vOTU vOTU-076019

vOTU: vOTU-076019

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-076019
Number of genomes	5
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00003 → vSUBFAM-04940 → vGENUS-09629 → vSUBGEN-11600 → vOTU-076019
Host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Anaerotignaceae → Metalachnospira → Metalachnospira sp900546215
Host range breadth	Species
Lifestyle	temperate (evidence: geNomad)

Representative genome
Genome ID	UHGV-0146683
Biosample ID	SAMN05545052
Genome length (bp)	40,303 bps
CheckV completeness	94.98% (High-quality)
CDS count	50
CDS density	93.02%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	PHIST
CRISPR-predicted host lineage		Total connections		Host agreement
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Anaerotignaceae → Metalachnospira → Metalachnospira sp900546215	Total connections	8	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 94.98)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0146683_1	phrog_9854	116.6	5.5e-39	N/A	unknown function
UniRef90	UHGV-0146683_1	UniRef90_A0A831TEP0	153.0	2.54e-33	LPD38 domain-containing protein	N/A
eggNOG-mapper	UHGV-0146683_1	1121091.AUMP01000003_gene2597	284.0	0	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis	N/A
Pfam	UHGV-0146683_1	PF18798	N/A	N/A	Large polyvalent protein-associated domain 3	LPD3
Pfam	UHGV-0146683_1	PF18857	N/A	N/A	Large polyvalent protein associated domain 38	LPD38
COG	UHGV-0146683_1	COG0503	N/A	N/A	Adenine/guanine phosphoribosyltransferase or related PRPP-binding protein	N/A
structural_annotation	UHGV-0146683_2	PF09486,NF038305	N/A	N/A	N/A	N/A
KOfam	UHGV-0146683_3	K01447	111.1	1.4e-32	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0146683_3	phrog_670	141.3	8.59977e-42	endolysin	lysis
UniRef90	UHGV-0146683_3	UniRef90_A0A7X9GAJ0	243.0	0	N-acetylmuramoyl-L-alanine amidase domain-containing protein (Fragment)	N/A
eggNOG-mapper	UHGV-0146683_3	1121335.Clst_0714	167.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-0146683_3	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
COG	UHGV-0146683_3	COG5632	N/A	N/A	N-acetylmuramoyl-L-alanine amidase CwlA	N/A
structural_annotation	UHGV-0146683_3	PF01510,NF008758,COG5632	N/A	N/A	N/A	N/A
PHROG	UHGV-0146683_4	phrog_1129	71.5	8.8e-21	holin	lysis
UniRef90	UHGV-0146683_4	UniRef90_UPI001C1096AE	140.0	1.38e-41	phage holin family protein	N/A
eggNOG-mapper	UHGV-0146683_4	702450.CUW_0551	108.0	6.88e-30	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-0146683_4	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0146683_4	PF06946	N/A	N/A	N/A	N/A
PHROG	UHGV-0146683_5	phrog_1863	70.5	1.5e-20	N/A	unknown function
eggNOG-mapper	UHGV-0146683_5	748224.HMPREF9436_01412	100.0	4.33e-27	N/A	N/A
eggNOG-mapper	UHGV-0146683_9	411468.CLOSCI_01507	47.4	0.000000805	Phage uncharacterised protein (Phage_XkdX)	N/A
structural_annotation	UHGV-0146683_9	PF09693,TIGR01669	N/A	N/A	N/A	N/A
KOfam	UHGV-0146683_13	K08131	129.7	1.9e-39	COL9A; collagen type IX alpha	N/A
PHROG	UHGV-0146683_13	phrog_819	137.2	0	tail protein	tail
UniRef90	UHGV-0146683_13	UniRef90_A0A8D9PE13	140.0	1.25e-31	Virion structural protein	N/A
Pfam	UHGV-0146683_13	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
