vOTU vOTU-076622

vOTU: vOTU-076622

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-076622
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00100 → vSUBFAM-06337 → vGENUS-15758 → vSUBGEN-27763 → vOTU-076622
Host lineage	Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Pasteurellaceae → Haemophilus_D → Haemophilus_D sp905215245
Host range breadth	Species
Lifestyle	lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1457919
Biosample ID	SAMN02333937
Genome length (bp)	34,420 bps
CheckV completeness	91.77% (High-quality)
CDS count	54
CDS density	90.62%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Pasteurellaceae → Haemophilus_D → Haemophilus_D sp905215245	Total connections	6	Host agreement	100
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 91.77)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1457919_2	phrog_26448	55.7	7.4e-16	N/A	unknown function
eggNOG-mapper	UHGV-1457919_2	1235803.C825_05324	55.1	0.000000117	N/A	N/A
Pfam	UHGV-1457919_2	PF20647	N/A	N/A	N/A	DUF6808
PHROG	UHGV-1457919_4	phrog_35741	49.4	0.000000000000064	N/A	unknown function
eggNOG-mapper	UHGV-1457919_4	445970.ALIPUT_01619	72.8	0.00000000000000442	N/A	N/A
KOfam	UHGV-1457919_5	K03791	232.0	0	K03791; putative chitinase	N/A
PHROG	UHGV-1457919_5	phrog_181	190.3	0	endolysin	lysis
UniRef90	UHGV-1457919_5	UniRef90_UPI0013D8362C	204.0	0	glycoside hydrolase family 19 protein	N/A
eggNOG-mapper	UHGV-1457919_5	378806.STAUR_6728	175.0	0	Chitinase class I	N/A
Pfam	UHGV-1457919_5	PF00182	N/A	N/A	Chitinase class I	Glyco_hydro_19
COG	UHGV-1457919_5	COG1388	N/A	N/A	LysM repeat	N/A
structural_annotation	UHGV-1457919_5	PF00182,COG3179	N/A	N/A	N/A	N/A
UniRef90	UHGV-1457919_7	UniRef90_D3I9X2	125.0	2e-33	N/A	N/A
eggNOG-mapper	UHGV-1457919_7	411901.BACCAC_01123	112.0	6.49e-29	N/A	N/A
Pfam	UHGV-1457919_7	PF14301	N/A	N/A	N/A	DUF4376
NCBIFam	UHGV-1457919_8	TIGR02167.1	N/A	N/A	bacterial surface protein 26-residue repeat	N/A
KOfam	UHGV-1457919_9	K16628	93.3	5.8e-28	COL7A; collagen type VII alpha	N/A
PHROG	UHGV-1457919_9	phrog_819	118.2	7.7e-35	tail protein	tail
Pfam	UHGV-1457919_9	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
COG	UHGV-1457919_9	COG3266	N/A	N/A	Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain	N/A
structural_annotation	UHGV-1457919_11	PF16389,NF011785	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1457919_12	742725.HMPREF9450_02124	262.0	0	N/A	N/A
PHROG	UHGV-1457919_13	phrog_32115	137.0	9.99995e-41	N/A	unknown function
eggNOG-mapper	UHGV-1457919_13	742725.HMPREF9450_02123	233.0	0	nuclear chromosome segregation	N/A
COG	UHGV-1457919_13	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
PHROG	UHGV-1457919_15	phrog_1407	43.7	0.0000000000039	major tail protein	tail
Pfam	UHGV-1457919_15	PF06199	N/A	N/A	Phage tail tube protein	Phage_tail_2
structural_annotation	UHGV-1457919_15	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1457919_16	PF16807,NF040576	N/A	N/A	N/A	N/A
PHROG	UHGV-1457919_17	phrog_5	45.1	0.00000000000093	tail completion or Neck1 protein	connector
structural_annotation	UHGV-1457919_17	PF04883,TIGR01725,COG5005	N/A	N/A	N/A	N/A
Pfam	UHGV-1457919_18	PF05521	N/A	N/A	Phage head-tail joining protein	Phage_H_T_join
structural_annotation	UHGV-1457919_18	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
Pfam	UHGV-1457919_19	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
structural_annotation	UHGV-1457919_19	PF17900,TIGR02215	N/A	N/A	N/A	N/A
