2e-22	endolysin	lysis
UniRef90	UHGV-0015981_55	UniRef90_A0A1V5Q5W6	303.0	0	Putative peptidoglycan binding domain protein	N/A
eggNOG-mapper	UHGV-0015981_55	1246484.D479_19733	85.5	8.04e-16	Ami_3	N/A
Pfam	UHGV-0015981_55	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
COG	UHGV-0015981_55	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0015981_55	PF18342,PF01471,PF00877,NF038080,COG4991,COG3409,COG0791	N/A	N/A	N/A	N/A
PHROG	UHGV-0015981_56	phrog_199	95.1	6.9e-28	holin	lysis
UniRef90	UHGV-0015981_56	UniRef90_A0A7C6FMM1	179.0	0	Phage holin family protein	N/A
eggNOG-mapper	UHGV-0015981_56	1216932.CM240_0689	166.0	0	toxin secretion phage lysis holin	N/A
Pfam	UHGV-0015981_56	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-0015981_56	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
COG	UHGV-0015981_56	COG4824	N/A	N/A	Phage-related holin (Lysis protein)	N/A
structural_annotation	UHGV-0015981_56	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
KOfam	UHGV-0015981_61	K22300	57.9	2.3e-16	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0015981_61	phrog_8	54.5	0.0000000000000029	transcriptional regulator	transcription regulation
UniRef90	UHGV-0015981_61	UniRef90_A0A6N2WGH6	61.6	0.0000000000384	HTH-type transcriptional regulator ImmR	N/A
eggNOG-mapper	UHGV-0015981_61	431943.CKL_1947	60.5	0.000000000446	sequence-specific DNA binding	N/A
PADLOC	UHGV-0015981_61	retron_type_VI_hth_cluster2_1	42.6	0.000000000016	N/A	Retron
Pfam	UHGV-0015981_61	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0015981_61	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0015981_61	PF01381,NF041951,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0015981_65	K14059	232.5	0	int; integrase	N/A
PHROG	UHGV-0015981_65	phrog_1	213.8	0	integrase	integration and excision
UniRef90	UHGV-0015981_65	UniRef90_UPI001C0F402D	165.0	7.70714e-44	site-specific integrase	N/A
eggNOG-mapper	UHGV-0015981_65	887929.HMP0721_1295	143.0	1.8e-36	Phage integrase, N-terminal SAM-like domain	N/A
Pfam	UHGV-0015981_65	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-0015981_65	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0015981_65	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0015981_65	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
UniRef90	UHGV-0015981_66	UniRef90_A0A1Q6SAI0	76.3	0.00000000000000878	HTH cro/C1-type domain-containing protein	N/A
Pfam	UHGV-0015981_66	PF13560	N/A	N/A	Helix-turn-helix domain	HTH_31
COG	UHGV-0015981_66	COG4636	N/A	N/A	Endonuclease, Uma2 family (restriction endonuclease fold)	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0015981	Yes	39,080	57	100	1
UHGV-0011637	No	19,566	58	52	1