eggNOG-mapper	UHGV-0146683_16	665956.HMPREF1032_03917	518.0	0	N/A	N/A
structural_annotation	UHGV-0146683_16	PF11134,MF_01282,TIGR03300,COG5276	N/A	N/A	N/A	N/A
PHROG	UHGV-0146683_17	phrog_13046	61.5	1.6e-17	N/A	unknown function
eggNOG-mapper	UHGV-0146683_17	693746.OBV_23880	117.0	3.15e-30	N/A	N/A
structural_annotation	UHGV-0146683_17	PF20387	N/A	N/A	N/A	N/A
PHROG	UHGV-0146683_18	phrog_371	130.7	7.5e-39	major head protein	head and packaging
UniRef90	UHGV-0146683_18	UniRef90_UPI001C11985C	508.0	0	Mu-like prophage major head subunit gpT family protein	N/A
eggNOG-mapper	UHGV-0146683_18	1226322.HMPREF1545_03848	285.0	0	N/A	N/A
Pfam	UHGV-0146683_18	PF10124	N/A	N/A	Mu-like prophage major head subunit gpT	Mu-like_gpT
structural_annotation	UHGV-0146683_18	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0146683_19	phrog_24113	55.6	7.9e-16	N/A	unknown function
structural_annotation	UHGV-0146683_19	PF11133,COG5471	N/A	N/A	N/A	N/A
PHROG	UHGV-0146683_20	phrog_35275	51.2	0.000000000000012	N/A	unknown function
eggNOG-mapper	UHGV-0146683_20	693746.OBV_23910	68.9	0.000000000175	N/A	N/A
PHROG	UHGV-0146683_22	phrog_156	241.4	0	portal protein	head and packaging
eggNOG-mapper	UHGV-0146683_22	693746.OBV_23930	475.0	0	N/A	N/A
structural_annotation	UHGV-0146683_22	PF16510,MF_04120,TIGR01542,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-0146683_23	K21523	46.5	3.1e-27	gp17; terminase, large subunit [EC:3.1.-.-]	N/A
PHROG	UHGV-0146683_23	phrog_2	102.7	6e-30	terminase large subunit	head and packaging
UniRef90	UHGV-0146683_23	UniRef90_R5AHR8	586.0	0	Putative terminase large subunit	N/A
eggNOG-mapper	UHGV-0146683_23	693746.OBV_23980	531.0	0	phage Terminase large subunit	N/A
COG	UHGV-0146683_23	COG4373	N/A	N/A	Mu-like prophage FluMu protein gp28	N/A
structural_annotation	UHGV-0146683_23	PF03237,PF17289,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
KOfam	UHGV-0146683_24	K07474	120.0	3.7e-35	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-0146683_24	phrog_51	115.8	1.5e-34	terminase small subunit	head and packaging
UniRef90	UHGV-0146683_24	UniRef90_A0A3R6SWW3	134.0	1.61e-37	Terminase small subunit	N/A
eggNOG-mapper	UHGV-0146683_24	1298920.KI911353_gene4857	130.0	1.67e-36	Terminase small subunit	N/A
Pfam	UHGV-0146683_24	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-0146683_24	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
UniRef90	UHGV-0146683_25	UniRef90_UPI001C117B9F	48.9	0.00000433	Arc family DNA-binding protein	N/A
Pfam	UHGV-0146683_25	PF08681	N/A	N/A	N/A	DUF1778
structural_annotation	UHGV-0146683_25	PF03869,NF010256	N/A	N/A	N/A	N/A
PHROG	UHGV-0146683_26	phrog_15863	162.4	0	N/A	unknown function
UniRef90	UHGV-0146683_26	UniRef90_A0A417HVZ9	168.0	0	J domain-containing protein	N/A
eggNOG-mapper	UHGV-0146683_26	1121342.AUCO01000030_gene2587	129.0	5.44e-36	DnaJ molecular chaperone homology domain	N/A
COG	UHGV-0146683_26	COG2214	N/A	N/A	Curved DNA-binding protein CbpA, contains a DnaJ-like domain	N/A
UniRef90	UHGV-0146683_28	UniRef90_A0A2K4ZGQ9	72.0	0.000000000000017	DarA_C domain-containing protein	N/A
structural_annotation	UHGV-0146683_29	PF17917	N/A	N/A	N/A	N/A