PHROG	UHGV-1457919_21	phrog_10	94.2	1.6e-27	major head protein	head and packaging
UniRef90	UHGV-1457919_21	UniRef90_A0A1V5ID18	248.0	0	Phage capsid family protein	N/A
Pfam	UHGV-1457919_21	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-1457919_21	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
structural_annotation	UHGV-1457919_21	PF05065,PF15188,MF_04133,TIGR01554,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-1457919_22	K06904	147.1	1.4013e-43	N/A	N/A
PHROG	UHGV-1457919_22	phrog_80	145.4	4.49817e-43	head maturation protease	head and packaging
UniRef90	UHGV-1457919_22	UniRef90_R6E6C6	129.0	4.87e-34	Caudovirus prohead protease	N/A
eggNOG-mapper	UHGV-1457919_22	926692.AZYG01000066_gene2175	117.0	2.06e-30	Caudovirus prohead serine protease	N/A
Pfam	UHGV-1457919_22	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
NCBIFam	UHGV-1457919_22	TIGR01543.1	N/A	N/A	HK97 family phage prohead protease	N/A
COG	UHGV-1457919_22	COG3740	N/A	N/A	Phage head maturation protease	N/A
structural_annotation	UHGV-1457919_22	PF04586,TIGR01543,COG3740	N/A	N/A	N/A	N/A
PHROG	UHGV-1457919_23	phrog_2468	94.8	9.6e-28	head morphogenesis	head and packaging
UniRef90	UHGV-1457919_23	UniRef90_A0A2Z3H0B8	65.5	0.00000000728	Phage_Mu_F domain-containing protein	N/A
eggNOG-mapper	UHGV-1457919_23	1329516.JPST01000018_gene2643	70.5	0.0000000000848	cell adhesion	N/A
COG	UHGV-1457919_23	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1457919_23	PF06152,TIGR01641	N/A	N/A	N/A	N/A
PHROG	UHGV-1457919_24	phrog_12	105.2	4.6e-31	portal protein	head and packaging
UniRef90	UHGV-1457919_24	UniRef90_A0A661HL83	110.0	4.71e-23	Phage portal protein	N/A
eggNOG-mapper	UHGV-1457919_24	742725.HMPREF9450_02103	244.0	0	Portal protein	N/A
Pfam	UHGV-1457919_24	PF04860	N/A	N/A	Phage portal protein	Phage_portal
COG	UHGV-1457919_24	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-1457919_24	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-1457919_25	K06909	209.5	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1457919_25	phrog_3717	134.3	6.3e-40	terminase large subunit	head and packaging
UniRef90	UHGV-1457919_25	UniRef90_G5H916	332.0	0	PBSX family phage terminase, large subunit	N/A
eggNOG-mapper	UHGV-1457919_25	742725.HMPREF9450_02102	332.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-1457919_25	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
COG	UHGV-1457919_25	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1457919_25	PF04466,PF20441,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1457919_29	phrog_940	277.2	0	nuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1457919_29	UniRef90_F3QSL0	405.0	0	Conserved domain protein	N/A
eggNOG-mapper	UHGV-1457919_29	762982.HMPREF9442_01170	405.0	0	N/A	N/A
Pfam	UHGV-1457919_29	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
Pfam	UHGV-1457919_29	PF14386	N/A	N/A	N/A	DUF4417
COG	UHGV-1457919_29	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-1457919_29	PF14386,PF02195,MF_02015,TIGR04285,COG1475	N/A	N/A	N/A	N/A
KOfam	UHGV-1457919_31	K01160	49.7	0.000000000000089	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-1457919_31	phrog_34	54.8	0.000000000000002	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1457919_31	UniRef90_UPI0012B16EF5	162.0	0	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-1457919_31	1211777.BN77_4156	51.2	0.00000147	Endodeoxyribonuclease RusA	N/A
Pfam	UHGV-1457919_31	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
