vOTU vOTU-076140

vOTU: vOTU-076140

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-076140
Number of genomes	2
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → Dysosmobacter → Dysosmobacter sp900544105
Taxonomy (UHGV)	vFAM-00005 → vSUBFAM-00840 → vGENUS-00721 → vSUBGEN-42088 → vOTU-076140
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae
Host range breadth	Family
Lifestyle	temperate (Evidence: integrase)

Representative genome
Genome ID	UHGV-0020209
Biosample ID	N/A
Genome length (bp)	32,721 bps
CheckV completeness	98.60% (High-quality)
CDS count	57
CDS density	93.93%
tRNA count	0
Integrase	Yes
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae	Total connections	22	Host agreement	100
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → Dysosmobacter → Dysosmobacter sp900544105	Total connections	1	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 98.6)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0020209_2	phrog_1863	66.2	2.9e-19	N/A	unknown function
eggNOG-mapper	UHGV-0020209_2	748224.HMPREF9436_00408	98.2	5.73e-26	N/A	N/A
UniRef90	UHGV-0020209_3	UniRef90_A0A8J6JAX9	57.0	0.000000000606	XkdX family protein	N/A
structural_annotation	UHGV-0020209_3	PF09693,TIGR01669	N/A	N/A	N/A	N/A
PHROG	UHGV-0020209_4	phrog_22773	43.9	0.0000000000039	N/A	unknown function
UniRef90	UHGV-0020209_4	UniRef90_A0A8J6JIT9	50.4	0.000005	Toxin-antitoxin system toxin subunit	N/A
eggNOG-mapper	UHGV-0020209_4	657322.FPR_21910	55.8	0.000000047	N/A	N/A
UniRef90	UHGV-0020209_5	UniRef90_A0A096B066	132.0	3.31e-31	Mtd_N domain-containing protein	N/A
UniRef90	UHGV-0020209_6	UniRef90_UPI00137A5F85	72.8	0.00000000000000137	type II toxin-antitoxin system HicA family toxin	N/A
eggNOG-mapper	UHGV-0020209_6	397287.C807_02203	83.6	1e-20	N/A	N/A
structural_annotation	UHGV-0020209_6	PF07927,COG1724	N/A	N/A	N/A	N/A
KOfam	UHGV-0020209_7	K18843	61.7	1.7e-17	hicB; antitoxin HicB	N/A
PHROG	UHGV-0020209_7	phrog_497	77.3	2.8e-22	toxin-antitoxin system HicB-like	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0020209_7	UniRef90_UPI001D0756FD	200.0	0	type II toxin-antitoxin system HicB family antitoxin	N/A
eggNOG-mapper	UHGV-0020209_7	397287.C807_02204	188.0	0	HicB_like antitoxin of bacterial toxin-antitoxin system	N/A
Pfam	UHGV-0020209_7	PF15919	N/A	N/A	HicB_like antitoxin of bacterial toxin-antitoxin system	HicB_lk_antitox
COG	UHGV-0020209_7	COG1598	N/A	N/A	Antitoxin component HicB of the HicAB toxin-antitoxin system	N/A
structural_annotation	UHGV-0020209_7	PF15919,COG1598	N/A	N/A	N/A	N/A
PHROG	UHGV-0020209_8	phrog_18725	108.0	4.9e-32	N/A	unknown function
eggNOG-mapper	UHGV-0020209_8	693746.OBV_18220	144.0	7.19987e-42	N/A	N/A
PHROG	UHGV-0020209_9	phrog_13879	547.9	0	N/A	unknown function
eggNOG-mapper	UHGV-0020209_9	1235797.C816_02659	691.0	0	N/A	N/A
structural_annotation	UHGV-0020209_9	PF14594,PF06588,NF033848,COG4379,COG5156	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0020209_10	1235797.C816_02660	107.0	2.36e-28	N/A	N/A
structural_annotation	UHGV-0020209_10	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0020209_11	phrog_58	90.9	0	tail length tape measure protein	tail
UniRef90	UHGV-0020209_11	UniRef90_UPI001D098231	184.0	1.4013e-44	peptidoglycan DD-metalloendopeptidase family protein	N/A
eggNOG-mapper	UHGV-0020209_11	1160721.RBI_II00528	211.0	0	Phage tail tape measure protein, TP901 family	N/A
COG	UHGV-0020209_11	COG1006	N/A	N/A	Multisubunit Na+/H+ antiporter, MnhC subunit	N/A
PHROG	UHGV-0020209_13	phrog_2115	40.6	0.000000000049	tail protein	tail
structural_annotation	UHGV-0020209_13	PF11836	N/A	N/A	N/A	N/A
