vOTU vOTU-076576

vOTU: vOTU-076576

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-076576
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00006 → vSUBFAM-05146 → vGENUS-10478 → vSUBGEN-13761 → vOTU-076576
Host lineage	Bacteria → Actinobacteriota → Coriobacteriia → Coriobacteriales → Eggerthellaceae → Adlercreutzia
Host range breadth	Genus
Lifestyle	temperate (evidence: integrase)

Representative genome
Genome ID	UHGV-0047198
Biosample ID	N/A
Genome length (bp)	45,265 bps
CheckV completeness	99.90% (High-quality)
CDS count	69
CDS density	87.03%
tRNA count	2
Integrase	Yes
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Actinobacteriota → Coriobacteriia → Coriobacteriales → Eggerthellaceae → Adlercreutzia	Total connections	9	Host agreement	100
PHIST-predicted host lineage	Bacteria → Actinobacteriota → Coriobacteriia → Coriobacteriales → Eggerthellaceae → Adlercreutzia → Adlercreutzia equolifaciens	Total connections	6	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 99.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0047198_1	K14059	107.5	2e-31	int; integrase	N/A
PHROG	UHGV-0047198_1	phrog_1	90.3	2.6e-26	integrase	integration and excision
UniRef90	UHGV-0047198_1	UniRef90_A0A3N0ATU2	783.0	0	Core-binding (CB) domain-containing protein	N/A
eggNOG-mapper	UHGV-0047198_1	326298.Suden_0959	68.9	0.00000000055	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0047198_1	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
COG	UHGV-0047198_1	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0047198_1	PF00589,MF_01808,TIGR02224,COG4974	N/A	N/A	N/A	N/A
UniRef90	UHGV-0047198_3	UniRef90_A0A3N0ASU4	171.0	0	HTH cro/C1-type domain-containing protein	N/A
KOfam	UHGV-0047198_4	K17081	89.8	3.3e-26	PHB2; prohibitin 2	N/A
PHROG	UHGV-0047198_4	phrog_200	126.9	1.5e-37	lipoprotein	other
UniRef90	UHGV-0047198_4	UniRef90_A0A3N0AUG5	551.0	0	PHB domain-containing protein	N/A
eggNOG-mapper	UHGV-0047198_4	526224.Bmur_1813	95.1	5.55e-20	prohibitin homologues	N/A
Pfam	UHGV-0047198_4	PF01145	N/A	N/A	SPFH domain / Band 7 family	Band_7
COG	UHGV-0047198_4	COG0330	N/A	N/A	Regulator of protease activity HflC, stomatin/prohibitin superfamily	N/A
UniRef90	UHGV-0047198_6	UniRef90_A0A3N0ATF1	136.0	8.52998e-41	HTH_17 domain-containing protein	N/A
Pfam	UHGV-0047198_6	PF12728	N/A	N/A	Helix-turn-helix domain	HTH_17
PHROG	UHGV-0047198_10	phrog_2872	203.4	0	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0047198_10	UniRef90_UPI0006881372	246.0	0	AAA family ATPase	N/A
eggNOG-mapper	UHGV-0047198_10	1415774.U728_1119	238.0	0	AAA domain	N/A
structural_annotation	UHGV-0047198_10	PF13479,MF_00350,TIGR01618,COG0468	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0047198_12	1121866.AUGK01000014_gene2067	156.0	2.83062e-43	N/A	N/A
structural_annotation	UHGV-0047198_12	PF18358,MF_01354,TIGR00739,COG1862	N/A	N/A	N/A	N/A
PHROG	UHGV-0047198_19	phrog_599	43.8	0.0000000000057	Lar-like restriction alleviation protein	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0047198_19	UniRef90_UPI001C3D1FA8	93.2	9.52e-22	Lar family restriction alleviation protein	N/A
eggNOG-mapper	UHGV-0047198_19	1384484.AEQU_1187	72.8	0.0000000000000182	DNA-templated transcriptional preinitiation complex assembly	N/A