PHROG	UHGV-0146683_30	phrog_36	70.6	2.6e-20	transcriptional regulator	transcription regulation
UniRef90	UHGV-0146683_30	UniRef90_A0A174WV03	76.6	0.00000000000000493	FliA/WhiG subfamily RNA polymerase sigma-28 subunit	N/A
eggNOG-mapper	UHGV-0146683_30	97138.C820_00221	94.0	1.54e-22	sigma factor activity	N/A
Pfam	UHGV-0146683_30	PF04545	N/A	N/A	Sigma-70, region 4	Sigma70_r4
COG	UHGV-0146683_30	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-0146683_30	PF07374,MF_00674,NF005248,COG2739	N/A	N/A	N/A	N/A
KOfam	UHGV-0146683_33	K00390	113.4	9.2e-34	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	N/A
PHROG	UHGV-0146683_33	phrog_424	130.5	1.1e-38	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0146683_33	UniRef90_UPI0015934DC8	360.0	0	phosphoadenosine phosphosulfate reductase family protein	N/A
eggNOG-mapper	UHGV-0146683_33	411490.ANACAC_02386	343.0	0	Phosphoadenosine phosphosulfate reductase	N/A
PADLOC	UHGV-0146683_33	BrxP_00001	68.0	3.7e-22	BrxP	BREX
Pfam	UHGV-0146683_33	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-0146683_33	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-0146683_33	PF01507,MF_00063,NF010369,COG0175	N/A	N/A	N/A	N/A
KOfam	UHGV-0146683_35	K01160	51.1	0.00000000000004	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-0146683_35	phrog_140	100.9	1.4e-29	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0146683_35	UniRef90_UPI000A53983E	206.0	0	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-0146683_35	478749.BRYFOR_07588	190.0	0	endodeoxyribonuclease RusA	N/A
Pfam	UHGV-0146683_35	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-0146683_35	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-0146683_35	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
KOfam	UHGV-0146683_36	K07505	434.6	0	repA; regulatory protein RepA	N/A
PHROG	UHGV-0146683_36	phrog_2597	1218.9	0	DNA primase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0146683_36	UniRef90_A0A1C6CSE0	1102.0	0	Regulatory protein repA	N/A
eggNOG-mapper	UHGV-0146683_36	394503.Ccel_3304	1082.0	0	Primase C terminal 2 (PriCT-2)	N/A
Pfam	UHGV-0146683_36	PF08707	N/A	N/A	Primase C terminal 2 (PriCT-2)	PriCT_2
Pfam	UHGV-0146683_36	PF13481	N/A	N/A	AAA domain	AAA_25
COG	UHGV-0146683_36	COG3598	N/A	N/A	RecA-family ATPase	N/A
structural_annotation	UHGV-0146683_36	PF13481,PF16793,PF08220,MF_00350,MF_00700,NF006606,NF001641,COG3598,COG3285	N/A	N/A	N/A	N/A
KOfam	UHGV-0146683_37	K17677	352.4	0	IRC3; ATP-dependent helicase IRC3 [EC:5.6.2.-]	N/A
PHROG	UHGV-0146683_37	phrog_16	281.5	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0146683_37	UniRef90_A0A3D5UFA3	863.0	0	DEAD/DEAH box helicase	N/A
eggNOG-mapper	UHGV-0146683_37	1235792.C808_05388	850.0	0	helicase superfamily c-terminal domain	N/A
PADLOC	UHGV-0146683_37	mREase_IV_00005	142.3	4.49957e-42	Type IV methyl-directed restriction enzyme	RM
Pfam	UHGV-0146683_37	PF04851	N/A	N/A	Type III restriction enzyme, res subunit	ResIII
Pfam	UHGV-0146683_37	PF00271	N/A	N/A	Helicase conserved C-terminal domain	Helicase_C
COG	UHGV-0146683_37	COG1061	N/A	N/A	Superfamily II DNA or RNA helicase	N/A
structural_annotation	UHGV-0146683_37	PF04851,PF16203,MF_01489,NF008521,COG1061	N/A	N/A	N/A	N/A
PHROG	UHGV-0146683_38	phrog_2698	200.7	0	N/A	unknown function
