vOTU vOTU-076895

vOTU: vOTU-076895

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-076895
Number of genomes	7
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Faecalimonas → Faecalimonas phoceensis
Taxonomy (UHGV)	vFAM-00003 → vSUBFAM-01430 → vGENUS-23447 → vSUBGEN-46061 → vOTU-076895
Host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Faecalimonas → Faecalimonas phoceensis
Host range breadth	Species
Lifestyle	temperate (Evidence: geNomad)

Representative genome
Genome ID	UHGV-0192311
Biosample ID	SAMN05827145
Genome length (bp)	32,731 bps
CheckV completeness	93.31% (High-quality)
CDS count	56
CDS density	93.66%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Faecalimonas → Faecalimonas phoceensis	Total connections	294	Host agreement	82.99
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Faecalimonas → Faecalimonas phoceensis	Total connections	6	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 93.31)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0192311_1	K18830	49.1	0.00000000000011	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-0192311_1	phrog_4	45.7	0.0000000000015	transcriptional repressor	transcription regulation
UniRef90	UHGV-0192311_1	UniRef90_UPI001BC85B83	134.0	4.63e-38	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0192311_1	411471.SUBVAR_05818	99.4	3.31e-25	sequence-specific DNA binding	N/A
Pfam	UHGV-0192311_1	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0192311_1	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0192311_1	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
UniRef90	UHGV-0192311_9	UniRef90_A0A894KJ06	65.5	0.00000000000165	Type II secretory pathway component PulF-like protein	N/A
PHROG	UHGV-0192311_11	phrog_3584	142.8	1.99965e-42	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0192311_11	1280698.AUJS01000007_gene1013	337.0	0	N/A	N/A
structural_annotation	UHGV-0192311_11	PF21578,NF041486	N/A	N/A	N/A	N/A
KOfam	UHGV-0192311_12	K03469	61.4	1.9e-17	rnhA, RNASEH1; ribonuclease HI [EC:3.1.26.4]	N/A
PHROG	UHGV-0192311_12	phrog_531	63.7	3.3e-18	Rnase H	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0192311_12	UniRef90_A0A894KKE1	317.0	0	RNase H type-1 domain-containing protein	N/A
eggNOG-mapper	UHGV-0192311_12	717605.Theco_3053	65.1	0.0000000000426	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids	N/A
Pfam	UHGV-0192311_12	PF00075	N/A	N/A	RNase H	RNase_H
COG	UHGV-0192311_12	COG0328	N/A	N/A	Ribonuclease HI	N/A
structural_annotation	UHGV-0192311_12	PF00075,MF_00042,NF001236,COG0328	N/A	N/A	N/A	N/A
PHROG	UHGV-0192311_13	phrog_26445	53.5	0.0000000000000043	N/A	unknown function
eggNOG-mapper	UHGV-0192311_14	1235792.C808_00065	240.0	0	N/A	N/A
PHROG	UHGV-0192311_15	phrog_8470	394.1	0	N/A	unknown function
UniRef90	UHGV-0192311_15	UniRef90_UPI001D086F83	947.0	0	PcfJ domain-containing protein	N/A
eggNOG-mapper	UHGV-0192311_15	1235792.C808_00066	1119.0	0	PcfJ-like protein	N/A
Pfam	UHGV-0192311_15	PF14284	N/A	N/A	PcfJ-like protein	PcfJ
structural_annotation	UHGV-0192311_15	PF14284	N/A	N/A	N/A	N/A
PHROG	UHGV-0192311_16	phrog_15077	109.4	9.4e-35	N/A	unknown function
UniRef90	UHGV-0192311_16	UniRef90_UPI001D0741A0	204.0	0	N/A	N/A
eggNOG-mapper	UHGV-0192311_16	97139.C824_05986	329.0	0	N/A	N/A
structural_annotation	UHGV-0192311_16	PF11300,NF033725	N/A	N/A	N/A	N/A
PHROG	UHGV-0192311_17	phrog_7566	111.8	2.3e-33	N/A	unknown function
eggNOG-mapper	UHGV-0192311_17	97139.C824_00037	130.0	4.21e-37	N/A	N/A
KOfam	UHGV-0192311_19	K01356	41.2	0.000000000034	lexA; repressor LexA [EC:3.4.21.88]	N/A
PHROG	UHGV-0192311_19	phrog_3502	41.6	0.000000000024	N/A	unknown function
