vOTU vOTU-078016

vOTU: vOTU-078016

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-078016
Number of genomes	2
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → CAG-194 → CAG-194 sp000432915
Taxonomy (UHGV)	vFAM-00062 → vSUBFAM-03606 → vGENUS-10545 → vSUBGEN-13945 → vOTU-078016
Host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae
Host range breadth	Family
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1525194
Biosample ID	SAMEA1965112
Genome length (bp)	39,425 bps
CheckV completeness	93.84% (High-quality)
CDS count	55
CDS density	88.14%
tRNA count	1
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae	Total connections	75	Host agreement	100
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → CAG-194 → CAG-194 sp000432915	Total connections	28	Host agreement	96.43

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 93.84)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1525194_1	phrog_2649	47.8	0.000000000000023	endolysin	lysis
UniRef90	UHGV-1525194_1	UniRef90_R6C8U0	258.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-1525194_1	742733.HMPREF9469_02856	101.0	2.74e-23	COG COG0791 Cell wall-associated hydrolases (invasion-associated proteins)	N/A
Pfam	UHGV-1525194_1	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
COG	UHGV-1525194_1	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
PHROG	UHGV-1525194_2	phrog_199	72.9	4e-21	holin	lysis
UniRef90	UHGV-1525194_2	UniRef90_A0A2H4JCP5	169.0	0	Putative lysis protein	N/A
eggNOG-mapper	UHGV-1525194_2	1235800.C819_02219	161.0	0	Bacteriophage holin family	N/A
Pfam	UHGV-1525194_2	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-1525194_2	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
COG	UHGV-1525194_2	COG4824	N/A	N/A	Phage-related holin (Lysis protein)	N/A
structural_annotation	UHGV-1525194_2	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
PHROG	UHGV-1525194_4	phrog_6616	115.7	3.5e-34	tail protein	tail
eggNOG-mapper	UHGV-1525194_4	1499683.CCFF01000014_gene3896	139.0	1.46e-30	Phage minor structural protein	N/A
Pfam	UHGV-1525194_4	PF13884	N/A	N/A	Chaperone of endosialidase	Peptidase_S74
COG	UHGV-1525194_4	COG4926	N/A	N/A	Phage-related protein	N/A
eggNOG-mapper	UHGV-1525194_5	1232453.BAIF02000058_gene1640	61.6	0.0000000000881	N/A	N/A
structural_annotation	UHGV-1525194_5	PF07761	N/A	N/A	N/A	N/A
PHROG	UHGV-1525194_6	phrog_1194	76.0	4.5e-22	N/A	unknown function
eggNOG-mapper	UHGV-1525194_6	1232453.BAIF02000058_gene1638	75.5	5.05e-16	N/A	N/A
Pfam	UHGV-1525194_6	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-1525194_6	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1525194_7	phrog_1535	208.4	0	tail length tape measure protein	tail
eggNOG-mapper	UHGV-1525194_7	469596.HMPREF9488_01316	90.5	0.00000000000000154	N/A	N/A
PHROG	UHGV-1525194_8	phrog_706	122.6	3.1e-36	N/A	unknown function
UniRef90	UHGV-1525194_8	UniRef90_A0A1I0K8S4	174.0	0	Bacteriophage Gp15 protein	N/A
eggNOG-mapper	UHGV-1525194_8	411902.CLOBOL_00127	167.0	0	N/A	N/A
Pfam	UHGV-1525194_8	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-1525194_8	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-1525194_9	phrog_11299	74.7	1.4e-21	N/A	unknown function
structural_annotation	UHGV-1525194_9	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-1525194_10	phrog_3099	62.4	9.3e-18	N/A	unknown function
eggNOG-mapper	UHGV-1525194_10	33035.JPJF01000106_gene3126	90.1	3.22e-21	N/A	N/A
structural_annotation	UHGV-1525194_10	PF08813,TIGR02126,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-1525194_11	phrog_3266	98.0	7.3e-29	tail completion	connector
eggNOG-mapper	UHGV-1525194_11	1151292.QEW_4531	53.1	0.000000706	N/A	N/A
structural_annotation	UHGV-1525194_11	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-1525194_12	phrog_3366	102.9	2.6e-30	N/A	unknown function
