vOTU vOTU-075977

vOTU: vOTU-075977

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-075977
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00025 → vSUBFAM-06833 → vGENUS-17990 → vSUBGEN-33837 → vOTU-075977
Host lineage	Bacteria → Firmicutes_A → Clostridia
Host range breadth	Class
Lifestyle	temperate (evidence: integrase)

Representative genome
Genome ID	UHGV-1472466
Biosample ID	SAMN02333950
Genome length (bp)	40,744 bps
CheckV completeness	99.90% (High-quality)
CDS count	54
CDS density	95.51%
tRNA count	0
Integrase	Yes
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia	Total connections	17	Host agreement	100
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 99.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-1472466_2	K16628	56.5	8.9e-17	COL7A; collagen type VII alpha	N/A
PHROG	UHGV-1472466_2	phrog_25979	48.5	0.000000000000012	N/A	unknown function
Pfam	UHGV-1472466_2	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
structural_annotation	UHGV-1472466_3	PF17790,NF011770	N/A	N/A	N/A	N/A
PHROG	UHGV-1472466_6	phrog_267	80.6	1.8e-23	major head protein	head and packaging
UniRef90	UHGV-1472466_6	UniRef90_UPI0018C21AC0	137.0	2e-35	coat protein	N/A
eggNOG-mapper	UHGV-1472466_6	1232449.BAHV02000016_gene1819	206.0	0	P22 coat protein-protein 5 domain protein	N/A
structural_annotation	UHGV-1472466_6	PF19821,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1472466_8	phrog_156	87.1	3.8e-27	portal protein	head and packaging
eggNOG-mapper	UHGV-1472466_8	445971.ANASTE_00716	414.0	0	N/A	N/A
structural_annotation	UHGV-1472466_8	PF16510,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-1472466_10	K06909	234.8	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1472466_10	phrog_3717	212.9	0	terminase large subunit	head and packaging
UniRef90	UHGV-1472466_10	UniRef90_A0A3B8SUX3	603.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1472466_10	445971.ANASTE_00711	551.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-1472466_10	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
NCBIFam	UHGV-1472466_10	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-1472466_10	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1472466_10	PF04466,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
KOfam	UHGV-1472466_11	K07474	48.1	0.00000000000034	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-1472466_11	phrog_51	60.4	7e-18	terminase small subunit	head and packaging
UniRef90	UHGV-1472466_11	UniRef90_A0A412AXK9	81.6	2.93e-17	Terminase	N/A
eggNOG-mapper	UHGV-1472466_11	387092.NIS_0464	79.0	3.9e-17	Terminase small subunit	N/A
Pfam	UHGV-1472466_11	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-1472466_11	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-1472466_11	PF03592,COG3728	N/A	N/A	N/A	N/A
PHROG	UHGV-1472466_12	phrog_7339	146.7	1.30321e-43	DNA repair exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1472466_12	UniRef90_A0A8F2F0X6	290.0	0	Metallophosphoesterase	N/A
eggNOG-mapper	UHGV-1472466_12	443254.Marpi_0340	115.0	2.18e-28	metallophosphoesterase	N/A
Pfam	UHGV-1472466_12	PF00149	N/A	N/A	Calcineurin-like phosphoesterase	Metallophos
COG	UHGV-1472466_12	COG1408	N/A	N/A	Predicted phosphohydrolase, MPP superfamily	N/A
