vOTU vOTU-078123

vOTU: vOTU-078123

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-078123
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00005 → vSUBFAM-00474 → vGENUS-03781 → vSUBGEN-12644 → vOTU-078123
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → F23-B02 → F23-B02 sp002472405
Host range breadth	Species
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1497637
Biosample ID	SAMEA3665099
Genome length (bp)	42,831 bps
CheckV completeness	99.05% (High-quality)
CDS count	65
CDS density	93.19%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → F23-B02 → F23-B02 sp002472405	Total connections	25	Host agreement	72
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → F23-B02 → F23-B02 sp002472405	Total connections	1	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 99.05)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1497637_2	phrog_270	103.7	2.3e-30	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1497637_2	UniRef90_UPI00164BB1D1	139.0	2.12e-36	transcriptional regulator	N/A
eggNOG-mapper	UHGV-1497637_2	742740.HMPREF9474_03117	160.0	4.2039e-45	N/A	N/A
structural_annotation	UHGV-1497637_2	PF01475,NF006999,COG0735	N/A	N/A	N/A	N/A
KOfam	UHGV-1497637_3	K03111	119.3	5.2e-35	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1497637_3	phrog_44	121.1	9.7e-36	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1497637_3	UniRef90_R6IDK3	138.0	1.82e-39	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1497637_3	877414.ATWA01000008_gene232	123.0	5.18e-34	Single-strand binding protein family	N/A
Pfam	UHGV-1497637_3	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1497637_3	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1497637_3	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1497637_3	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1497637_3	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-1497637_4	phrog_7566	87.1	1.2e-25	N/A	unknown function
eggNOG-mapper	UHGV-1497637_4	508419.F8J187_9CAUD	107.0	3.96e-29	N/A	N/A
PHROG	UHGV-1497637_5	phrog_72	56.0	5.9e-16	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1497637_5	UniRef90_A0A8D9PDS2	135.0	2.41e-37	NinB protein	N/A
eggNOG-mapper	UHGV-1497637_5	445972.ANACOL_01825	118.0	3.18e-31	N/A	N/A
structural_annotation	UHGV-1497637_5	PF05772	N/A	N/A	N/A	N/A
PHROG	UHGV-1497637_6	phrog_7838	127.6	1.1e-37	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1497637_6	UniRef90_A0A8D9UGW3	184.0	0	DNA repair protein RAD52-like protein	N/A
eggNOG-mapper	UHGV-1497637_6	742767.HMPREF9456_02052	160.0	0	N/A	N/A
structural_annotation	UHGV-1497637_6	PF04098,TIGR00607,COG4380	N/A	N/A	N/A	N/A
PHROG	UHGV-1497637_7	phrog_253	91.2	1.2e-26	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1497637_7	UniRef90_UPI00082E9619	87.8	4.91e-19	siphovirus Gp157 family protein	N/A
Pfam	UHGV-1497637_7	PF05565	N/A	N/A	Siphovirus Gp157	Sipho_Gp157
structural_annotation	UHGV-1497637_7	PF05565	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1497637_9	PF21291,TIGR03070,COG3655	N/A	N/A	N/A	N/A
UniRef90	UHGV-1497637_11	UniRef90_A0A1C7FQD9	79.7	3.82e-18	Transcriptional regulator	N/A
Pfam	UHGV-1497637_11	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-1497637_11	PF13560,NF041951,COG1396	N/A	N/A	N/A	N/A
Pfam	UHGV-1497637_12	PF01047	N/A	N/A	MarR family	MarR
KOfam	UHGV-1497637_15	K22300	53.0	0.0000000000000071	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-1497637_15	phrog_8	42.5	0.000000000013	transcriptional regulator	transcription regulation