eggNOG-mapper	UHGV-1525194_12	411462.DORLON_00784	60.8	0.000000000664	N/A	N/A
Pfam	UHGV-1525194_12	PF20536	N/A	N/A	N/A	DUF6751
structural_annotation	UHGV-1525194_12	PF20536,TIGR02126	N/A	N/A	N/A	N/A
PHROG	UHGV-1525194_13	phrog_541	69.8	4e-20	head-tail adaptor	connector
PHROG	UHGV-1525194_15	phrog_422	185.8	0	major head protein	head and packaging
UniRef90	UHGV-1525194_15	UniRef90_A0A345MKD0	235.0	0	Main capsid protein	N/A
eggNOG-mapper	UHGV-1525194_15	471855.Shel_14060	243.0	0	N/A	N/A
structural_annotation	UHGV-1525194_15	PF21703,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
PHROG	UHGV-1525194_16	phrog_194	83.4	3.6e-24	head scaffolding protein	head and packaging
UniRef90	UHGV-1525194_16	UniRef90_A0A173RNU4	231.0	0	Phage minor structural protein GP20	N/A
eggNOG-mapper	UHGV-1525194_16	742765.HMPREF9457_02126	126.0	5.3e-34	COG NOG36366 non supervised orthologous group	N/A
Pfam	UHGV-1525194_16	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-1525194_16	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-1525194_18	phrog_3675	112.6	1.5e-33	N/A	unknown function
UniRef90	UHGV-1525194_18	UniRef90_UPI001C02868E	134.0	8.78e-39	YjcQ family protein	N/A
eggNOG-mapper	UHGV-1525194_18	1235799.C818_04221	133.0	2.79e-39	YjcQ protein	N/A
Pfam	UHGV-1525194_18	PF09639	N/A	N/A	YjcQ protein	YjcQ
structural_annotation	UHGV-1525194_18	PF09639,TIGR04176,COG2345	N/A	N/A	N/A	N/A
PHROG	UHGV-1525194_20	phrog_581	253.3	0	minor head protein	head and packaging
UniRef90	UHGV-1525194_20	UniRef90_UPI00164C8416	298.0	0	polymorphic toxin type 50 domain-containing protein	N/A
eggNOG-mapper	UHGV-1525194_20	903814.ELI_3213	169.0	2.99878e-43	Phage minor capsid protein 2	N/A
Pfam	UHGV-1525194_20	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-1525194_20	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1525194_20	PF06152,PF15542,TIGR01641	N/A	N/A	N/A	N/A
PHROG	UHGV-1525194_21	phrog_533	245.6	0	portal protein	head and packaging
UniRef90	UHGV-1525194_21	UniRef90_A0A3E3HWH0	587.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-1525194_21	645991.Sgly_0336	138.0	3.63e-33	N/A	N/A
structural_annotation	UHGV-1525194_21	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-1525194_22	K06909	116.5	3e-34	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1525194_22	phrog_2	148.9	5.46506e-44	terminase large subunit	head and packaging
UniRef90	UHGV-1525194_22	UniRef90_A0A350VVC2	668.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1525194_22	1120998.AUFC01000030_gene2231	365.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-1525194_22	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
NCBIFam	UHGV-1525194_22	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-1525194_22	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1525194_22	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
KOfam	UHGV-1525194_23	K07474	96.8	4.3e-28	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-1525194_23	phrog_2606	295.3	0	terminase small subunit	head and packaging
UniRef90	UHGV-1525194_23	UniRef90_UPI0015702ED4	338.0	0	terminase small subunit	N/A
eggNOG-mapper	UHGV-1525194_23	1304866.K413DRAFT_3033	193.0	0	terminase, small subunit	N/A
Pfam	UHGV-1525194_23	PF06056	N/A	N/A	Putative ATPase subunit of terminase (gpP-like)	Terminase_5
Pfam	UHGV-1525194_23	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-1525194_23	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-1525194_23	PF03592,PF10668,NF040601,COG3728	N/A	N/A	N/A	N/A
PHROG	UHGV-1525194_27	phrog_478	121.2	4.8e-36	site-specific recombination directionality factor RDF	integration and excision
UniRef90	UHGV-1525194_27	UniRef90_A0A373Q857	117.0	7.9e-31	YopX domain-containing protein	N/A