UniRef90	UHGV-0192311_19	UniRef90_A0A174J3W3	71.6	0.00000000000000825	LexA repressor	N/A
eggNOG-mapper	UHGV-0192311_19	545697.HMPREF0216_00360	53.5	0.0000000232	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair	N/A
Pfam	UHGV-0192311_19	PF01726	N/A	N/A	LexA DNA binding domain	LexA_DNA_bind
COG	UHGV-0192311_19	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
structural_annotation	UHGV-0192311_19	PF01726,MF_00732,NF006812,COG3388	N/A	N/A	N/A	N/A
PHROG	UHGV-0192311_20	phrog_16351	62.8	7.4e-19	DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0192311_20	UniRef90_UPI001D072F7E	85.9	3.16e-17	N/A	N/A
eggNOG-mapper	UHGV-0192311_20	742723.HMPREF9477_00922	62.0	0.000000000404	N/A	N/A
PHROG	UHGV-0192311_21	phrog_15471	46.6	0.00000000000042	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0192311_21	UniRef90_A0A2N5NVP1	303.0	0	HNHc domain-containing protein	N/A
Pfam	UHGV-0192311_21	PF13392	N/A	N/A	HNH endonuclease	HNH_3
structural_annotation	UHGV-0192311_21	PF13392	N/A	N/A	N/A	N/A
PHROG	UHGV-0192311_23	phrog_8684	115.4	9.2e-35	N/A	unknown function
UniRef90	UHGV-0192311_23	UniRef90_A0A372UJN3	158.0	0	YopX domain-containing protein	N/A
eggNOG-mapper	UHGV-0192311_23	397290.C810_01526	121.0	1.3e-33	YopX protein	N/A
Pfam	UHGV-0192311_23	PF09643	N/A	N/A	YopX protein	YopX
NCBIFam	UHGV-0192311_23	TIGR01671.1	N/A	N/A	phage conserved hypothetical protein TIGR01671	N/A
structural_annotation	UHGV-0192311_23	PF09643,TIGR01671	N/A	N/A	N/A	N/A
PHROG	UHGV-0192311_26	phrog_36	56.7	5.2e-16	transcriptional regulator	transcription regulation
UniRef90	UHGV-0192311_26	UniRef90_R6ZAS5	124.0	2.94e-33	GED domain-containing protein	N/A
eggNOG-mapper	UHGV-0192311_26	742765.HMPREF9457_02116	153.0	0	N/A	N/A
structural_annotation	UHGV-0192311_26	PF02996	N/A	N/A	N/A	N/A
PHROG	UHGV-0192311_27	phrog_338	109.7	3.2e-32	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0192311_27	UniRef90_UPI0015708A7C	209.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-0192311_27	1280698.AUJS01000007_gene1032	205.0	0	HNH endonuclease domain protein	N/A
Pfam	UHGV-0192311_27	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-0192311_27	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-0192311_27	PF01844	N/A	N/A	N/A	N/A
PHROG	UHGV-0192311_28	phrog_104	264.5	0	portal protein	head and packaging
UniRef90	UHGV-0192311_28	UniRef90_A0A1C5MKT6	649.0	0	Phage portal protein, SPP1 Gp6-like	N/A
eggNOG-mapper	UHGV-0192311_28	665950.HMPREF1025_02537	650.0	0	Phage portal protein, SPP1 Gp6-like	N/A
structural_annotation	UHGV-0192311_28	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
PHROG	UHGV-0192311_29	phrog_2494	313.7	0	minor head protein	head and packaging
UniRef90	UHGV-0192311_29	UniRef90_A0A1C5MKJ0	306.0	0	Ntox50 domain-containing protein	N/A
eggNOG-mapper	UHGV-0192311_29	665950.HMPREF1025_02536	292.0	0	N/A	N/A
PHROG	UHGV-0192311_30	phrog_17688	344.5	0	N/A	unknown function
UniRef90	UHGV-0192311_30	UniRef90_A0A1C5Y909	739.0	0	Phage terminase-like protein, large subunit	N/A
eggNOG-mapper	UHGV-0192311_30	665950.HMPREF1025_02532	774.0	0	phage terminase, large subunit	N/A
COG	UHGV-0192311_30	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0192311_30	PF20441,PF03354,MF_04146,NF033889,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0192311_31	phrog_233	94.8	1.2e-27	head scaffolding protein	head and packaging
UniRef90	UHGV-0192311_31	UniRef90_UPI001961E2FD	122.0	1.49e-32	N/A	N/A
eggNOG-mapper	UHGV-0192311_31	665950.HMPREF1025_02531	127.0	1.35e-35	N/A	N/A
Pfam	UHGV-0192311_31	PF14265	N/A	N/A	N/A	DUF4355
structural_annotation	UHGV-0192311_31	PF14265	N/A	N/A	N/A	N/A