UniRef90	UHGV-1497637_15	UniRef90_A0A810PZI0	70.5	0.0000000000000084	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-1497637_15	693746.OBV_25500	62.0	0.00000000000334	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-1497637_15	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1497637_15	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-1497637_15	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-1497637_16	phrog_8	45.8	0.0000000000012	transcriptional regulator	transcription regulation
UniRef90	UHGV-1497637_16	UniRef90_UPI001896E330	82.4	1.45e-17	helix-turn-helix domain-containing protein	N/A
Pfam	UHGV-1497637_16	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
UniRef90	UHGV-1497637_20	UniRef90_A0A8D9UHA6	73.2	0.00000000000109	Helix-turn-helix XRE-family like protein	N/A
eggNOG-mapper	UHGV-1497637_20	1382304.JNIL01000001_gene3508	50.1	0.00000758	Helix-turn-helix XRE-family like proteins	N/A
COG	UHGV-1497637_20	COG3620	N/A	N/A	Predicted transcriptional regulator, contains an XRE-type HTH domain (archaeal members contain CBS pair)	N/A
structural_annotation	UHGV-1497637_20	PF13443,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A
KOfam	UHGV-1497637_21	K14059	107.0	2.5e-31	int; integrase	N/A
PHROG	UHGV-1497637_21	phrog_1	132.6	3.5e-39	integrase	integration and excision
UniRef90	UHGV-1497637_21	UniRef90_R6I1Y0	409.0	0	Site-specific recombinase XerD	N/A
eggNOG-mapper	UHGV-1497637_21	246199.CUS_5913	116.0	1.24e-26	Phage integrase family	N/A
COG	UHGV-1497637_21	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1497637_21	PF00589,PF12167,MF_02055,NF040815,COG4974	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1497637_22	PF12510	N/A	N/A	N/A	N/A
PHROG	UHGV-1497637_23	phrog_20016	189.6	0	N/A	unknown function
UniRef90	UHGV-1497637_23	UniRef90_A0A285PT46	199.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-1497637_23	1226322.HMPREF1545_00077	166.0	0	N/A	N/A
structural_annotation	UHGV-1497637_23	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-1497637_25	phrog_16490	141.9	5.79997e-42	N/A	unknown function
eggNOG-mapper	UHGV-1497637_25	1408437.JNJN01000043_gene803	149.0	9.37048e-42	N/A	N/A
PHROG	UHGV-1497637_26	phrog_22984	76.9	2.1e-22	N/A	unknown function
PHROG	UHGV-1497637_27	phrog_21718	98.7	4.2e-29	N/A	unknown function
eggNOG-mapper	UHGV-1497637_27	397290.C810_05210	94.7	7.16e-23	N/A	N/A
PHROG	UHGV-1497637_28	phrog_3754	106.0	3.1e-31	N/A	unknown function
eggNOG-mapper	UHGV-1497637_28	476272.RUMHYD_01764	151.0	1.4013e-45	N/A	N/A
structural_annotation	UHGV-1497637_29	PF16509,MF_00245,NF001066,COG2739	N/A	N/A	N/A	N/A
PHROG	UHGV-1497637_30	phrog_10091	110.9	8.2e-33	holin	lysis
UniRef90	UHGV-1497637_30	UniRef90_A0A1Y4RHF4	133.0	6.45e-39	Phage holin	N/A
eggNOG-mapper	UHGV-1497637_30	445975.COLSTE_02144	114.0	2.25e-32	Bacteriophage holin	N/A
Pfam	UHGV-1497637_30	PF04531	N/A	N/A	Bacteriophage holin	Phage_holin_1
NCBIFam	UHGV-1497637_30	TIGR01598.1	N/A	N/A	phage holin	N/A
COG	UHGV-1497637_30	COG5546	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1497637_30	COG5546	N/A	N/A	N/A	N/A
PHROG	UHGV-1497637_31	phrog_1863	66.8	1.9e-19	N/A	unknown function
eggNOG-mapper	UHGV-1497637_31	748224.HMPREF9436_01412	93.2	4.35e-24	N/A	N/A
PHROG	UHGV-1497637_32	phrog_21357	54.3	0.0000000000000014	endolysin	lysis
UniRef90	UHGV-1497637_32	UniRef90_UPI001BB47323	89.0	6.53e-18	CHAP domain-containing protein	N/A