eggNOG-mapper	UHGV-1525194_27	1111121.HMPREF1247_0834	95.5	1.7e-23	N/A	N/A
KOfam	UHGV-1525194_28	K00558	228.4	0	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-1525194_28	phrog_116	266.4	0	DNA methyltransferase	other
UniRef90	UHGV-1525194_28	UniRef90_A0A3R5ZDV7	887.0	0	DNA (cytosine-5-)-methyltransferase	N/A
eggNOG-mapper	UHGV-1525194_28	1235800.C819_02255	670.0	0	C-5 cytosine-specific DNA methylase	N/A
PADLOC	UHGV-1525194_28	MTase_II_00020	114.5	9.2e-38	Type II methyltransferase	RM
Pfam	UHGV-1525194_28	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
COG	UHGV-1525194_28	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-1525194_28	PF00145,MF_00351,TIGR00675,COG0270	N/A	N/A	N/A	N/A
KOfam	UHGV-1525194_29	K06223	199.3	0	dam; DNA adenine methylase [EC:2.1.1.72]	N/A
PHROG	UHGV-1525194_29	phrog_56	146.4	2.49431e-43	DNA methyltransferase	other
UniRef90	UHGV-1525194_29	UniRef90_UPI001C01F42B	498.0	0	DNA adenine methylase	N/A
eggNOG-mapper	UHGV-1525194_29	411468.CLOSCI_00302	337.0	0	D12 class N6 adenine-specific DNA methyltransferase	N/A
PADLOC	UHGV-1525194_29	MTase_II_00030	255.2	0	Type II methyltransferase	RM
Pfam	UHGV-1525194_29	PF02086	N/A	N/A	D12 class N6 adenine-specific DNA methyltransferase	MethyltransfD12
COG	UHGV-1525194_29	COG0338	N/A	N/A	DNA-adenine methylase	N/A
structural_annotation	UHGV-1525194_29	PF02086,MF_01872,NF008152,COG0338	N/A	N/A	N/A	N/A
PHROG	UHGV-1525194_30	phrog_424	97.9	1e-28	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1525194_30	UniRef90_A0A2H4JC51	561.0	0	Putative 3'-phosphoadenosine 5'-phosphosulfatesulfotransferase/FAD synthetase-related enzyme	N/A
eggNOG-mapper	UHGV-1525194_30	411461.DORFOR_01142	569.0	0	N/A	N/A
COG	UHGV-1525194_30	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-1525194_30	PF01507,MF_00063,TIGR00434,COG0175	N/A	N/A	N/A	N/A
PHROG	UHGV-1525194_32	phrog_874	182.0	0	N/A	unknown function
UniRef90	UHGV-1525194_32	UniRef90_A0A4P6LRJ9	195.0	0	ASCH domain-containing protein	N/A
eggNOG-mapper	UHGV-1525194_32	411468.CLOSCI_00298	191.0	0	N/A	N/A
structural_annotation	UHGV-1525194_32	PF04266,MF_00684,NF003443,COG4405	N/A	N/A	N/A	N/A
PHROG	UHGV-1525194_33	phrog_1571	68.4	1.4e-30	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1525194_33	UniRef90_A0A1Q9J7B4	190.0	0	HNHc domain-containing protein	N/A
eggNOG-mapper	UHGV-1525194_33	702438.HMPREF9431_00759	132.0	7.11e-39	HNH endonuclease	N/A
COG	UHGV-1525194_33	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-1525194_33	NF008448	N/A	N/A	N/A	N/A
PHROG	UHGV-1525194_34	phrog_2118	100.1	2.5e-29	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1525194_34	UniRef90_A0A352SFW0	246.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-1525194_34	1235799.C818_02668	166.0	0	endonuclease activity	N/A
Pfam	UHGV-1525194_34	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-1525194_34	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-1525194_34	TIGR02646,COG1403	N/A	N/A	N/A	N/A
PHROG	UHGV-1525194_35	phrog_20593	88.4	5.5e-26	N/A	unknown function
eggNOG-mapper	UHGV-1525194_36	397290.C810_01514	65.5	0.00000000000721	N/A	N/A
PHROG	UHGV-1525194_37	phrog_244	86.0	5.7e-25	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1525194_37	1304866.K413DRAFT_1199	111.0	7.96e-30	N/A	N/A
structural_annotation	UHGV-1525194_37	PF01870,MF_01490,COG1591	N/A	N/A	N/A	N/A
PHROG	UHGV-1525194_38	phrog_16304	167.5	0	N/A	unknown function
UniRef90	UHGV-1525194_38	UniRef90_A0A3R6H2J6	261.0	0	N/A	N/A
eggNOG-mapper	UHGV-1525194_38	411490.ANACAC_00800	140.0	7.55e-38	N/A	N/A
Pfam	UHGV-1525194_38	PF19808	N/A	N/A	N/A	DUF6291
structural_annotation	UHGV-1525194_38	PF19808	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1525194_39	PF21715,COG1654	N/A	N/A	N/A	N/A