structural_annotation	UHGV-1472466_12	PF12850,MF_00325,NF003118,COG1311	N/A	N/A	N/A	N/A
PHROG	UHGV-1472466_13	phrog_36	61.5	1.7e-17	transcriptional regulator	transcription regulation
UniRef90	UHGV-1472466_13	UniRef90_UPI0004E18681	53.1	0.00000337	N/A	N/A
eggNOG-mapper	UHGV-1472466_13	1408311.JNJM01000040_gene948	53.1	0.000000565	N/A	N/A
COG	UHGV-1472466_13	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-1472466_13	PF07374,MF_00674,NF008895,COG1342	N/A	N/A	N/A	N/A
UniRef90	UHGV-1472466_18	UniRef90_A0A098GES5	102.0	1.9e-26	Putative phage associated protein	N/A
structural_annotation	UHGV-1472466_18	PF01423,MF_00257,NF001963,COG1958	N/A	N/A	N/A	N/A
KOfam	UHGV-1472466_19	K07483	43.6	0.0000000000075	K07483; transposase	N/A
Pfam	UHGV-1472466_19	PF01527	N/A	N/A	Transposase	HTH_Tnp_1
COG	UHGV-1472466_19	COG2963	N/A	N/A	Transposase InsE and inactivated derivatives	N/A
PHROG	UHGV-1472466_20	phrog_6721	279.7	0	N/A	unknown function
eggNOG-mapper	UHGV-1472466_20	537007.BLAHAN_05521	266.0	0	N/A	N/A
structural_annotation	UHGV-1472466_20	PF02511,MF_01408,TIGR02170,COG1351	N/A	N/A	N/A	N/A
PHROG	UHGV-1472466_21	phrog_18716	185.9	0	N/A	unknown function
UniRef90	UHGV-1472466_21	UniRef90_R6RP50	202.0	0	N/A	N/A
eggNOG-mapper	UHGV-1472466_21	665959.HMPREF1013_00856	138.0	7.23995e-41	N/A	N/A
Pfam	UHGV-1472466_21	PF18909	N/A	N/A	dATP/dGTP diphosphohydrolase, N-terminal	dGTP_diPhyd_N
structural_annotation	UHGV-1472466_21	PF18909	N/A	N/A	N/A	N/A
PHROG	UHGV-1472466_22	phrog_59	129.7	1.1e-38	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1472466_22	UniRef90_UPI0015938EFB	121.0	2.17e-31	NUMOD4 domain-containing protein	N/A
eggNOG-mapper	UHGV-1472466_22	1208587.S6CQN3_9CAUD	111.0	2.47e-28	HNH endonuclease	N/A
PADLOC	UHGV-1472466_22	HEase_00016	89.6	6.2e-26	homing endonuclease	RM
Pfam	UHGV-1472466_22	PF07463	N/A	N/A	NUMOD4 motif	NUMOD4
structural_annotation	UHGV-1472466_22	PF07463,PF07453,TIGR01453	N/A	N/A	N/A	N/A
PHROG	UHGV-1472466_23	phrog_9804	123.0	2e-36	N/A	unknown function
UniRef90	UHGV-1472466_23	UniRef90_A0A174S716	204.0	0	Inhibitor_G39P domain-containing protein	N/A
eggNOG-mapper	UHGV-1472466_23	585394.RHOM_14005	117.0	6.63e-31	Loader and inhibitor of phage G40P	N/A
AcrCatalog	UHGV-1472466_23	cluster_137185	103.0	2.49e-30	NA	N/A
Pfam	UHGV-1472466_23	PF11417	N/A	N/A	Loader and inhibitor of phage G40P	Inhibitor_G39P
structural_annotation	UHGV-1472466_23	PF11417	N/A	N/A	N/A	N/A
PHROG	UHGV-1472466_24	phrog_4880	175.5	0	replisome organizer	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1472466_24	UniRef90_R6WQA7	228.0	0	DnaD and phage-associated domain protein	N/A
eggNOG-mapper	UHGV-1472466_24	411470.RUMGNA_02197	219.0	0	phage replisome	N/A
Pfam	UHGV-1472466_24	PF09681	N/A	N/A	N-terminal phage replisome organiser (Phage_rep_org_N)	Phage_rep_org_N
NCBIFam	UHGV-1472466_24	TIGR01714.1	N/A	N/A	phage replisome organizer, putative, N-terminal region	N/A
structural_annotation	UHGV-1472466_24	PF09681,TIGR01714,COG3388	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1472466_26	1203606.HMPREF1526_01684	102.0	8.84e-27	N/A	N/A