eggNOG-mapper	UHGV-1497637_32	693746.OBV_22650	75.5	0.000000000000129	CHAP domain	N/A
Pfam	UHGV-1497637_32	PF05257	N/A	N/A	CHAP domain	CHAP
COG	UHGV-1497637_32	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
structural_annotation	UHGV-1497637_32	TIGR02594,COG3738	N/A	N/A	N/A	N/A
UniRef90	UHGV-1497637_33	UniRef90_R6I1X1	188.0	0	COPII coat assembly protein SEC16 (Protein transport protein SEC16)	N/A
eggNOG-mapper	UHGV-1497637_33	552398.HMPREF0866_01159	104.0	1.52e-26	N/A	N/A
PHROG	UHGV-1497637_35	phrog_37900	233.2	0	N/A	unknown function
UniRef90	UHGV-1497637_35	UniRef90_UPI00110725F0	376.0	0	N/A	N/A
eggNOG-mapper	UHGV-1497637_35	552398.HMPREF0866_03098	206.0	0	N/A	N/A
Pfam	UHGV-1497637_35	PF07523	N/A	N/A	Bacterial Ig-like domain (group 3)	Big_3
Pfam	UHGV-1497637_35	PF19789	N/A	N/A	N/A	DUF6273
COG	UHGV-1497637_35	COG3827	N/A	N/A	Cell pole-organizing protein PopZ	N/A
structural_annotation	UHGV-1497637_35	PF19190,MF_04116,NF010681,COG3291	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1497637_36	1007096.BAGW01000031_gene143	62.8	0.0000000355	cellulose 1,4-beta-cellobiosidase activity	N/A
COG	UHGV-1497637_36	COG5301	N/A	N/A	Phage-related tail fiber protein	N/A
eggNOG-mapper	UHGV-1497637_37	693746.OBV_01590	481.0	0	N/A	N/A
Pfam	UHGV-1497637_37	PF18760	N/A	N/A	ADP-Ribosyltransferase in polyvalent proteins	ART-PolyVal
UniRef90	UHGV-1497637_38	UniRef90_R5DCX9	110.0	1.34e-23	PG_binding_1 domain-containing protein	N/A
eggNOG-mapper	UHGV-1497637_38	1410650.JHWL01000003_gene2815	116.0	5.32e-26	N/A	N/A
PHROG	UHGV-1497637_39	phrog_24267	87.3	1.8e-25	N/A	unknown function
UniRef90	UHGV-1497637_39	UniRef90_A2HGS9	66.2	0.00000000152	Tail fiber protein, putative	N/A
eggNOG-mapper	UHGV-1497637_39	1042156.CXIVA_07170	105.0	6.22e-23	tail collar domain protein	N/A
COG	UHGV-1497637_39	COG4675	N/A	N/A	Phage tail collar domain	N/A
structural_annotation	UHGV-1497637_39	COG4675	N/A	N/A	N/A	N/A
PHROG	UHGV-1497637_40	phrog_511	229.8	0	internal virion protein	head and packaging
eggNOG-mapper	UHGV-1497637_40	1519439.JPJG01000060_gene1903	248.0	0	N/A	N/A
structural_annotation	UHGV-1497637_40	PF11134,TIGR03300,NF038126,COG1520	N/A	N/A	N/A	N/A
PHROG	UHGV-1497637_41	phrog_12105	97.8	8.4e-29	N/A	unknown function
eggNOG-mapper	UHGV-1497637_41	1519439.JPJG01000060_gene1891	63.2	0.0000000000468	N/A	N/A
PHROG	UHGV-1497637_43	phrog_1357	201.0	0	major head protein	head and packaging
UniRef90	UHGV-1497637_43	UniRef90_A0A2V2CFL5	535.0	0	N4-gp56 family major capsid protein	N/A
eggNOG-mapper	UHGV-1497637_43	1410650.JHWL01000003_gene2830	262.0	0	N/A	N/A
NCBIFam	UHGV-1497637_43	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-1497637_43	PF13252,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1497637_44	phrog_13908	168.3	0	N/A	unknown function
eggNOG-mapper	UHGV-1497637_44	1410650.JHWL01000003_gene2831	82.8	0.00000000000000424	N/A	N/A
KOfam	UHGV-1497637_45	K07584	62.6	7.7e-18	N/A	N/A
PHROG	UHGV-1497637_45	phrog_4478	74.9	7.6e-22	peptidase	other
UniRef90	UHGV-1497637_45	UniRef90_A0A6N9P4C8	58.2	0.00000000743	Ribosomal-processing cysteine protease Prp	N/A
Pfam	UHGV-1497637_45	PF04327	N/A	N/A	Cysteine protease Prp	Peptidase_Prp
COG	UHGV-1497637_45	COG2868	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1497637_45	PF04327,NF011124,COG2868	N/A	N/A	N/A	N/A
PHROG	UHGV-1497637_46	phrog_156	274.2	0	portal protein	head and packaging
eggNOG-mapper	UHGV-1497637_46	1410650.JHWL01000003_gene2833	500.0	0	N/A	N/A