KOfam	UHGV-1525194_40	K07455	179.2	0	recT; recombination protein RecT	N/A
PHROG	UHGV-1525194_40	phrog_148	191.2	0	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1525194_40	UniRef90_A0A7C6P2G6	336.0	0	Recombinase	N/A
eggNOG-mapper	UHGV-1525194_40	742765.HMPREF9457_02107	304.0	0	RecT family	N/A
Pfam	UHGV-1525194_40	PF03837	N/A	N/A	RecT family	RecT
NCBIFam	UHGV-1525194_40	TIGR00616.1	N/A	N/A	recombinase, phage RecT family	N/A
COG	UHGV-1525194_40	COG3723	N/A	N/A	Recombinational DNA repair protein RecT	N/A
structural_annotation	UHGV-1525194_40	PF03837,TIGR00616,COG3723	N/A	N/A	N/A	N/A
PHROG	UHGV-1525194_43	phrog_674	169.4	0	N/A	unknown function
UniRef90	UHGV-1525194_43	UniRef90_A0A844E1E5	271.0	0	N/A	N/A
eggNOG-mapper	UHGV-1525194_43	1095750.HMPREF9970_1676	135.0	1.3e-35	N/A	N/A
Pfam	UHGV-1525194_43	PF07083	N/A	N/A	N/A	DUF1351
structural_annotation	UHGV-1525194_43	PF07083	N/A	N/A	N/A	N/A
PHROG	UHGV-1525194_44	phrog_434	158.4	0	RecE-like recombination exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1525194_44	UniRef90_A0A1C5PRT3	357.0	0	Putative phage-type endonuclease	N/A
eggNOG-mapper	UHGV-1525194_44	1095750.HMPREF9970_1677	313.0	0	YqaJ viral recombinase family	N/A
Pfam	UHGV-1525194_44	PF09588	N/A	N/A	YqaJ-like viral recombinase domain	YqaJ
NCBIFam	UHGV-1525194_44	TIGR03033.1	N/A	N/A	putative phage-type endonuclease	N/A
COG	UHGV-1525194_44	COG5377	N/A	N/A	Phage-related protein, predicted endonuclease	N/A
structural_annotation	UHGV-1525194_44	PF09588,MF_03030,TIGR03033,COG5377	N/A	N/A	N/A	N/A
PHROG	UHGV-1525194_48	phrog_3292	55.5	0.000000000000001	N/A	unknown function
UniRef90	UHGV-1525194_48	UniRef90_UPI0012F79817	110.0	2.35e-30	KTSC domain-containing protein	N/A
eggNOG-mapper	UHGV-1525194_48	1408823.AXUS01000024_gene2707	87.4	3.85e-22	KTSC domain	N/A
Pfam	UHGV-1525194_48	PF13619	N/A	N/A	KTSC domain	KTSC
COG	UHGV-1525194_48	COG4249	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1525194_48	PF13619	N/A	N/A	N/A	N/A
KOfam	UHGV-1525194_51	K22299	48.5	0.0000000000002	rghR; HTH-type transcriptional regulator, competence development regulator	N/A
PHROG	UHGV-1525194_51	phrog_8	47.6	0.00000000000035	transcriptional regulator	transcription regulation
UniRef90	UHGV-1525194_51	UniRef90_A0A173S886	163.0	0	Transcriptional repressor DicA	N/A
eggNOG-mapper	UHGV-1525194_51	483218.BACPEC_01181	122.0	2.25e-33	Peptidase S24-like	N/A
Pfam	UHGV-1525194_51	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1525194_51	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
structural_annotation	UHGV-1525194_51	PF12844,NF041951,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-1525194_52	phrog_87	96.5	2e-28	metallo-protease	other
UniRef90	UHGV-1525194_52	UniRef90_A0A3R6K8Y6	176.0	0	Peptidase_M78 domain-containing protein	N/A
eggNOG-mapper	UHGV-1525194_52	1347392.CCEZ01000005_gene1204	173.0	0	Zn peptidase	N/A
Pfam	UHGV-1525194_52	PF06114	N/A	N/A	IrrE N-terminal-like domain	Peptidase_M78
COG	UHGV-1525194_52	COG2856	N/A	N/A	Zn-dependent peptidase ImmA, M78 family	N/A
structural_annotation	UHGV-1525194_52	PF06114,COG2856	N/A	N/A	N/A	N/A
UniRef90	UHGV-1525194_53	UniRef90_A0A1C5WB15	110.0	5.75e-24	SAP domain	N/A
KOfam	UHGV-1525194_55	K14059	78.7	7.3e-23	int; integrase	N/A
PHROG	UHGV-1525194_55	phrog_1	103.5	2.9e-30	integrase	integration and excision
UniRef90	UHGV-1525194_55	UniRef90_R9J0C8	461.0	0	Tyr recombinase domain-containing protein	N/A
eggNOG-mapper	UHGV-1525194_55	397288.C806_00112	461.0	0	Belongs to the 'phage' integrase family	N/A
COG	UHGV-1525194_55	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1525194_55	PF00589,PF13495,MF_02055,TIGR02225,COG4974	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1525194	Yes	39,425	42	94	1
UHGV-0052440	No	38,700	42	92	1