vOTU vOTU-077725

vOTU: vOTU-077725

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-077725
Number of genomes	10
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00004 → vSUBFAM-01336 → vGENUS-01727 → vSUBGEN-04334 → vOTU-077725
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → Lawsonibacter → Lawsonibacter sp900066825
Host range breadth	Species
Lifestyle	temperate (evidence: geNomad)

Representative genome
Genome ID	UHGV-0159635
Biosample ID	SAMN05971506
Genome length (bp)	39,321 bps
CheckV completeness	97.71% (High-quality)
CDS count	68
CDS density	94.29%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	PHIST
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae	Total connections	14	Host agreement	78.57
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → Lawsonibacter → Lawsonibacter sp900066825	Total connections	18	Host agreement	77.78

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 97.71)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0159635_1	K14059	220.5	0	int; integrase	N/A
PHROG	UHGV-0159635_1	phrog_1	220.2	0	integrase	integration and excision
UniRef90	UHGV-0159635_1	UniRef90_UPI0018A8CCD8	555.0	0	site-specific integrase	N/A
eggNOG-mapper	UHGV-0159635_1	1408437.JNJN01000039_gene380	177.0	0	Phage integrase, N-terminal SAM-like domain	N/A
Pfam	UHGV-0159635_1	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-0159635_1	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0159635_1	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0159635_1	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
KOfam	UHGV-0159635_2	K01174	165.3	0	nuc; micrococcal nuclease [EC:3.1.31.1]	N/A
PHROG	UHGV-0159635_2	phrog_20876	117.3	9.6e-35	nuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0159635_2	UniRef90_A0A140L9P1	310.0	0	Thermonuclease	N/A
eggNOG-mapper	UHGV-0159635_2	1089548.KI783301_gene2029	206.0	0	Staphylococcal nuclease homologues	N/A
PADLOC	UHGV-0159635_2	shah_acc_0212	82.2	8.6e-24	SNc+LTD	CRISPR-CAS
Pfam	UHGV-0159635_2	PF07833	N/A	N/A	Copper amine oxidase N-terminal domain	Cu_amine_oxidN1
Pfam	UHGV-0159635_2	PF00565	N/A	N/A	Staphylococcal nuclease homologue	SNase
COG	UHGV-0159635_2	COG1525	N/A	N/A	Endonuclease YncB, thermonuclease family	N/A
PHROG	UHGV-0159635_3	phrog_87	81.0	1.2e-23	metallo-protease	other
UniRef90	UHGV-0159635_3	UniRef90_A0A1Y3RG05	206.0	0	Peptidase_M78 domain-containing protein	N/A
eggNOG-mapper	UHGV-0159635_3	1007096.BAGW01000011_gene2354	138.0	3.94e-40	IrrE N-terminal-like domain	N/A
Pfam	UHGV-0159635_3	PF06114	N/A	N/A	IrrE N-terminal-like domain	Peptidase_M78
COG	UHGV-0159635_3	COG2856	N/A	N/A	Zn-dependent peptidase ImmA, M78 family	N/A
structural_annotation	UHGV-0159635_3	PF06114,COG2856	N/A	N/A	N/A	N/A
PHROG	UHGV-0159635_4	phrog_8	62.8	8.4e-18	transcriptional regulator	transcription regulation
UniRef90	UHGV-0159635_4	UniRef90_A0A1Y3RHT3	156.0	0	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0159635_4	1160721.RBI_I01471	96.7	2.83e-24	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-0159635_4	PF12844	N/A	N/A	Helix-turn-helix domain	HTH_19
structural_annotation	UHGV-0159635_4	PF12844,NF041951,COG1396	N/A	N/A	N/A	N/A
UniRef90	UHGV-0159635_5	UniRef90_A0A845R4W0	112.0	5.84e-31	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0159635_5	742738.HMPREF9460_02486	73.2	3.59e-16	N/A	N/A
structural_annotation	UHGV-0159635_5	PF13443,NF000090,COG1813	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0159635_9	PF12728,NF040990,COG3311	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0159635_11	PF13560	N/A	N/A	N/A	N/A
KOfam	UHGV-0159635_14	K19171	72.4	1.2e-21	dndD; DNA sulfur modification protein DndD	N/A
PHROG	UHGV-0159635_14	phrog_77	217.4	0	SbcC-like subunit of palindrome specific endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0159635_14	UniRef90_UPI001959E3D8	650.0	0	AAA family ATPase	N/A