PHROG	UHGV-1472466_27	phrog_244	83.2	3.6e-24	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1472466_27	UniRef90_A0A841R0Q1	123.0	2.64e-34	Holliday junction resolvase	N/A
eggNOG-mapper	UHGV-1472466_27	887929.HMP0721_1279	117.0	1.76e-32	N/A	N/A
structural_annotation	UHGV-1472466_27	PF01870,MF_01490,NF040854,COG1591	N/A	N/A	N/A	N/A
KOfam	UHGV-1472466_29	K03111	140.9	1.29998e-41	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1472466_29	phrog_44	137.7	6.79994e-41	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1472466_29	UniRef90_R7EVC4	156.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1472466_29	720554.Clocl_4133	137.0	8.20001e-40	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-1472466_29	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1472466_29	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1472466_29	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1472466_29	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1472466_29	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-1472466_30	phrog_7566	102.3	2.2e-30	N/A	unknown function
eggNOG-mapper	UHGV-1472466_30	97139.C824_05985	78.6	1.56e-17	N/A	N/A
PHROG	UHGV-1472466_31	phrog_72	57.8	1.7e-16	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1472466_31	UniRef90_A0A285PU94	110.0	2.62e-27	Recombinase NinB	N/A
eggNOG-mapper	UHGV-1472466_31	1304866.K413DRAFT_1197	105.0	1.91e-26	N/A	N/A
PHROG	UHGV-1472466_32	phrog_14970	218.5	0	N/A	unknown function
UniRef90	UHGV-1472466_32	UniRef90_UPI00164BFA28	208.0	0	Rad52/Rad22 family DNA repair protein	N/A
eggNOG-mapper	UHGV-1472466_32	411470.RUMGNA_02193	171.0	0	double-strand break repair protein	N/A
Pfam	UHGV-1472466_32	PF04098	N/A	N/A	Rad52/22 family double-strand break repair protein	Rad52_Rad22
COG	UHGV-1472466_32	COG4712	N/A	N/A	Predicted ssDNA annealing protein, contains HHH motif, Rad42/Rad22/RecT/erf family	N/A
structural_annotation	UHGV-1472466_32	PF04098,TIGR00607,COG4712	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1472466_35	PF00412	N/A	N/A	N/A	N/A
KOfam	UHGV-1472466_36	K00558	233.9	0	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-1472466_36	phrog_116	251.1	0	DNA methyltransferase	other
UniRef90	UHGV-1472466_36	UniRef90_UPI000DE4F8FA	348.0	0	DNA (cytosine-5-)-methyltransferase	N/A
eggNOG-mapper	UHGV-1472466_36	411490.ANACAC_02374	263.0	0	N/A	N/A
PADLOC	UHGV-1472466_36	MTase_II_00058	224.9	0	Type II methyltransferase	RM
Pfam	UHGV-1472466_36	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
NCBIFam	UHGV-1472466_36	TIGR00675.1	N/A	N/A	DNA (cytosine-5-)-methyltransferase	N/A
COG	UHGV-1472466_36	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-1472466_36	PF00145,MF_01857,TIGR00675,COG0270	N/A	N/A	N/A	N/A
PHROG	UHGV-1472466_38	phrog_8	41.4	0.000000000029	transcriptional regulator	transcription regulation
UniRef90	UHGV-1472466_38	UniRef90_A0A7X1LVY3	68.6	0.000000000000853	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-1472466_38	742738.HMPREF9460_02485	60.1	0.000000000275	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-1472466_38	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
COG	UHGV-1472466_38	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