Pfam	UHGV-0047198_19	PF14354	N/A	N/A	Restriction alleviation protein Lar	Lar_restr_allev
dbAPIS	UHGV-0047198_19	APIS033	N/A	N/A	Lar is functionally similar to RaI, is able to alleviate restriction and enhance modification by EcoKI. And the nucleotide sequences of their genes share 47% identity, indicating a common origin.	N/A
COG	UHGV-0047198_19	COG1405	N/A	N/A	Transcription initiation factor TFIIIB, Brf1 subunit/Transcription initiation factor TFIIB	N/A
structural_annotation	UHGV-0047198_19	PF14354,NF007260	N/A	N/A	N/A	N/A
PHROG	UHGV-0047198_27	phrog_2316	44.4	0.0000000000032	N/A	unknown function
UniRef90	UHGV-0047198_27	UniRef90_A0A7C6UUX4	65.5	0.00000000000527	N/A	N/A
eggNOG-mapper	UHGV-0047198_27	1280676.AUJO01000024_gene3262	82.4	2.21e-19	N/A	N/A
structural_annotation	UHGV-0047198_27	PF16475,MF_00436,NF033216,COG1923	N/A	N/A	N/A	N/A
UniRef90	UHGV-0047198_28	UniRef90_A0A7W5GQT2	79.3	2.35e-17	Glucan phosphorylase	N/A
structural_annotation	UHGV-0047198_28	TIGR03188,COG1694	N/A	N/A	N/A	N/A
PHROG	UHGV-0047198_31	phrog_18107	49.9	0.000000000000011	N/A	unknown function
eggNOG-mapper	UHGV-0047198_31	903814.ELI_1274	119.0	2.48e-31	N/A	N/A
structural_annotation	UHGV-0047198_31	PF05037	N/A	N/A	N/A	N/A
PHROG	UHGV-0047198_32	phrog_3490	110.3	1.2e-32	ERCC4-type nuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0047198_32	UniRef90_A0A353J4N0	135.0	1.54e-37	ERCC4 domain-containing protein	N/A
eggNOG-mapper	UHGV-0047198_32	1504823.CCMM01000008_gene1063	98.2	7.96e-24	N/A	N/A
Pfam	UHGV-0047198_32	PF02732	N/A	N/A	ERCC4 domain	ERCC4
structural_annotation	UHGV-0047198_32	PF02732,NF040956,COG1948	N/A	N/A	N/A	N/A
PHROG	UHGV-0047198_33	phrog_256	365.7	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0047198_33	UniRef90_UPI001655DAE1	530.0	0	bifunctional DNA primase/polymerase	N/A
eggNOG-mapper	UHGV-0047198_33	500632.CLONEX_03568	286.0	0	Virulence-associated protein E	N/A
Pfam	UHGV-0047198_33	PF09250	N/A	N/A	Bifunctional DNA primase/polymerase, N-terminal	Prim-Pol
Pfam	UHGV-0047198_33	PF08708	N/A	N/A	Primase C terminal 1 (PriCT-1)	PriCT_1
Pfam	UHGV-0047198_33	PF05272	N/A	N/A	Virulence-associated protein E-like domain	VapE-like_dom
COG	UHGV-0047198_33	COG5545	N/A	N/A	Predicted P-loop ATPase and inactivated derivatives	N/A
structural_annotation	UHGV-0047198_33	PF05272,PF09250,PF08708,MF_00016,NF011296,COG5545	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0047198_37	PF16677	N/A	N/A	N/A	N/A
UniRef90	UHGV-0047198_39	UniRef90_A0A662S5F4	133.0	1.21e-33	Glutamine amidotransferase type-2 domain-containing protein	N/A
eggNOG-mapper	UHGV-0047198_39	1123257.AUFV01000014_gene3406	60.8	0.0000000336	N/A	N/A
structural_annotation	UHGV-0047198_39	MF_01931,TIGR01134,COG0121	N/A	N/A	N/A	N/A
PHROG	UHGV-0047198_40	phrog_16683	153.0	1.4013e-45	N/A	unknown function
UniRef90	UHGV-0047198_40	UniRef90_UPI0010FFB493	160.0	1.20999e-40	amidoligase family protein	N/A
eggNOG-mapper	UHGV-0047198_40	1203606.HMPREF1526_00750	150.0	2.69e-38	Putative amidoligase enzyme	N/A
Pfam	UHGV-0047198_40	PF12224	N/A	N/A	Putative amidoligase enzyme	Amidoligase_2
structural_annotation	UHGV-0047198_40	PF12224,MF_01609,NF010042,COG2170	N/A	N/A	N/A	N/A
UniRef90	UHGV-0047198_41	UniRef90_N2BPN1	51.6	0.00000339	HTH cro/C1-type domain-containing protein	N/A
PHROG	UHGV-0047198_42	phrog_585	64.4	1.9e-18	N/A	unknown function