eggNOG-mapper	UHGV-0159635_14	1203606.HMPREF1526_00309	406.0	0	nuclear chromosome segregation	N/A
Pfam	UHGV-0159635_14	PF13476	N/A	N/A	AAA domain	AAA_23
COG	UHGV-0159635_14	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
structural_annotation	UHGV-0159635_14	PF02463,MF_00449,NF041034,COG0419	N/A	N/A	N/A	N/A
PHROG	UHGV-0159635_15	phrog_862	53.8	0.0000000000000035	N/A	unknown function
UniRef90	UHGV-0159635_15	UniRef90_A0A2P9FIG4	55.1	0.00000996	N/A	N/A
eggNOG-mapper	UHGV-0159635_15	1203606.HMPREF1526_00310	195.0	0	N/A	N/A
structural_annotation	UHGV-0159635_15	PF05037,COG2965	N/A	N/A	N/A	N/A
KOfam	UHGV-0159635_16	K06167	69.6	4.4e-20	phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]	N/A
PHROG	UHGV-0159635_16	phrog_392	186.2	0	metal-dependent hydrolase	other
UniRef90	UHGV-0159635_16	UniRef90_UPI00195A5026	303.0	0	MBL fold metallo-hydrolase	N/A
eggNOG-mapper	UHGV-0159635_16	1203606.HMPREF1526_00311	192.0	0	Metallo-beta-lactamase superfamily	N/A
Pfam	UHGV-0159635_16	PF12706	N/A	N/A	Beta-lactamase superfamily domain	Lactamase_B_2
dbAPIS	UHGV-0159635_16	APIS058	N/A	N/A	N/A	N/A
COG	UHGV-0159635_16	COG1235	N/A	N/A	Phosphoribosyl 1,2-cyclic phosphate phosphodiesterase	N/A
structural_annotation	UHGV-0159635_16	PF02112,MF_01818,NF041851,COG1234	N/A	N/A	N/A	N/A
PHROG	UHGV-0159635_17	phrog_997	116.1	2.2e-34	replication terminator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0159635_17	UniRef90_R6MCS9	107.0	1.6e-27	N/A	N/A
eggNOG-mapper	UHGV-0159635_17	1519439.JPJG01000059_gene1910	140.0	1.90002e-41	N/A	N/A
PHROG	UHGV-0159635_18	phrog_1029	245.7	0	N/A	unknown function
eggNOG-mapper	UHGV-0159635_18	1203606.HMPREF1526_01890	260.0	0	N/A	N/A
structural_annotation	UHGV-0159635_18	PF10065,COG5532	N/A	N/A	N/A	N/A
PHROG	UHGV-0159635_19	phrog_2562	99.1	6.1e-29	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0159635_19	UniRef90_A0A1C6D5S6	266.0	0	N/A	N/A
eggNOG-mapper	UHGV-0159635_19	1235790.C805_00030	174.0	0	N/A	N/A
Pfam	UHGV-0159635_19	PF14297	N/A	N/A	Lin1244/Lin1753-like, N-terminal	Lin1244_N
COG	UHGV-0159635_19	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0159635_20	PF11417	N/A	N/A	N/A	N/A
PHROG	UHGV-0159635_22	phrog_4433	152.8	0	N/A	unknown function
UniRef90	UHGV-0159635_22	UniRef90_UPI00045B9709	102.0	2.65e-23	collagen-like protein	N/A
eggNOG-mapper	UHGV-0159635_22	645991.Sgly_0315	171.0	0	regulation of DNA-templated transcription, elongation	N/A
COG	UHGV-0159635_22	COG5164	N/A	N/A	Transcription elongation factor SPT5	N/A
structural_annotation	UHGV-0159635_22	PF12120,NF000318	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0159635_23	445972.ANACOL_00168	52.0	0.0000000348	N/A	N/A
structural_annotation	UHGV-0159635_24	PF11132	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0159635_27	PF19070	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0159635_28	318464.IO99_07375	79.7	4.45e-18	N/A	N/A
PHROG	UHGV-0159635_29	phrog_2245	48.2	0.00000000000019	nucleoside triphosphate pyrophosphohydrolase	other
structural_annotation	UHGV-0159635_29	NF001611,COG1694	N/A	N/A	N/A	N/A
PHROG	UHGV-0159635_32	phrog_2657	184.0	0	transcriptional regulator	transcription regulation
UniRef90	UHGV-0159635_32	UniRef90_A0A374AXT0	319.0	0	Rha family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0159635_32	411490.ANACAC_00702	286.0	0	phage regulatory protein, rha family	N/A
Pfam	UHGV-0159635_32	PF09669	N/A	N/A	Phage regulatory protein Rha (Phage_pRha)	Phage_pRha
NCBIFam	UHGV-0159635_32	TIGR02681.1	N/A	N/A	phage regulatory protein, Rha family	N/A
COG	UHGV-0159635_32	COG3646	N/A	N/A	Phage regulatory protein Rha	N/A
structural_annotation	UHGV-0159635_32	PF09669,TIGR02681,COG3646	N/A	N/A	N/A	N/A
KOfam	UHGV-0159635_34	K06909	123.1	3.1e-36	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0159635_34	phrog_10250	172.3	0	N/A	unknown function
