vOTU vOTU-077159

vOTU: vOTU-077159

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-077159
Number of genomes	1
Taxonomy (ICTV)
Taxonomy (UHGV)	vFAM-00153 → vSUBFAM-01424 → vGENUS-01899 → vSUBGEN-38321 → vOTU-077159
Host lineage	Bacteria → Bacteroidota → Bacteroidia → Bacteroidales → Bacteroidaceae → Phocaeicola → Phocaeicola sp000434735
Host range breadth	Species
Lifestyle	lytic (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1476695
Biosample ID	SAMEA3182106
Genome length (bp)	46,447 bps
CheckV completeness	99.83% (High-quality)
CDS count	50
CDS density	94.05%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Bacteroidota → Bacteroidia → Bacteroidales → Bacteroidaceae → Phocaeicola → Phocaeicola sp000434735	Total connections	2	Host agreement	100
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 99.83)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-1476695_1	K07497	56.6	5.6e-16	K07497; putative transposase	N/A
PHROG	UHGV-1476695_1	phrog_8463	109.7	2.4e-32	transposase	integration and excision
UniRef90	UHGV-1476695_1	UniRef90_A0A1Q6RLB1	433.0	0	Integrase catalytic domain-containing protein	N/A
eggNOG-mapper	UHGV-1476695_1	1123307.KB904367_gene1244	233.0	0	Transposase and inactivated derivatives	N/A
Pfam	UHGV-1476695_1	PF01527	N/A	N/A	Transposase	HTH_Tnp_1
Pfam	UHGV-1476695_1	PF00665	N/A	N/A	Integrase core domain	rve
Pfam	UHGV-1476695_1	PF13683	N/A	N/A	Integrase core domain	rve_3
COG	UHGV-1476695_1	COG2801	N/A	N/A	Transposase InsO and inactivated derivatives	N/A
structural_annotation	UHGV-1476695_1	PF00665,PF13518,NF033577,COG2801	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1476695_7	1235797.C816_04174	125.0	6.84e-34	N/A	N/A
PHROG	UHGV-1476695_9	phrog_4440	56.3	5.3e-18	tail fiber protein	tail
UniRef90	UHGV-1476695_9	UniRef90_UPI000E4B80F2	73.6	0.00000000000798	collagen-like protein	N/A
eggNOG-mapper	UHGV-1476695_9	290402.Cbei_3387	84.3	2.5e-16	N/A	N/A
PHROG	UHGV-1476695_10	phrog_6468	63.5	1.4e-18	tail fiber protein; host specificity	tail
eggNOG-mapper	UHGV-1476695_10	762982.HMPREF9442_01191	68.2	0.000000000439	cellulase activity	N/A
COG	UHGV-1476695_10	COG4733	N/A	N/A	Phage-related protein, tail protein J	N/A
eggNOG-mapper	UHGV-1476695_11	1232449.BAHV02000016_gene1816	184.0	0	N/A	N/A
structural_annotation	UHGV-1476695_11	PF11134,TIGR04312,COG3823	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1476695_12	PF20387,NF038128,COG5156	N/A	N/A	N/A	N/A
PHROG	UHGV-1476695_13	phrog_371	70.8	1.6e-20	major head protein	head and packaging
eggNOG-mapper	UHGV-1476695_13	1226322.HMPREF1545_03848	134.0	1.6e-33	N/A	N/A
structural_annotation	UHGV-1476695_13	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1476695_14	phrog_24113	87.4	1.1e-25	N/A	unknown function
eggNOG-mapper	UHGV-1476695_14	1226322.HMPREF1545_03847	70.1	0.000000000000193	N/A	N/A
structural_annotation	UHGV-1476695_14	PF11133,COG5471	N/A	N/A	N/A	N/A
PHROG	UHGV-1476695_19	phrog_22978	247.2	0	N/A	unknown function
eggNOG-mapper	UHGV-1476695_19	1410650.JHWL01000003_gene2814	297.0	0	N/A	N/A
Pfam	UHGV-1476695_19	PF18812	N/A	N/A	phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease3	PBECR3
Pfam	UHGV-1476695_19	PF18760	N/A	N/A	ADP-Ribosyltransferase in polyvalent proteins	ART-PolyVal
Pfam	UHGV-1476695_19	PF18814	N/A	N/A	phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease5	PBECR5