UniRef90	UHGV-0047198_42	UniRef90_UPI000F53A435	98.6	3.53e-24	N/A	N/A
eggNOG-mapper	UHGV-0047198_42	561180.BIFGAL_02780	85.5	7.34e-20	N/A	N/A
Pfam	UHGV-0047198_42	PF10711	N/A	N/A	N/A	DUF2513
structural_annotation	UHGV-0047198_42	PF10711,TIGR03433,COG3355	N/A	N/A	N/A	N/A
KOfam	UHGV-0047198_44	K14060	106.7	2.8e-31	pinR; putative DNA-invertase from lambdoid prophage Rac	N/A
PHROG	UHGV-0047198_44	phrog_125	128.1	6.9e-38	DNA invertase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0047198_44	UniRef90_A0A3N0ASV4	403.0	0	Recombinase	N/A
eggNOG-mapper	UHGV-0047198_44	1121866.AUGK01000003_gene1426	208.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-0047198_44	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
COG	UHGV-0047198_44	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0047198_44	PF00239,PF02796,NF009949,COG1961	N/A	N/A	N/A	N/A
PHROG	UHGV-0047198_46	phrog_38	191.3	0	terminase large subunit	head and packaging
UniRef90	UHGV-0047198_46	UniRef90_UPI0013EC3644	677.0	0	phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0047198_46	1121866.AUGK01000003_gene1428	653.0	0	chromosome segregation	N/A
NCBIFam	UHGV-0047198_46	TIGR01630.1	N/A	N/A	phage terminase large subunit	N/A
COG	UHGV-0047198_46	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0047198_46	PF17289,PF02562,MF_04147,NF033889,COG5362,COG5410	N/A	N/A	N/A	N/A
PHROG	UHGV-0047198_47	phrog_64	187.1	0	portal protein	head and packaging
UniRef90	UHGV-0047198_47	UniRef90_UPI000427669E	558.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-0047198_47	1121866.AUGK01000003_gene1429	558.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0047198_47	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0047198_47	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0047198_48	phrog_172	63.1	5.9e-18	head scaffolding protein	head and packaging
UniRef90	UHGV-0047198_48	UniRef90_UPI000E41BB01	73.6	0.000000000000853	N/A	N/A
eggNOG-mapper	UHGV-0047198_48	1232453.BAIF02000058_gene1626	74.7	0.0000000000000635	N/A	N/A
Pfam	UHGV-0047198_48	PF14265	N/A	N/A	N/A	DUF4355
PHROG	UHGV-0047198_49	phrog_247	203.8	0	major head protein	head and packaging
UniRef90	UHGV-0047198_49	UniRef90_A0A3N0ATH1	697.0	0	Coat protein	N/A
eggNOG-mapper	UHGV-0047198_49	1304866.K413DRAFT_3038	263.0	0	N/A	N/A
structural_annotation	UHGV-0047198_49	PF20036,MF_04113,TIGR04387,COG4653	N/A	N/A	N/A	N/A
UniRef90	UHGV-0047198_50	UniRef90_A0A3N0ATP1	225.0	0	DNA-packaging protein	N/A
eggNOG-mapper	UHGV-0047198_50	1298920.KI911353_gene2658	48.9	0.00000598	N/A	N/A
Pfam	UHGV-0047198_50	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
structural_annotation	UHGV-0047198_50	TIGR01560	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0047198_51	1121866.AUGK01000003_gene1432	90.1	1.72e-21	N/A	N/A
PHROG	UHGV-0047198_52	phrog_5	50.8	0.000000000000043	tail completion or Neck1 protein	connector
eggNOG-mapper	UHGV-0047198_52	397290.C810_01411	73.2	0.00000000000005	N/A	N/A
Pfam	UHGV-0047198_52	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-0047198_52	PF17395,TIGR01725,COG5005	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0047198_53	PF06141,TIGR02367,COG3167	N/A	N/A	N/A	N/A
PHROG	UHGV-0047198_54	phrog_158	50.2	0.000000000000051	major tail protein	tail