structural_annotation	UHGV-1457919_31	PF19595,NF007305,COG4570	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1457919_32	PF12643,MF_01019,NF001610,COG0140	N/A	N/A	N/A	N/A
PHROG	UHGV-1457919_34	phrog_8684	99.7	2.2e-29	N/A	unknown function
UniRef90	UHGV-1457919_34	UniRef90_A0A173VH02	95.1	8.37e-22	YopX protein	N/A
eggNOG-mapper	UHGV-1457919_34	411477.PARMER_02066	69.7	0.00000000000107	YopX protein	N/A
Pfam	UHGV-1457919_34	PF09643	N/A	N/A	YopX protein	YopX
NCBIFam	UHGV-1457919_34	TIGR01671.1	N/A	N/A	phage conserved hypothetical protein TIGR01671	N/A
structural_annotation	UHGV-1457919_34	PF09643,TIGR01671	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1457919_42	1121100.JCM6294_524	60.5	0.0000000407	N/A	N/A
PHROG	UHGV-1457919_43	phrog_5070	138.7	1.90002e-41	N/A	unknown function
UniRef90	UHGV-1457919_43	UniRef90_UPI0016261BF3	102.0	1.71e-23	polymer-forming cytoskeletal protein	N/A
eggNOG-mapper	UHGV-1457919_43	1232443.BAIA02000066_gene981	74.3	0.0000000000000391	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell	N/A
Pfam	UHGV-1457919_43	PF18836	N/A	N/A	YdcK Beta solenoid repeat	B_solenoid_ydck
COG	UHGV-1457919_43	COG1044	N/A	N/A	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase	N/A
structural_annotation	UHGV-1457919_43	NF040481	N/A	N/A	N/A	N/A
PHROG	UHGV-1457919_46	phrog_2514	122.1	3.5e-36	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1457919_46	386415.NT01CX_2190	120.0	1.48e-29	Transcriptional regulator	N/A
COG	UHGV-1457919_46	COG2188	N/A	N/A	DNA-binding transcriptional regulator, GntR family	N/A
structural_annotation	UHGV-1457919_46	PF09681,PF09524,TIGR01714,COG1846	N/A	N/A	N/A	N/A
PHROG	UHGV-1457919_47	phrog_72	75.6	7e-22	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1457919_47	UniRef90_UPI0008D9D600	107.0	3.18e-27	recombination protein NinB	N/A
eggNOG-mapper	UHGV-1457919_47	762984.HMPREF9445_00149	85.9	1.59e-19	N/A	N/A
structural_annotation	UHGV-1457919_47	NF007281	N/A	N/A	N/A	N/A
KOfam	UHGV-1457919_48	K03111	143.2	2.49992e-42	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1457919_48	phrog_44	117.2	1.4e-34	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1457919_48	UniRef90_A0A1F3MS37	131.0	8.46e-37	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1457919_48	580332.Slit_0800	113.0	1.73e-30	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	N/A
Pfam	UHGV-1457919_48	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1457919_48	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1457919_48	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1457919_48	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1457919_48	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-1457919_49	phrog_6244	67.7	1.3e-19	N/A	unknown function
UniRef90	UHGV-1457919_49	UniRef90_A6L492	161.0	6.02558e-44	PDDEXK_1 domain-containing protein	N/A
eggNOG-mapper	UHGV-1457919_49	657309.BXY_08750	167.0	0	YqaJ viral recombinase family	N/A
COG	UHGV-1457919_49	COG5377	N/A	N/A	Phage-related protein, predicted endonuclease	N/A
structural_annotation	UHGV-1457919_49	PF12705,MF_03030,TIGR00372,COG2887	N/A	N/A	N/A	N/A
PHROG	UHGV-1457919_50	phrog_7838	141.2	5.20022e-42	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1457919_50	UniRef90_A0A8D9UGW3	222.0	0	DNA repair protein RAD52-like protein	N/A
eggNOG-mapper	UHGV-1457919_50	742767.HMPREF9456_02397	207.0	0	N/A	N/A
structural_annotation	UHGV-1457919_50	PF04098,TIGR00607,COG5055	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1457919	Yes	34,420	42	92	1