PHROG	UHGV-0192311_32	phrog_32396	145.3	1.20512e-43	N/A	unknown function
UniRef90	UHGV-0192311_32	UniRef90_A0A1C5MLP2	486.0	0	Phage capsid family	N/A
eggNOG-mapper	UHGV-0192311_32	665950.HMPREF1025_02530	520.0	0	Phage capsid family	N/A
structural_annotation	UHGV-0192311_32	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0192311_34	phrog_137	109.0	2.3e-32	head-tail adaptor Ad1	connector
UniRef90	UHGV-0192311_34	UniRef90_A0A8B6J3T0	180.0	0	Phage Gp19/Gp15/Gp42 family protein	N/A
eggNOG-mapper	UHGV-0192311_34	663952.SDD27957_07255	178.0	0	Phage protein Gp19/Gp15/Gp42	N/A
Pfam	UHGV-0192311_34	PF09355	N/A	N/A	N/A	Phage_Gp19
structural_annotation	UHGV-0192311_34	PF09355	N/A	N/A	N/A	N/A
PHROG	UHGV-0192311_35	phrog_501	91.7	6.7e-27	head closure Hc1	connector
eggNOG-mapper	UHGV-0192311_35	665950.HMPREF1025_02528	159.0	0	N/A	N/A
structural_annotation	UHGV-0192311_35	PF12206,COG5614	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0192311_36	908337.HMPREF9257_0534	50.4	0.000000229	N/A	N/A
PHROG	UHGV-0192311_37	phrog_123	55.0	0.0000000000000016	tail terminator	connector
eggNOG-mapper	UHGV-0192311_37	1280698.AUJS01000007_gene1043	134.0	2e-39	N/A	N/A
structural_annotation	UHGV-0192311_37	PF06141	N/A	N/A	N/A	N/A
PHROG	UHGV-0192311_38	phrog_117	180.0	0	major tail protein	tail
UniRef90	UHGV-0192311_38	UniRef90_UPI00156E6ACC	274.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-0192311_38	665950.HMPREF1025_02525	276.0	0	domain, Protein	N/A
COG	UHGV-0192311_38	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0192311_38	PF04630,TIGR01603,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0192311_39	phrog_1526	96.9	1.3e-28	N/A	unknown function
eggNOG-mapper	UHGV-0192311_39	665950.HMPREF1025_02524	97.1	2.42e-25	N/A	N/A
PHROG	UHGV-0192311_40	phrog_1633	64.3	2.2e-18	N/A	unknown function
UniRef90	UHGV-0192311_40	UniRef90_UPI0006C2F0F2	81.3	4.28e-18	N/A	N/A
eggNOG-mapper	UHGV-0192311_40	665950.HMPREF1025_02523	82.8	1.83e-19	N/A	N/A
Pfam	UHGV-0192311_40	PF17318	N/A	N/A	N/A	DUF5361
structural_annotation	UHGV-0192311_40	PF17318	N/A	N/A	N/A	N/A
PHROG	UHGV-0192311_41	phrog_6900	249.9	0	tail length tape measure protein	tail
UniRef90	UHGV-0192311_41	UniRef90_A0A1C5Y9X6	518.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0192311_41	665950.HMPREF1025_02522	562.0	0	Phage tail tape measure protein, TP901 family	N/A
COG	UHGV-0192311_41	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0192311_41	PF20155,MF_04138,COG5281	N/A	N/A	N/A	N/A
PHROG	UHGV-0192311_42	phrog_33	51.6	0.000000000000024	distal tail protein Dit	tail
UniRef90	UHGV-0192311_42	UniRef90_UPI001F242491	265.0	0	phage tail family protein	N/A
eggNOG-mapper	UHGV-0192311_42	1280698.AUJS01000007_gene1048	245.0	0	N/A	N/A
structural_annotation	UHGV-0192311_42	PF16774,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0192311_43	phrog_538	200.7	0	minor tail protein	tail
UniRef90	UHGV-0192311_43	UniRef90_UPI001E30CCA1	307.0	0	siphovirus ReqiPepy6 Gp37-like family protein	N/A
eggNOG-mapper	UHGV-0192311_43	411468.CLOSCI_00276	283.0	0	N/A	N/A
Pfam	UHGV-0192311_43	PF14594	N/A	N/A	Siphovirus ReqiPepy6 Gp37-like protein	Sipho_Gp37
structural_annotation	UHGV-0192311_43	PF14594,TIGR01665,COG4379	N/A	N/A	N/A	N/A
PHROG	UHGV-0192311_44	phrog_9994	190.5	0	N/A	unknown function
UniRef90	UHGV-0192311_44	UniRef90_A0A7K3I4P1	127.0	1.22e-31	H_lectin domain-containing protein	N/A
eggNOG-mapper	UHGV-0192311_44	411468.CLOSCI_02412	100.0	7.64e-22	N/A	N/A
structural_annotation	UHGV-0192311_44	PF20747,NF012201	N/A	N/A	N/A	N/A
PHROG	UHGV-0192311_45	phrog_30034	111.5	1e-32	N/A	unknown function
