vOTU vOTU-076741

vOTU: vOTU-076741

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-076741
Number of genomes	1
Taxonomy (ICTV)
Taxonomy (UHGV)	vFAM-00004 → vSUBFAM-00013 → vGENUS-09836 → vSUBGEN-12121 → vOTU-076741
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium
Host range breadth	Genus
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0016093
Biosample ID	SAMEA4765612
Genome length (bp)	39,984 bps
CheckV completeness	94.86% (High-quality)
CDS count	69
CDS density	90.87%
tRNA count	2
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium	Total connections	335	Host agreement	99.1
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 94.86)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0016093_1	phrog_4433	156.0	0	N/A	unknown function
UniRef90	UHGV-0016093_1	UniRef90_A0A6M5C839	95.9	2.16e-21	Putative ADP-ribosyltransferase	N/A
eggNOG-mapper	UHGV-0016093_1	33035.JPJF01000122_gene2458	102.0	2.56e-23	regulation of DNA-templated transcription, elongation	N/A
COG	UHGV-0016093_1	COG5164	N/A	N/A	Transcription elongation factor SPT5	N/A
structural_annotation	UHGV-0016093_1	NF000318	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0016093_2	1121865.OMW_01950	72.4	9.24e-16	N/A	N/A
structural_annotation	UHGV-0016093_2	PF17516,NF007197	N/A	N/A	N/A	N/A
PHROG	UHGV-0016093_3	phrog_463	164.8	0	anti-repressor	transcription regulation
UniRef90	UHGV-0016093_3	UniRef90_A0A6N3I098	185.0	0	ORF6C domain protein	N/A
eggNOG-mapper	UHGV-0016093_3	411471.SUBVAR_04322	173.0	0	BRO family, N-terminal domain	N/A
Pfam	UHGV-0016093_3	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
Pfam	UHGV-0016093_3	PF10552	N/A	N/A	ORF6C domain	ORF6C
COG	UHGV-0016093_3	COG3617	N/A	N/A	Prophage antirepressor	N/A
eggNOG-mapper	UHGV-0016093_4	760568.Desku_0919	92.0	3e-20	N/A	N/A
structural_annotation	UHGV-0016093_4	PF03787,TIGR02581,COG1604	N/A	N/A	N/A	N/A
KOfam	UHGV-0016093_5	K07741	92.2	1.3e-26	antB; anti-repressor protein	N/A
PHROG	UHGV-0016093_5	phrog_63	186.7	0	anti-repressor Ant	transcription regulation
UniRef90	UHGV-0016093_5	UniRef90_A0A844D5R9	384.0	0	Phage regulatory protein/antirepressor Ant	N/A
eggNOG-mapper	UHGV-0016093_5	1449343.JQLQ01000002_gene1368	232.0	0	Phage regulatory protein Rha (Phage_pRha)	N/A
Pfam	UHGV-0016093_5	PF09669	N/A	N/A	Phage regulatory protein Rha (Phage_pRha)	Phage_pRha
Pfam	UHGV-0016093_5	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
NCBIFam	UHGV-0016093_5	TIGR02681.1	N/A	N/A	phage regulatory protein, Rha family	N/A
COG	UHGV-0016093_5	COG3645	N/A	N/A	Phage antirepressor protein YoqD, KilAC domain	N/A
structural_annotation	UHGV-0016093_5	PF03374,PF09669,TIGR02681,COG3645,COG3561	N/A	N/A	N/A	N/A
UniRef90	UHGV-0016093_6	UniRef90_A0A1C7FQD9	78.2	1.62e-17	Transcriptional regulator	N/A
structural_annotation	UHGV-0016093_6	PF13560,NF041951,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-0016093_7	phrog_8	41.2	0.000000000031	transcriptional regulator	transcription regulation
UniRef90	UHGV-0016093_7	UniRef90_UPI001CBE4822	94.7	4.91e-23	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0016093_7	1226322.HMPREF1545_00148	77.0	9.07e-17	Transcriptional	N/A
Pfam	UHGV-0016093_7	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0016093_7	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0016093_7	PF01381,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-0016093_9	phrog_4980	114.2	3.1e-34	superinfection exclusion	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0016093_9	UniRef90_UPI000F643789	81.3	6.31e-16	Ltp family lipoprotein	N/A