PHROG	UHGV-0020209_14	phrog_88	108.8	3.2e-32	major tail protein	tail
UniRef90	UHGV-0020209_14	UniRef90_UPI0018771F27	288.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-0020209_14	33035.JPJF01000039_gene278	124.0	6.84e-33	N/A	N/A
NCBIFam	UHGV-0020209_14	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-0020209_14	PF04630,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-0020209_15	phrog_5	49.9	0.000000000000066	tail completion or Neck1 protein	connector
UniRef90	UHGV-0020209_15	UniRef90_R6UNR2	142.0	2.42e-40	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0020209_15	908340.HMPREF9406_2573	142.0	4.05003e-41	N/A	N/A
structural_annotation	UHGV-0020209_15	TIGR01725	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0020209_16	908340.HMPREF9406_2574	74.7	4.59e-16	N/A	N/A
structural_annotation	UHGV-0020209_16	PF05657,COG3167	N/A	N/A	N/A	N/A
PHROG	UHGV-0020209_17	phrog_19734	47.4	0.00000000000038	N/A	unknown function
eggNOG-mapper	UHGV-0020209_17	33035.JPJF01000039_gene275	52.4	0.000000457	N/A	N/A
structural_annotation	UHGV-0020209_17	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0020209_18	phrog_2550	57.5	1.6e-16	N/A	unknown function
UniRef90	UHGV-0020209_18	UniRef90_UPI0008717716	80.9	6.82e-18	phage head-tail connector protein	N/A
eggNOG-mapper	UHGV-0020209_18	1226322.HMPREF1545_00117	91.7	6.61e-23	N/A	N/A
structural_annotation	UHGV-0020209_18	PF05135,TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-0020209_19	phrog_10	205.8	0	major head protein	head and packaging
UniRef90	UHGV-0020209_19	UniRef90_A0A1C6H720	690.0	0	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
eggNOG-mapper	UHGV-0020209_19	1226322.HMPREF1545_00116	647.0	0	phage major capsid protein, HK97 family	N/A
Pfam	UHGV-0020209_19	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0020209_19	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0020209_19	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0020209_19	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-0020209_20	K06904	150.6	1.26117e-44	N/A	N/A
PHROG	UHGV-0020209_20	phrog_80	180.5	0	head maturation protease	head and packaging
UniRef90	UHGV-0020209_20	UniRef90_A0A1F2PDD9	243.0	0	Caudovirus prohead protease	N/A
eggNOG-mapper	UHGV-0020209_20	398512.JQKC01000009_gene450	224.0	0	Phage prohead protease, HK97 family	N/A
Pfam	UHGV-0020209_20	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
NCBIFam	UHGV-0020209_20	TIGR01543.1	N/A	N/A	HK97 family phage prohead protease	N/A
COG	UHGV-0020209_20	COG3740	N/A	N/A	Phage head maturation protease	N/A
structural_annotation	UHGV-0020209_20	PF04586,TIGR01543,COG3740	N/A	N/A	N/A	N/A
PHROG	UHGV-0020209_21	phrog_12	187.8	0	portal protein	head and packaging
UniRef90	UHGV-0020209_21	UniRef90_U2SKC6	576.0	0	Phage portal protein, HK97 family	N/A
eggNOG-mapper	UHGV-0020209_21	1226322.HMPREF1545_00114	576.0	0	Phage portal protein, HK97 family	N/A
Pfam	UHGV-0020209_21	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-0020209_21	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-0020209_21	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0020209_21	PF04860,MF_04120,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-0020209_22	phrog_9	257.3	0	terminase large subunit	head and packaging
UniRef90	UHGV-0020209_22	UniRef90_A0A3D1VAR5	746.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0020209_22	1226322.HMPREF1545_00113	689.0	0	Phage Terminase	N/A
Pfam	UHGV-0020209_22	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
Pfam	UHGV-0020209_22	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0020209_22	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0020209_22	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0020209_22	PF03354,PF20441,PF05119,MF_04146,TIGR01547,TIGR01558,COG4626,COG3747	N/A	N/A	N/A	N/A