PHROG	UHGV-1476695_21	phrog_156	202.5	0	portal protein	head and packaging
eggNOG-mapper	UHGV-1476695_21	1519439.JPJG01000060_gene1886	405.0	0	N/A	N/A
structural_annotation	UHGV-1476695_21	PF16510,MF_04120,TIGR01542,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-1476695_22	K21523	70.3	1.4e-20	gp17; terminase, large subunit [EC:3.1.-.-]	N/A
PHROG	UHGV-1476695_22	phrog_2	99.6	4.7e-29	terminase large subunit	head and packaging
UniRef90	UHGV-1476695_22	UniRef90_UPI001F401ABC	399.0	0	terminase family protein	N/A
eggNOG-mapper	UHGV-1476695_22	696281.Desru_1088	192.0	0	Phage terminase large subunit	N/A
COG	UHGV-1476695_22	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1476695_22	PF03354,PF17289,MF_04146,TIGR01547,COG4373	N/A	N/A	N/A	N/A
PHROG	UHGV-1476695_23	phrog_3064	71.8	6.9e-21	terminase	head and packaging
UniRef90	UHGV-1476695_23	UniRef90_A0A2I7QK24	74.7	0.00000000000011	Coil containing protein (Fragment)	N/A
PHROG	UHGV-1476695_27	phrog_918	109.1	1.5e-32	N/A	unknown function
UniRef90	UHGV-1476695_27	UniRef90_UPI001D020797	121.0	4.21e-34	N/A	N/A
eggNOG-mapper	UHGV-1476695_27	1499683.CCFF01000014_gene3910	119.0	2.96e-34	N/A	N/A
Pfam	UHGV-1476695_27	PF19791	N/A	N/A	N/A	DUF6275
structural_annotation	UHGV-1476695_27	PF19791	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1476695_32	1235835.C814_01168	53.9	0.0000000107	N/A	N/A
PHROG	UHGV-1476695_35	phrog_9298	294.9	0	radical SAM domain protein	other
UniRef90	UHGV-1476695_35	UniRef90_UPI0019113502	538.0	0	radical SAM protein	N/A
eggNOG-mapper	UHGV-1476695_35	97138.C820_02863	323.0	0	N/A	N/A
COG	UHGV-1476695_35	COG1032	N/A	N/A	Radical SAM superfamily enzyme YgiQ, UPF0313 family	N/A
structural_annotation	UHGV-1476695_35	MF_01864,NF010916,COG2516	N/A	N/A	N/A	N/A
KOfam	UHGV-1476695_37	K00558	209.4	0	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-1476695_37	phrog_116	251.2	0	DNA methyltransferase	other
UniRef90	UHGV-1476695_37	UniRef90_A0A2Z4GUI8	608.0	0	Site-specific DNA methylase	N/A
eggNOG-mapper	UHGV-1476695_37	1519439.JPJG01000060_gene1872	492.0	0	Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family	N/A
PADLOC	UHGV-1476695_37	MTase_II_00164	84.9	2.3e-31	Type II methyltransferase	RM
Pfam	UHGV-1476695_37	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
COG	UHGV-1476695_37	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-1476695_37	PF00145,MF_00351,TIGR00675,COG0270	N/A	N/A	N/A	N/A
PHROG	UHGV-1476695_39	phrog_3136	108.6	2.2e-34	N/A	unknown function
UniRef90	UHGV-1476695_39	UniRef90_A0A6N7TMC2	106.0	4.54e-25	ASCH domain-containing protein	N/A
COG	UHGV-1476695_39	COG4933	N/A	N/A	Predicted transcriptional regulator, contains an HTH and PUA-like domains	N/A
structural_annotation	UHGV-1476695_39	PF12961,NF008917,COG4933	N/A	N/A	N/A	N/A
KOfam	UHGV-1476695_40	K03111	146.3	2.90069e-43	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1476695_40	phrog_44	137.5	8.19998e-41	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1476695_40	UniRef90_A0A2V2ET02	195.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1476695_40	1121423.JONT01000003_gene1118	117.0	4.38e-32	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	N/A
Pfam	UHGV-1476695_40	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1476695_40	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1476695_40	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1476695_40	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1476695_40	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