structural_annotation	UHGV-1497637_46	PF16510,MF_04120,TIGR01538,COG5518	N/A	N/A	N/A	N/A
KOfam	UHGV-1497637_47	K06909	145.9	2.99878e-43	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1497637_47	phrog_979	159.4	0	terminase large subunit	head and packaging
UniRef90	UHGV-1497637_47	UniRef90_A0A3C0NMI6	637.0	0	Terminase-like family protein	N/A
eggNOG-mapper	UHGV-1497637_47	1410650.JHWL01000003_gene2834	559.0	0	N/A	N/A
Pfam	UHGV-1497637_47	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-1497637_47	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1497637_47	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1497637_50	phrog_4973	74.9	8.2e-22	N/A	unknown function
UniRef90	UHGV-1497637_50	UniRef90_UPI001D0904CC	85.1	3.31e-20	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1497637_50	935261.JAGL01000009_gene1175	48.9	0.000000872	Helix-turn-helix domain	N/A
Pfam	UHGV-1497637_50	PF14090	N/A	N/A	Helix-turn-helix domain	HTH_39
structural_annotation	UHGV-1497637_50	PF14090,MF_01586,TIGR00373,COG5625	N/A	N/A	N/A	N/A
Pfam	UHGV-1497637_52	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1497637_52	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1497637_52	PF13560,TIGR03070,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-1497637_53	phrog_10714	48.7	0.00000000000013	N/A	unknown function
structural_annotation	UHGV-1497637_53	PF15188	N/A	N/A	N/A	N/A
UniRef90	UHGV-1497637_57	UniRef90_A0A8D9PDK2	57.8	0.0000000151	Zinc-ribbon containing domain	N/A
PHROG	UHGV-1497637_59	phrog_38832	73.4	1.7e-21	N/A	unknown function
eggNOG-mapper	UHGV-1497637_59	665956.HMPREF1032_00143	59.7	0.0000000123	N/A	N/A
structural_annotation	UHGV-1497637_59	PF10781	N/A	N/A	N/A	N/A
PHROG	UHGV-1497637_61	phrog_1384	129.6	1.9e-38	Mom-like DNA modification protein	other
eggNOG-mapper	UHGV-1497637_61	428125.CLOLEP_01816	271.0	0	COG NOG12663 non supervised orthologous group	N/A
structural_annotation	UHGV-1497637_61	PF11124,MF_02210,NF040502,COG3818	N/A	N/A	N/A	N/A
Pfam	UHGV-1497637_62	PF04448	N/A	N/A	N/A	DUF551
PHROG	UHGV-1497637_63	phrog_954	195.3	0	DNA methyltransferase	other
UniRef90	UHGV-1497637_63	UniRef90_A0A810Q0N4	276.0	0	Methyltransferase	N/A
eggNOG-mapper	UHGV-1497637_63	1280698.AUJS01000007_gene1028	275.0	0	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA	N/A
PADLOC	UHGV-1497637_63	MTase_II_00074	203.7	0	Type II methyltransferase	RM
Pfam	UHGV-1497637_63	PF08241	N/A	N/A	Methyltransferase domain	Methyltransf_11
COG	UHGV-1497637_63	COG1092	N/A	N/A	23S rRNA G2069 N7-methylase RlmK or C1962 C5-methylase RlmI	N/A
structural_annotation	UHGV-1497637_63	PF05148,MF_03044,NF033398,COG1041	N/A	N/A	N/A	N/A
KOfam	UHGV-1497637_64	K01449	51.1	0.000000000000023	cwlJ, sleB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-1497637_64	phrog_30550	149.6	9.80909e-45	N/A	unknown function
UniRef90	UHGV-1497637_64	UniRef90_A0A6N9PX25	132.0	6.95e-36	Cell wall hydrolase	N/A
eggNOG-mapper	UHGV-1497637_64	1519439.JPJG01000077_gene920	117.0	1.65e-31	Cell Wall Hydrolase	N/A
Pfam	UHGV-1497637_64	PF07486	N/A	N/A	Cell Wall Hydrolase	Hydrolase_2
structural_annotation	UHGV-1497637_64	PF07486,TIGR02869,COG3773	N/A	N/A	N/A	N/A
dbAPIS	UHGV-1497637_65	APIS008	N/A	N/A	Alphafold2 predicted that Gad2 is an enzyme with a nucleotidyltransferase protein domain, suggesting that it inhibits Gabija via a mechanism of action different than Gad1.	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1497637	Yes	42,831	51	99	1