PHROG	UHGV-0020209_24	phrog_119	62.2	7.4e-18	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0020209_24	UniRef90_A0A316P1K8	125.0	1.62e-35	HNH endonuclease	N/A
eggNOG-mapper	UHGV-0020209_24	588581.Cpap_1277	118.0	2.32e-33	HNH nucleases	N/A
COG	UHGV-0020209_24	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
eggNOG-mapper	UHGV-0020209_25	742738.HMPREF9460_00868	56.6	0.000000000601	Cysteine-rich KTR	N/A
Pfam	UHGV-0020209_25	PF14205	N/A	N/A	Cysteine-rich KTR	Cys_rich_KTR
structural_annotation	UHGV-0020209_25	PF14205	N/A	N/A	N/A	N/A
PHROG	UHGV-0020209_26	phrog_3584	74.4	1.4e-21	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0020209_26	742738.HMPREF9460_04063	286.0	0	N/A	N/A
structural_annotation	UHGV-0020209_26	PF01446	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0020209_27	NF041677	N/A	N/A	N/A	N/A
PHROG	UHGV-0020209_28	phrog_27610	43.5	0.0000000000037	N/A	unknown function
KOfam	UHGV-0020209_29	K03111	140.3	1.99993e-41	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0020209_29	phrog_44	136.2	2.29999e-40	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0020209_29	UniRef90_UPI001030DE80	200.0	0	single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0020209_29	1378168.N510_01674	191.0	0	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	N/A
Pfam	UHGV-0020209_29	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0020209_29	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0020209_29	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0020209_29	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0020209_29	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0020209_32	318464.IO99_07375	85.9	1.67e-20	N/A	N/A
UniRef90	UHGV-0020209_34	UniRef90_A0A8D9PDK2	52.4	0.000000861	Zinc-ribbon containing domain	N/A
PHROG	UHGV-0020209_36	phrog_38832	52.0	0.0000000000000011	N/A	unknown function
eggNOG-mapper	UHGV-0020209_36	445972.ANACOL_00165	70.9	0.000000000000897	N/A	N/A
PHROG	UHGV-0020209_37	phrog_757	181.2	0	DNA methyltransferase	other
UniRef90	UHGV-0020209_37	UniRef90_UPI001C00B13F	398.0	0	DNA cytosine methyltransferase	N/A
eggNOG-mapper	UHGV-0020209_37	748224.HMPREF9436_03069	317.0	0	DNA (cytosine-5-)-methyltransferase activity	N/A
COG	UHGV-0020209_37	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-0020209_37	PF00145,MF_01872,TIGR00675,COG0270	N/A	N/A	N/A	N/A
PHROG	UHGV-0020209_38	phrog_424	102.2	6.1e-30	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0020209_38	UniRef90_UPI001EDF1E9D	411.0	0	phosphoadenosine phosphosulfate reductase family protein	N/A
eggNOG-mapper	UHGV-0020209_38	693746.OBV_42570	342.0	0	N/A	N/A
PADLOC	UHGV-0020209_38	SspD_00001	65.8	1.4e-18	SspD	SSP
COG	UHGV-0020209_38	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-0020209_38	PF01507,MF_00063,NF005316,COG0175	N/A	N/A	N/A	N/A
Pfam	UHGV-0020209_39	PF04448	N/A	N/A	N/A	DUF551
KOfam	UHGV-0020209_40	K01520	138.9	4.10006e-41	dut, DUT; dUTP pyrophosphatase [EC:3.6.1.23]	N/A
PHROG	UHGV-0020209_40	phrog_135	120.3	1.1e-35	dUTPase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0020209_40	UniRef90_UPI001D07FBC5	203.0	0	dUTP diphosphatase	N/A
eggNOG-mapper	UHGV-0020209_40	887929.HMP0721_1278	179.0	0	dUTPase	N/A
Pfam	UHGV-0020209_40	PF00692	N/A	N/A	dUTPase	dUTPase
NCBIFam	UHGV-0020209_40	TIGR00576.1	N/A	N/A	dUTP diphosphatase	N/A
COG	UHGV-0020209_40	COG0756	N/A	N/A	dUTP pyrophosphatase (dUTPase)	N/A
structural_annotation	UHGV-0020209_40	PF00692,MF_00116,NF001862,COG0756	N/A	N/A	N/A	N/A