UniRef90	UHGV-0146683_38	UniRef90_A0A6A7K9A2	209.0	0	N/A	N/A
eggNOG-mapper	UHGV-0146683_38	394503.Ccel_3308	204.0	0	N/A	N/A
structural_annotation	UHGV-0146683_38	PF05037	N/A	N/A	N/A	N/A
PHROG	UHGV-0146683_39	phrog_124	232.6	0	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0146683_39	UniRef90_UPI001E57C8F5	453.0	0	ATP-binding protein	N/A
eggNOG-mapper	UHGV-0146683_39	411462.DORLON_00811	420.0	0	AAA domain	N/A
Pfam	UHGV-0146683_39	PF13479	N/A	N/A	AAA domain	AAA_24
structural_annotation	UHGV-0146683_39	PF13479,MF_00268,TIGR01618,COG0468	N/A	N/A	N/A	N/A
KOfam	UHGV-0146683_40	K03546	61.2	1.3e-17	sbcC, rad50; DNA repair protein SbcC/Rad50	N/A
PHROG	UHGV-0146683_40	phrog_1499	484.9	0	N/A	unknown function
UniRef90	UHGV-0146683_40	UniRef90_UPI00195DA8B3	614.0	0	AAA family ATPase	N/A
eggNOG-mapper	UHGV-0146683_40	645991.Sgly_0320	555.0	0	domain protein	N/A
PADLOC	UHGV-0146683_40	AAA_15	42.4	0.000000000022	N/A	N/A
Pfam	UHGV-0146683_40	PF13476	N/A	N/A	AAA domain	AAA_23
COG	UHGV-0146683_40	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
structural_annotation	UHGV-0146683_40	PF11398,MF_00365,TIGR00634,COG0497	N/A	N/A	N/A	N/A
PHROG	UHGV-0146683_41	phrog_1029	189.4	0	N/A	unknown function
eggNOG-mapper	UHGV-0146683_41	552398.HMPREF0866_01625	144.0	1.12e-39	N/A	N/A
structural_annotation	UHGV-0146683_41	PF10065,COG5532	N/A	N/A	N/A	N/A
PHROG	UHGV-0146683_42	phrog_997	105.2	5.2e-31	replication terminator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0146683_42	UniRef90_R6MCS9	97.1	1.21e-23	N/A	N/A
eggNOG-mapper	UHGV-0146683_42	552398.HMPREF0866_01626	135.0	1.09e-39	N/A	N/A
KOfam	UHGV-0146683_47	K18830	61.9	1.2e-17	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-0146683_47	phrog_4	54.1	0.000000000000004	transcriptional repressor	transcription regulation
UniRef90	UHGV-0146683_47	UniRef90_A0A1Q6K9L5	109.0	4.05e-28	Transcriptional regulator	N/A
eggNOG-mapper	UHGV-0146683_47	411470.RUMGNA_02181	107.0	4.11e-28	DNA-binding helix-turn-helix protein	N/A
Pfam	UHGV-0146683_47	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0146683_47	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0146683_47	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0146683_49	K23779	58.9	1.4e-16	sutR; XRE family transcriptional regulator, regulator of sulfur utilization	N/A
PHROG	UHGV-0146683_49	phrog_3	50.7	0.000000000000084	transcriptional repressor	transcription regulation
UniRef90	UHGV-0146683_49	UniRef90_UPI0001FAC2C6	67.0	0.000000000000258	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0146683_49	742741.HMPREF9475_00399	67.0	0.0000000000000433	Helix-turn-helix XRE-family like proteins	N/A
PADLOC	UHGV-0146683_49	retron_type_VI_hth_cluster2_1	45.1	0.000000000003	N/A	Retron
Pfam	UHGV-0146683_49	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0146683_49	PF01381,NF041951,COG1396	N/A	N/A	N/A	N/A
COG	UHGV-0146683_50	COG2333	N/A	N/A	DNA uptake channel protein ComEC C-terminal domain, metallo-beta-lactamase superfamily	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0146683	Yes	40,303	42	95	1
UHGV-2059429	No	27,866	41	68	1
UHGV-2046678	No	20,916	40	51	1
UHGV-2051781	No	12,650	41	30	1
UHGV-1816915	No	12,200	44	29	1