eggNOG-mapper	UHGV-0016093_9	428127.EUBDOL_01530	75.5	0.000000000000128	Host cell surface-exposed lipoprotein	N/A
Pfam	UHGV-0016093_9	PF13240	N/A	N/A	zinc-ribbon domain	zinc_ribbon_2
Pfam	UHGV-0016093_9	PF07553	N/A	N/A	Host cell surface-exposed lipoprotein	Lipoprotein_Ltp
COG	UHGV-0016093_9	COG3064	N/A	N/A	Membrane protein TolA involved in colicin uptake	N/A
structural_annotation	UHGV-0016093_9	PF02631,MF_01114,NF001062,COG2137	N/A	N/A	N/A	N/A
UniRef90	UHGV-0016093_12	UniRef90_UPI0018CC79B4	323.0	0	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0016093_12	266265.Bxe_A3948	50.8	0.00000354	Helix-turn-helix domain	N/A
Pfam	UHGV-0016093_12	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0016093_12	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0016093_12	PF13560,MF_00535,NF041951,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0016093_13	K14059	143.6	2.10055e-42	int; integrase	N/A
PHROG	UHGV-0016093_13	phrog_1	165.7	0	integrase	integration and excision
UniRef90	UHGV-0016093_13	UniRef90_A0A6N7TNQ4	735.0	0	Tyrosine-type recombinase/integrase	N/A
eggNOG-mapper	UHGV-0016093_13	411471.SUBVAR_05137	260.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0016093_13	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0016093_13	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-0016093_13	PF00589,MF_01808,NF007246,COG4974	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0016093_15	PF12510	N/A	N/A	N/A	N/A
PHROG	UHGV-0016093_16	phrog_20016	195.9	0	N/A	unknown function
UniRef90	UHGV-0016093_16	UniRef90_A0A285PT46	202.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-0016093_16	1226322.HMPREF1545_00077	175.0	0	N/A	N/A
structural_annotation	UHGV-0016093_16	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-0016093_17	phrog_16490	192.5	0	N/A	unknown function
eggNOG-mapper	UHGV-0016093_17	397290.C810_01328	136.0	1.65e-35	N/A	N/A
PHROG	UHGV-0016093_18	phrog_22984	71.1	1.3e-20	N/A	unknown function
PHROG	UHGV-0016093_19	phrog_21718	85.8	4.9e-25	N/A	unknown function
eggNOG-mapper	UHGV-0016093_19	397290.C810_05210	78.6	3.18e-16	N/A	N/A
PHROG	UHGV-0016093_20	phrog_3754	98.2	7.4e-29	N/A	unknown function
eggNOG-mapper	UHGV-0016093_20	1235790.C805_00054	108.0	1.27e-28	N/A	N/A
UniRef90	UHGV-0016093_23	UniRef90_A0A1Q9JGI6	116.0	1.01e-30	RHH_1 domain-containing protein	N/A
eggNOG-mapper	UHGV-0016093_23	1118055.CAGU01000028_gene99	110.0	3.31e-29	N/A	N/A
structural_annotation	UHGV-0016093_23	PF03869,NF041793,COG4691	N/A	N/A	N/A	N/A
PHROG	UHGV-0016093_25	phrog_15303	122.9	1e-36	N/A	unknown function
KOfam	UHGV-0016093_27	K07273	180.1	0	acm; lysozyme	N/A
PHROG	UHGV-0016093_27	phrog_291	150.1	1.54143e-44	endolysin	lysis
UniRef90	UHGV-0016093_27	UniRef90_E2ZES5	331.0	0	Glycosyl hydrolase family 25	N/A
eggNOG-mapper	UHGV-0016093_27	748224.HMPREF9436_00154	331.0	0	hydrolase, family 25	N/A
Pfam	UHGV-0016093_27	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-0016093_27	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-0016093_27	PF01183,COG3757	N/A	N/A	N/A	N/A
PHROG	UHGV-0016093_28	phrog_28526	100.5	6.8e-30	N/A	unknown function
UniRef90	UHGV-0016093_28	UniRef90_UPI00156FE2AD	75.9	2.89e-17	N/A	N/A
eggNOG-mapper	UHGV-0016093_28	748224.HMPREF9436_00155	83.6	4.28e-21	N/A	N/A
UniRef90	UHGV-0016093_31	UniRef90_A0A1M6MWV9	75.9	0.000000000000199	Phage tail protein	N/A
eggNOG-mapper	UHGV-0016093_31	1111121.HMPREF1247_1241	69.7	0.00000000000577	N/A	N/A