KOfam	UHGV-1472466_41	K06400	276.1	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-1472466_41	phrog_95	274.5	0	integrase	integration and excision
UniRef90	UHGV-1472466_41	UniRef90_A0A1C5R4R0	551.0	0	Transposase and inactivated derivatives	N/A
eggNOG-mapper	UHGV-1472466_41	999413.HMPREF1094_00247	259.0	0	Recombinase	N/A
Pfam	UHGV-1472466_41	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-1472466_41	PF07508	N/A	N/A	Recombinase	Recombinase
COG	UHGV-1472466_41	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-1472466_41	PF07508,PF00239,NF041201,COG1961	N/A	N/A	N/A	N/A
KOfam	UHGV-1472466_44	K01448	79.5	4e-23	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-1472466_44	phrog_435	121.9	6.1e-36	endolysin	lysis
UniRef90	UHGV-1472466_44	UniRef90_UPI000287BA03	149.0	2.36e-40	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-1472466_44	665950.HMPREF1025_02673	159.0	2.87266e-43	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase	N/A
Pfam	UHGV-1472466_44	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
COG	UHGV-1472466_44	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
PHROG	UHGV-1472466_45	phrog_443	55.1	0.000000000000002	holin	lysis
UniRef90	UHGV-1472466_45	UniRef90_UPI000BA3B743	99.0	1.15e-25	holin	N/A
eggNOG-mapper	UHGV-1472466_45	476272.RUMHYD_01759	92.4	9.11e-24	Putative lactococcus lactis phage r1t holin	N/A
Pfam	UHGV-1472466_45	PF16945	N/A	N/A	Putative lactococcus lactis phage r1t holin	Phage_r1t_holin
structural_annotation	UHGV-1472466_45	PF16945	N/A	N/A	N/A	N/A
PHROG	UHGV-1472466_47	phrog_372	251.2	0	tail protein	tail
UniRef90	UHGV-1472466_47	UniRef90_UPI00067EAD4C	204.0	0	N/A	N/A
eggNOG-mapper	UHGV-1472466_47	1211844.CBLM010000016_gene1479	199.0	0	N/A	N/A
Pfam	UHGV-1472466_47	PF05895	N/A	N/A	N/A	DUF859
structural_annotation	UHGV-1472466_47	PF05895,MF_04116,NF010681,COG3291	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1472466_48	1211844.CBLM010000016_gene1480	60.1	0.0000000783	cellulase activity	N/A
COG	UHGV-1472466_48	COG4733	N/A	N/A	Phage-related protein, tail protein J	N/A
UniRef90	UHGV-1472466_49	UniRef90_A0A8D9UHE1	367.0	0	PolyVal ADP-ribosyltransferase	N/A
eggNOG-mapper	UHGV-1472466_49	1408437.JNJN01000060_gene452	406.0	0	heme binding	N/A
Pfam	UHGV-1472466_49	PF18760	N/A	N/A	ADP-Ribosyltransferase in polyvalent proteins	ART-PolyVal
COG	UHGV-1472466_49	COG0503	N/A	N/A	Adenine/guanine phosphoribosyltransferase or related PRPP-binding protein	N/A
PHROG	UHGV-1472466_51	phrog_3287	43.5	0.0000000000000032	virion structural protein	head and packaging
UniRef90	UHGV-1472466_51	UniRef90_UPI001407F823	155.0	6.09e-37	N/A	N/A
eggNOG-mapper	UHGV-1472466_51	445971.ANASTE_00721	322.0	0	N/A	N/A
structural_annotation	UHGV-1472466_51	PF11134,MF_01282,TIGR03300,COG5276	N/A	N/A	N/A	N/A
PHROG	UHGV-1472466_52	phrog_13046	61.4	1.1e-17	N/A	unknown function
structural_annotation	UHGV-1472466_52	PF20387	N/A	N/A	N/A	N/A
KOfam	UHGV-1472466_54	K16617	44.9	0.00000000000072	COL13A; collagen type XIII alpha	N/A
PHROG	UHGV-1472466_54	phrog_6320	55.5	8.7e-16	tail fiber protein	tail
eggNOG-mapper	UHGV-1472466_54	665956.HMPREF1032_02936	66.2	0.0000000000634	N/A	N/A
Pfam	UHGV-1472466_54	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1472466	Yes	40,744	46	100	1