KOfam	UHGV-0020209_41	K02314	243.6	0	dnaB; replicative DNA helicase [EC:5.6.2.3]	N/A
PHROG	UHGV-0020209_41	phrog_19	212.3	0	DnaB-like replicative helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0020209_41	UniRef90_A0A3A8Z521	313.0	0	DNA helicase	N/A
eggNOG-mapper	UHGV-0020209_41	1007096.BAGW01000033_gene1616	278.0	0	DnaB-like helicase N terminal domain	N/A
Pfam	UHGV-0020209_41	PF00772	N/A	N/A	DnaB-like helicase N terminal domain	DnaB
Pfam	UHGV-0020209_41	PF03796	N/A	N/A	DnaB-like helicase C terminal domain	DnaB_C
COG	UHGV-0020209_41	COG0305	N/A	N/A	Replicative DNA helicase	N/A
structural_annotation	UHGV-0020209_41	PF03796,PF00772,MF_04155,NF005240,COG0305	N/A	N/A	N/A	N/A
PHROG	UHGV-0020209_42	phrog_270	55.2	0.0000000000000014	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0020209_42	UniRef90_UPI001ADEF5BC	179.0	0	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0020209_42	742738.HMPREF9460_04047	76.3	0.000000000000161	DnaD domain protein	N/A
Pfam	UHGV-0020209_42	PF13730	N/A	N/A	Helix-turn-helix domain	HTH_36
COG	UHGV-0020209_42	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0020209_42	PF20714,MF_01177,NF040582,COG3355	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0020209_45	744872.Spica_1767	72.4	0.00000000000095	N/A	N/A
KOfam	UHGV-0020209_47	K13884	72.0	6.4e-21	MARCO; macrophage receptor with collagenous structure	N/A
PHROG	UHGV-0020209_47	phrog_4433	241.0	0	N/A	unknown function
eggNOG-mapper	UHGV-0020209_47	269482.Bcep1808_1157	100.0	4.32e-21	Flagellar Assembly Protein A	N/A
Pfam	UHGV-0020209_47	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
COG	UHGV-0020209_47	COG5164	N/A	N/A	Transcription elongation factor SPT5	N/A
structural_annotation	UHGV-0020209_47	PF12120,NF000318	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0020209_49	PF13560,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A
KOfam	UHGV-0020209_50	K22300	66.6	5.1e-19	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0020209_50	phrog_8	56.5	6.6e-16	transcriptional regulator	transcription regulation
UniRef90	UHGV-0020209_50	UniRef90_A0A1Y3ZNM0	82.4	2.1e-19	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0020209_50	693746.OBV_25500	75.1	2.92e-17	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-0020209_50	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0020209_50	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0020209_50	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
UniRef90	UHGV-0020209_54	UniRef90_UPI001956EF77	152.0	1.54143e-44	stalk domain-containing protein	N/A
eggNOG-mapper	UHGV-0020209_54	509191.AEDB02000084_gene5185	71.2	0.00000000000185	Right handed beta helix region	N/A
Pfam	UHGV-0020209_54	PF07833	N/A	N/A	Copper amine oxidase N-terminal domain	Cu_amine_oxidN1
COG	UHGV-0020209_54	COG0760	N/A	N/A	Peptidyl-prolyl isomerase, parvulin family	N/A
UniRef90	UHGV-0020209_55	UniRef90_A0A6J6I5H7	73.9	2.05e-16	Unannotated protein	N/A
eggNOG-mapper	UHGV-0020209_55	483216.BACEGG_01163	56.6	0.000000000223	N/A	N/A
KOfam	UHGV-0020209_56	K14059	196.5	0	int; integrase	N/A
PHROG	UHGV-0020209_56	phrog_1	187.4	0	integrase	integration and excision
UniRef90	UHGV-0020209_56	UniRef90_UPI001EDE32BF	520.0	0	site-specific integrase	N/A
eggNOG-mapper	UHGV-0020209_56	1226322.HMPREF1545_00144	329.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0020209_56	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0020209_56	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0020209_56	PF00589,PF12167,MF_02055,NF040815,COG4974	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0020209	Yes	32,721	59	99	1
UHGV-0039863	No	20,009	61	60	1