structural_annotation	UHGV-0016093_31	PF05709,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0016093_34	phrog_3558	269.1	0	tail protein	tail
UniRef90	UHGV-0016093_34	UniRef90_A0A3E2U3C8	848.0	0	Prophage_tail domain-containing protein	N/A
eggNOG-mapper	UHGV-0016093_34	411465.PEPMIC_00746	127.0	4.69e-28	Prophage endopeptidase tail	N/A
Pfam	UHGV-0016093_34	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-0016093_34	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0016093_34	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0016093_34	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0016093_35	phrog_28775	120.0	1.7e-35	tail length tape measure protein	tail
UniRef90	UHGV-0016093_35	UniRef90_A0A6N7TLD3	705.0	0	Tape measure protein	N/A
eggNOG-mapper	UHGV-0016093_35	1492737.FEM08_12070	147.0	3.3e-34	tape measure	N/A
Pfam	UHGV-0016093_35	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-0016093_35	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-0016093_35	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-0016093_35	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0016093_38	phrog_885	70.8	1.5e-20	major tail protein	tail
eggNOG-mapper	UHGV-0016093_38	1111121.HMPREF1247_0789	172.0	0	N/A	N/A
structural_annotation	UHGV-0016093_38	PF06488,TIGR01603,COG5437	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0016093_39	PF13554	N/A	N/A	N/A	N/A
PHROG	UHGV-0016093_40	phrog_17977	40.6	0.000000000035	N/A	unknown function
UniRef90	UHGV-0016093_40	UniRef90_A0A844DHJ8	119.0	2.31e-32	Phage head closure protein	N/A
structural_annotation	UHGV-0016093_40	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0016093_42	phrog_544	116.2	2.8e-34	major head protein	head and packaging
UniRef90	UHGV-0016093_42	UniRef90_A0A1C6B5R0	330.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0016093_42	476272.RUMHYD_01776	291.0	0	N/A	N/A
structural_annotation	UHGV-0016093_42	PF03864,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0016093_43	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-0016093_44	phrog_478	127.2	6.1e-38	site-specific recombination directionality factor RDF	integration and excision
UniRef90	UHGV-0016093_44	UniRef90_A0A373Q857	165.0	0	YopX domain-containing protein	N/A
eggNOG-mapper	UHGV-0016093_44	1111121.HMPREF1247_0834	97.8	1.96e-24	N/A	N/A
PHROG	UHGV-0016093_46	phrog_5	42.3	0.000000000016	tail completion or Neck1 protein	connector
UniRef90	UHGV-0016093_46	UniRef90_A0A6N7TNP6	266.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0016093_46	268407.PWYN_03010	71.6	0.0000000000000757	Bacteriophage HK97-gp10, putative tail-component	N/A
Pfam	UHGV-0016093_46	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-0016093_46	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-0016093_48	phrog_8680	198.9	0	N/A	unknown function
UniRef90	UHGV-0016093_48	UniRef90_A0A844D688	450.0	0	N/A	N/A
eggNOG-mapper	UHGV-0016093_48	1423790.BN53_04265	176.0	0	Belongs to the N(4) N(6)-methyltransferase family	N/A
Pfam	UHGV-0016093_48	PF14386	N/A	N/A	N/A	DUF4417
COG	UHGV-0016093_48	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-0016093_48	PF14386	N/A	N/A	N/A	N/A
PHROG	UHGV-0016093_50	phrog_2468	80.7	1.2e-23	head morphogenesis	head and packaging
UniRef90	UHGV-0016093_50	UniRef90_A0A6N7TLR7	594.0	0	Phage_Mu_F domain-containing protein	N/A
eggNOG-mapper	UHGV-0016093_50	1504822.CCNO01000013_gene286	112.0	3.68e-24	cell adhesion	N/A
Pfam	UHGV-0016093_50	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