UniRef90	UHGV-0159635_34	UniRef90_A0A3D3Y0N9	673.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0159635_34	1226322.HMPREF1545_00043	611.0	0	Phage terminase large subunit	N/A
Pfam	UHGV-0159635_34	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
NCBIFam	UHGV-0159635_34	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0159635_34	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0159635_34	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0159635_36	phrog_8680	225.1	0	N/A	unknown function
UniRef90	UHGV-0159635_36	UniRef90_A0A417QFZ0	262.0	0	N/A	N/A
eggNOG-mapper	UHGV-0159635_36	411470.RUMGNA_02208	234.0	0	N/A	N/A
Pfam	UHGV-0159635_36	PF14386	N/A	N/A	N/A	DUF4417
structural_annotation	UHGV-0159635_36	PF14386	N/A	N/A	N/A	N/A
PHROG	UHGV-0159635_37	phrog_64	162.5	0	portal protein	head and packaging
UniRef90	UHGV-0159635_37	UniRef90_A0A856HZB4	679.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0159635_37	1256908.HMPREF0373_00485	96.7	1.26e-18	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0159635_37	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0159635_37	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
PHROG	UHGV-0159635_38	phrog_2468	100.3	3.8e-30	head morphogenesis	head and packaging
UniRef90	UHGV-0159635_38	UniRef90_A0A810PSD3	463.0	0	Phage_Mu_F domain-containing protein	N/A
eggNOG-mapper	UHGV-0159635_38	1504822.CCNO01000013_gene286	191.0	0	cell adhesion	N/A
Pfam	UHGV-0159635_38	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
Pfam	UHGV-0159635_38	PF15542	N/A	N/A	Bacterial toxin 50	Ntox50
COG	UHGV-0159635_38	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0159635_38	PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-0159635_39	phrog_1865	41.1	0.000000000026	N/A	unknown function
structural_annotation	UHGV-0159635_39	PF07073,MF_00436,NF037951,COG4568	N/A	N/A	N/A	N/A
PHROG	UHGV-0159635_40	phrog_5	77.1	2.9e-22	tail completion or Neck1 protein	connector
UniRef90	UHGV-0159635_40	UniRef90_UPI0018AA0B5A	191.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0159635_40	1123309.AQYB01000018_gene814	92.0	4.36e-22	Bacteriophage HK97-gp10, putative tail-component	N/A
Pfam	UHGV-0159635_40	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
NCBIFam	UHGV-0159635_40	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
structural_annotation	UHGV-0159635_40	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0159635_41	PF18152	N/A	N/A	N/A	N/A
UniRef90	UHGV-0159635_42	UniRef90_A0A3E0B009	56.6	0.00000154	Minor structural protein GP20	N/A
structural_annotation	UHGV-0159635_42	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-0159635_43	phrog_544	191.6	0	major head protein	head and packaging
UniRef90	UHGV-0159635_43	UniRef90_A0A810PZM2	419.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0159635_43	1347392.CCEZ01000005_gene1236	277.0	0	N/A	N/A
structural_annotation	UHGV-0159635_43	PF03864,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
PHROG	UHGV-0159635_45	phrog_17977	72.7	3.8e-21	N/A	unknown function
UniRef90	UHGV-0159635_45	UniRef90_UPI00141211AB	95.5	3.84e-23	head-tail adaptor protein	N/A
structural_annotation	UHGV-0159635_45	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0159635_46	phrog_17405	48.5	0.00000000000014	head protein	head and packaging
UniRef90	UHGV-0159635_46	UniRef90_A0A415JI88	121.0	2.83e-33	N/A	N/A
structural_annotation	UHGV-0159635_46	PF11367	N/A	N/A	N/A	N/A
PHROG	UHGV-0159635_47	phrog_885	98.7	4.8e-29	major tail protein	tail
UniRef90	UHGV-0159635_47	UniRef90_UPI000BE41A82	58.5	0.000000623	chitobiase/beta-hexosaminidase C-terminal domain-containing protein	N/A
eggNOG-mapper	UHGV-0159635_47	1111121.HMPREF1247_0789	178.0	0	N/A	N/A
structural_annotation	UHGV-0159635_47	PF06488,TIGR01603,COG5437	N/A	N/A	N/A	N/A