KOfam	UHGV-1476695_41	K03111	54.9	0.0000000000000017	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1476695_41	phrog_26861	88.8	2.3e-26	N/A	unknown function
UniRef90	UHGV-1476695_41	UniRef90_R6WJP8	174.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1476695_41	1304880.JAGB01000001_gene702	169.0	0	PFAM single-strand binding protein Primosomal replication protein n	N/A
Pfam	UHGV-1476695_41	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1476695_41	NF004476.0	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1476695_41	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1476695_41	PF00436,PF13567,MF_00984,NF004476,COG0629	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1476695_42	742817.HMPREF9449_01803	81.6	0.00000000000000113	N/A	N/A
structural_annotation	UHGV-1476695_42	PF14297,TIGR01714,COG3756	N/A	N/A	N/A	N/A
KOfam	UHGV-1476695_43	K01160	50.2	0.000000000000071	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-1476695_43	phrog_140	125.2	4.1e-37	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1476695_43	UniRef90_A0A350TIB2	117.0	5.56e-31	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-1476695_43	1123263.AUKY01000072_gene2102	107.0	8.69e-28	Endodeoxyribonuclease RusA	N/A
Pfam	UHGV-1476695_43	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-1476695_43	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-1476695_43	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
KOfam	UHGV-1476695_44	K07455	186.8	0	recT; recombination protein RecT	N/A
PHROG	UHGV-1476695_44	phrog_148	202.6	0	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1476695_44	UniRef90_UPI000F53F699	338.0	0	recombinase RecT	N/A
eggNOG-mapper	UHGV-1476695_44	1408437.JNJN01000039_gene372	290.0	0	RecT family	N/A
Pfam	UHGV-1476695_44	PF03837	N/A	N/A	RecT family	RecT
NCBIFam	UHGV-1476695_44	TIGR00616.1	N/A	N/A	recombinase, phage RecT family	N/A
COG	UHGV-1476695_44	COG3723	N/A	N/A	Recombinational DNA repair protein RecT	N/A
structural_annotation	UHGV-1476695_44	PF03837,TIGR00616,COG3723	N/A	N/A	N/A	N/A
PHROG	UHGV-1476695_45	phrog_674	152.5	2.8026e-45	N/A	unknown function
UniRef90	UHGV-1476695_45	UniRef90_A0A4P9C8L7	151.0	1.19e-40	N/A	N/A
eggNOG-mapper	UHGV-1476695_45	658655.HMPREF0988_02587	95.1	7.09e-20	N/A	N/A
Pfam	UHGV-1476695_45	PF07083	N/A	N/A	N/A	DUF1351
structural_annotation	UHGV-1476695_45	PF07083	N/A	N/A	N/A	N/A
PHROG	UHGV-1476695_46	phrog_434	144.8	6.40393e-43	RecE-like recombination exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1476695_46	UniRef90_A0A1W1YQ31	199.0	0	Putative phage-type endonuclease	N/A
eggNOG-mapper	UHGV-1476695_46	742765.HMPREF9457_02105	176.0	0	YqaJ viral recombinase family	N/A
Pfam	UHGV-1476695_46	PF09588	N/A	N/A	YqaJ-like viral recombinase domain	YqaJ
NCBIFam	UHGV-1476695_46	TIGR03033.1	N/A	N/A	putative phage-type endonuclease	N/A
COG	UHGV-1476695_46	COG5377	N/A	N/A	Phage-related protein, predicted endonuclease	N/A
structural_annotation	UHGV-1476695_46	PF09588,MF_03030,TIGR03033,COG5377	N/A	N/A	N/A	N/A
Pfam	UHGV-1476695_50	PF01402	N/A	N/A	Ribbon-helix-helix protein, copG family	RHH_1

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1476695	Yes	46,447	51	100	1