COG	UHGV-0016093_50	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0016093_50	PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-0016093_51	phrog_2118	101.6	7.7e-30	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0016093_51	UniRef90_A0A417HX51	170.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-0016093_51	610130.Closa_0730	120.0	1.24e-33	HNH endonuclease	N/A
Pfam	UHGV-0016093_51	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-0016093_51	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-0016093_51	TIGR02646,COG1403	N/A	N/A	N/A	N/A
PHROG	UHGV-0016093_52	phrog_64	124.7	2.2e-37	portal protein	head and packaging
UniRef90	UHGV-0016093_52	UniRef90_A0A6N7TNT3	506.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0016093_52	1423754.BALY01000011_gene289	77.4	0.00000000000231	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0016093_52	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0016093_52	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
KOfam	UHGV-0016093_53	K06909	333.8	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0016093_53	phrog_3717	137.1	8.69996e-41	terminase large subunit	head and packaging
UniRef90	UHGV-0016093_53	UniRef90_UPI001959424A	503.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0016093_53	665956.HMPREF1032_02957	473.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-0016093_53	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-0016093_53	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-0016093_53	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0016093_53	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0016093_53	PF04466,PF17288,PF03592,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0016093_54	phrog_36	54.3	0.0000000000000023	transcriptional regulator	transcription regulation
structural_annotation	UHGV-0016093_54	PF07374,MF_00245,TIGR01636,COG2739	N/A	N/A	N/A	N/A
KOfam	UHGV-0016093_56	K01160	57.3	4.3e-16	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-0016093_56	phrog_34	60.8	2.8e-17	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0016093_56	UniRef90_A0A6N7TND6	213.0	0	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-0016093_56	875454.BAEW01000002_gene491	136.0	8.95e-40	Endodeoxyribonuclease RusA	N/A
Pfam	UHGV-0016093_56	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-0016093_56	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-0016093_56	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0016093_62	PF11417	N/A	N/A	N/A	N/A
PHROG	UHGV-0016093_63	phrog_15768	120.7	1.3e-35	N/A	unknown function
UniRef90	UHGV-0016093_63	UniRef90_A0A844D5V0	175.0	0	DnaD domain protein	N/A
eggNOG-mapper	UHGV-0016093_63	748224.HMPREF9436_03357	129.0	1.48e-33	N/A	N/A
Pfam	UHGV-0016093_63	PF19808	N/A	N/A	N/A	DUF6291
structural_annotation	UHGV-0016093_63	PF19808	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0016093_65	PF09537	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0016093_66	PF12270,NF040944	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0016093_67	PF10743,NF033787	N/A	N/A	N/A	N/A
PHROG	UHGV-0016093_69	phrog_27197	78.3	5.4e-25	N/A	unknown function
eggNOG-mapper	UHGV-0016093_69	445970.ALIPUT_01592	60.1	0.00000000638	DNA-templated transcription, initiation	N/A
COG	UHGV-0016093_69	COG1595	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	N/A
structural_annotation	UHGV-0016093_69	NF007410	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0016093	Yes	39,984	54	95	1