UniRef90	UHGV-0159635_48	UniRef90_A0A285PXU7	79.0	3.03e-16	Consensus disorder prediction	N/A
PHROG	UHGV-0159635_50	phrog_3981	277.7	0	tail length tape measure protein	tail
eggNOG-mapper	UHGV-0159635_50	536233.CLO_1577	311.0	0	tape measure	N/A
COG	UHGV-0159635_50	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
structural_annotation	UHGV-0159635_50	MF_04138,COG5281	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0159635_51	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0159635_52	phrog_13879	486.4	0	N/A	unknown function
eggNOG-mapper	UHGV-0159635_52	1235797.C816_02659	731.0	0	N/A	N/A
structural_annotation	UHGV-0159635_52	PF14594,PF06588,NF033848,COG4379,COG5156	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0159635_53	693746.OBV_18220	59.7	0.0000000499	N/A	N/A
structural_annotation	UHGV-0159635_53	PF00354	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0159635_54	1226322.HMPREF1545_02881	58.5	0.00000047	cellulose 1,4-beta-cellobiosidase activity	N/A
COG	UHGV-0159635_54	COG5301	N/A	N/A	Phage-related tail fiber protein	N/A
UniRef90	UHGV-0159635_56	UniRef90_A0A8J6JAX9	53.1	0.0000000252	XkdX family protein	N/A
structural_annotation	UHGV-0159635_56	PF09693,TIGR01669	N/A	N/A	N/A	N/A
PHROG	UHGV-0159635_57	phrog_37604	186.2	0	N/A	unknown function
eggNOG-mapper	UHGV-0159635_57	1232443.BAIA02000078_gene10	132.0	1.53e-37	N/A	N/A
PHROG	UHGV-0159635_58	phrog_1129	63.7	2.3e-18	holin	lysis
UniRef90	UHGV-0159635_58	UniRef90_UPI001D084907	122.0	1.95e-34	phage holin family protein	N/A
eggNOG-mapper	UHGV-0159635_58	1007096.BAGW01000036_gene2663	109.0	3.7e-30	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-0159635_58	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0159635_58	PF06946	N/A	N/A	N/A	N/A
KOfam	UHGV-0159635_60	K01448	122.7	4.4e-36	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0159635_60	phrog_435	121.5	7.8e-36	endolysin	lysis
UniRef90	UHGV-0159635_60	UniRef90_UPI001C107E48	92.0	1.74e-16	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-0159635_60	1410668.JNKC01000001_gene1675	158.0	4.91996e-42	N-Acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-0159635_60	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
Pfam	UHGV-0159635_60	PF09992	N/A	N/A	Phosphodiester glycosidase	NAGPA
COG	UHGV-0159635_60	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0159635_60	PF01520,PF09992,PF01471,MF_00562,TIGR02883,COG0860,COG4632,COG3409	N/A	N/A	N/A	N/A
UniRef90	UHGV-0159635_61	UniRef90_U2R3E6	75.9	1.72e-16	KORA domain-containing protein	N/A
structural_annotation	UHGV-0159635_61	PF16509,MF_00674,NF008895,COG2739	N/A	N/A	N/A	N/A
PHROG	UHGV-0159635_63	phrog_3754	109.6	2.6e-32	N/A	unknown function
eggNOG-mapper	UHGV-0159635_63	476272.RUMHYD_01764	182.0	0	N/A	N/A
PHROG	UHGV-0159635_64	phrog_21718	118.4	4.9e-35	N/A	unknown function
UniRef90	UHGV-0159635_64	UniRef90_A0A285PT36	66.6	0.000000000068	Consensus disorder prediction	N/A
eggNOG-mapper	UHGV-0159635_64	397290.C810_05210	73.2	0.0000000000000408	N/A	N/A
PHROG	UHGV-0159635_65	phrog_22984	109.2	1.9e-32	N/A	unknown function
PHROG	UHGV-0159635_66	phrog_16490	211.6	0	N/A	unknown function
eggNOG-mapper	UHGV-0159635_66	658655.HMPREF0988_00917	192.0	0	N/A	N/A
PHROG	UHGV-0159635_67	phrog_20016	179.4	0	N/A	unknown function
UniRef90	UHGV-0159635_67	UniRef90_A0A285PT46	169.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-0159635_67	1226322.HMPREF1545_00077	153.0	0	N/A	N/A
structural_annotation	UHGV-0159635_67	PF18573,NF033147	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0159635	Yes	39,321	57	98	1
UHGV-0141245	No	35,984	58	90	1
UHGV-2036439	No	33,864	58	84	1
UHGV-0065171	No	29,775	57	74	1
UHGV-1538254	No	29,372	57	73	1
UHGV-1423915	No	21,780	56	54	1
UHGV-1703635	No	18,905	56	47	1
UHGV-1654583	No	17,130	56	43	1
UHGV-2155241	No	16,633	57	41	1
UHGV-1576905	No	16,136	56	40	1