UniRef90	UHGV-0047198_54	UniRef90_A0A3N0ASU6	290.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-0047198_54	1432847.V5US29_9VIRU	60.8	0.00000000117	N/A	N/A
structural_annotation	UHGV-0047198_54	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
UniRef90	UHGV-0047198_55	UniRef90_UPI0013EA646A	99.4	8.71e-25	N/A	N/A
Pfam	UHGV-0047198_55	PF16478	N/A	N/A	N/A	DUF5055
PHROG	UHGV-0047198_57	phrog_1533	159.0	0	tail length tape measure protein	tail
eggNOG-mapper	UHGV-0047198_57	1121866.AUGK01000003_gene1437	461.0	0	phage tail tape measure protein	N/A
COG	UHGV-0047198_57	COG1280	N/A	N/A	Threonine/homoserine/homoserine lactone efflux protein	N/A
PHROG	UHGV-0047198_58	phrog_1194	87.3	1.3e-25	N/A	unknown function
eggNOG-mapper	UHGV-0047198_58	1121866.AUGK01000003_gene1438	163.0	0	N/A	N/A
structural_annotation	UHGV-0047198_58	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0047198_59	phrog_6616	410.4	0	tail protein	tail
UniRef90	UHGV-0047198_59	UniRef90_A0A2Y9BMC1	305.0	0	Peptidase S74 domain-containing protein	N/A
eggNOG-mapper	UHGV-0047198_59	1121866.AUGK01000003_gene1439	384.0	0	Phage minor structural protein	N/A
COG	UHGV-0047198_59	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0047198_59	PF05113,NF033848,COG3500	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0047198_61	PF07761	N/A	N/A	N/A	N/A
UniRef90	UHGV-0047198_62	UniRef90_A0A6L8Q696	150.0	5.04467e-44	Phage holin family protein	N/A
eggNOG-mapper	UHGV-0047198_62	1384484.AEQU_1162	122.0	8.8e-34	Bacteriophage holin family	N/A
Pfam	UHGV-0047198_62	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
KOfam	UHGV-0047198_64	K01447	89.5	5.3e-26	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0047198_64	phrog_1493	127.9	1.7e-39	endolysin	lysis
UniRef90	UHGV-0047198_64	UniRef90_A0A3N0ASN7	662.0	0	N-acetylmuramoyl-L-alanine amidase domain-containing protein	N/A
eggNOG-mapper	UHGV-0047198_64	1235794.C811_01391	338.0	0	Ami_2	N/A
Pfam	UHGV-0047198_64	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
Pfam	UHGV-0047198_64	PF09374	N/A	N/A	Predicted Peptidoglycan domain	PG_binding_3
Pfam	UHGV-0047198_64	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
COG	UHGV-0047198_64	COG3409	N/A	N/A	Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases	N/A
structural_annotation	UHGV-0047198_64	PF01510,PF18342,MF_04111,NF008758,COG5632	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0047198_65	1121866.AUGK01000003_gene1445	63.9	0.00000000431	N/A	N/A
KOfam	UHGV-0047198_68	K14059	161.2	0	int; integrase	N/A
PHROG	UHGV-0047198_68	phrog_1	144.0	1.3004e-42	integrase	integration and excision
UniRef90	UHGV-0047198_68	UniRef90_UPI001C3E9B08	516.0	0	site-specific integrase	N/A
eggNOG-mapper	UHGV-0047198_68	1235794.C811_01388	500.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0047198_68	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-0047198_68	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0047198_68	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0047198_68	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
UniRef90	UHGV-0047198_69	UniRef90_F0HLT8	117.0	3.62e-32	Conserved domain protein	N/A
eggNOG-mapper	UHGV-0047198_69	1384484.AEQU_1352	196.0	0	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0047198	Yes	45,265	61	100	1