eggNOG-mapper	UHGV-0192311_45	742723.HMPREF9477_00891	137.0	7.51001e-40	N/A	N/A
structural_annotation	UHGV-0192311_45	PF17642	N/A	N/A	N/A	N/A
PHROG	UHGV-0192311_46	phrog_1382	44.9	0.0000000000011	N/A	unknown function
NCBIFam	UHGV-0192311_46	NF040910.1	N/A	N/A	CD1375 family protein	N/A
structural_annotation	UHGV-0192311_46	NF040910	N/A	N/A	N/A	N/A
PHROG	UHGV-0192311_47	phrog_16164	245.0	0	N/A	unknown function
PHROG	UHGV-0192311_49	phrog_1382	66.6	1.5e-19	N/A	unknown function
eggNOG-mapper	UHGV-0192311_49	411461.DORFOR_00727	77.0	3.54e-18	N/A	N/A
PHROG	UHGV-0192311_50	phrog_1863	78.4	4.6e-23	N/A	unknown function
eggNOG-mapper	UHGV-0192311_50	1226322.HMPREF1545_04027	63.2	0.00000000000301	N/A	N/A
PHROG	UHGV-0192311_51	phrog_18218	134.6	2.69999e-40	N/A	unknown function
UniRef90	UHGV-0192311_51	UniRef90_A0A3D0FFR6	147.0	5.60519e-44	Ribonuclease	N/A
eggNOG-mapper	UHGV-0192311_51	411902.CLOBOL_03424	80.1	4.73e-18	N/A	N/A
structural_annotation	UHGV-0192311_51	PF06946	N/A	N/A	N/A	N/A
PHROG	UHGV-0192311_52	phrog_872	95.4	6.9e-28	N/A	unknown function
UniRef90	UHGV-0192311_52	UniRef90_UPI001D071048	194.0	0	N/A	N/A
eggNOG-mapper	UHGV-0192311_52	397290.C810_05229	155.0	0	N/A	N/A
Pfam	UHGV-0192311_52	PF11195	N/A	N/A	N/A	DUF2829
dbAPIS	UHGV-0192311_52	APIS029	N/A	N/A	Tad2 is a "sponge" that sequesters the immune signaling molecules produced by Thoeris TIR-domain proteins in response to phage.	N/A
structural_annotation	UHGV-0192311_52	PF11195,PF14359,COG3613	N/A	N/A	N/A	N/A
KOfam	UHGV-0192311_53	K01447	109.6	3.7e-32	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0192311_53	phrog_3088	276.3	0	amidase	lysis
UniRef90	UHGV-0192311_53	UniRef90_A0A894KKA6	613.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-0192311_53	428125.CLOLEP_01782	331.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-0192311_53	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
COG	UHGV-0192311_53	COG5632	N/A	N/A	N-acetylmuramoyl-L-alanine amidase CwlA	N/A
structural_annotation	UHGV-0192311_53	PF01510,MF_04111,NF008758,COG5632	N/A	N/A	N/A	N/A
KOfam	UHGV-0192311_54	K06334	176.4	0	cotJC; spore coat protein JC	N/A
PHROG	UHGV-0192311_54	phrog_7573	146.3	1.59748e-43	N/A	unknown function
UniRef90	UHGV-0192311_54	UniRef90_R9JUP2	228.0	0	Spore coat protein JC	N/A
eggNOG-mapper	UHGV-0192311_54	1235792.C808_03178	228.0	0	Manganese containing catalase	N/A
Pfam	UHGV-0192311_54	PF05067	N/A	N/A	Manganese containing catalase	Mn_catalase
COG	UHGV-0192311_54	COG3546	N/A	N/A	Mn-containing catalase (includes spore coat protein CotJC)	N/A
structural_annotation	UHGV-0192311_54	PF05067,TIGR04535,COG3546	N/A	N/A	N/A	N/A
KOfam	UHGV-0192311_55	K06400	318.9	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-0192311_55	phrog_95	332.0	0	integrase	integration and excision
UniRef90	UHGV-0192311_55	UniRef90_A0A1Y4SEU2	582.0	0	Recombinase family protein	N/A
eggNOG-mapper	UHGV-0192311_55	478749.BRYFOR_08826	830.0	0	resolvase	N/A
Pfam	UHGV-0192311_55	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-0192311_55	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-0192311_55	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-0192311_55	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0192311_55	PF07508,NF041201	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0192311_56	1235798.C817_00833	106.0	4.04e-30	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0192311	Yes	32,731	40	93	1
UHGV-1441257	No	20,039	40	57	1
UHGV-0073100	No	18,220	40	52	1
UHGV-1399486	No	18,220	40	52	1
UHGV-1701461	No	17,439	40	50	1
UHGV-1769125	No	17,414	40	49	1
UHGV-1615960	No	13,386	39	38	1