vOTU vOTU-078214

vOTU: vOTU-078214

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-078214
Number of genomes	5
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00003 → vSUBFAM-00087 → vGENUS-00253 → vSUBGEN-12162 → vOTU-078214
Host lineage	Bacteria → Firmicutes → Bacilli → Erysipelotrichales → Coprobacillaceae → Catenibacterium
Host range breadth	Genus
Lifestyle	lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0170720
Biosample ID	SAMN06165116
Genome length (bp)	34,678 bps
CheckV completeness	94.79% (High-quality)
CDS count	48
CDS density	91.93%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes → Bacilli → Erysipelotrichales → Coprobacillaceae → Catenibacterium	Total connections	168	Host agreement	94.64
PHIST-predicted host lineage	Bacteria → Firmicutes → Bacilli → Erysipelotrichales → Coprobacillaceae → Catenibacterium → Catenibacterium sp000437715	Total connections	121	Host agreement	76.03

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 94.79)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0170720_1	K07741	144.7	1.3999e-42	antB; anti-repressor protein	N/A
PHROG	UHGV-0170720_1	phrog_63	104.8	1.1e-30	anti-repressor Ant	transcription regulation
UniRef90	UHGV-0170720_1	UniRef90_UPI00067F3EAD	221.0	0	phage antirepressor KilAC domain-containing protein	N/A
eggNOG-mapper	UHGV-0170720_1	1499683.CCFF01000017_gene2614	185.0	0	Phage antirepressor protein	N/A
Pfam	UHGV-0170720_1	PF08346	N/A	N/A	AntA/AntB antirepressor	AntA
Pfam	UHGV-0170720_1	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
COG	UHGV-0170720_1	COG3561	N/A	N/A	Phage anti-repressor protein Ant	N/A
structural_annotation	UHGV-0170720_1	PF03374,PF08346,TIGR02681,COG3645,COG3561	N/A	N/A	N/A	N/A
UniRef90	UHGV-0170720_2	UniRef90_A0A415XFB8	94.7	1.03e-23	DNA-binding protein	N/A
structural_annotation	UHGV-0170720_2	PF12728,TIGR01764,COG3311	N/A	N/A	N/A	N/A
PHROG	UHGV-0170720_5	phrog_434	163.4	0	RecE-like recombination exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0170720_5	UniRef90_A0A6N9L4Y3	450.0	0	Recombinase	N/A
eggNOG-mapper	UHGV-0170720_5	888055.HMPREF9015_01894	130.0	6.2e-35	YqaJ viral recombinase family	N/A
Pfam	UHGV-0170720_5	PF09588	N/A	N/A	YqaJ-like viral recombinase domain	YqaJ
NCBIFam	UHGV-0170720_5	TIGR03033.1	N/A	N/A	putative phage-type endonuclease	N/A
COG	UHGV-0170720_5	COG5377	N/A	N/A	Phage-related protein, predicted endonuclease	N/A
structural_annotation	UHGV-0170720_5	PF09588,MF_03030,TIGR03033,COG5377	N/A	N/A	N/A	N/A
UniRef90	UHGV-0170720_6	UniRef90_A0A412KEL9	55.1	0.0000000144	XRE family transcriptional regulator	N/A
PHROG	UHGV-0170720_7	phrog_674	80.2	2.4e-23	N/A	unknown function
UniRef90	UHGV-0170720_7	UniRef90_A0A6N9L4W2	758.0	0	N/A	N/A
eggNOG-mapper	UHGV-0170720_7	1234679.BN424_3317	68.9	0.000000000544	N/A	N/A
Pfam	UHGV-0170720_7	PF07083	N/A	N/A	N/A	DUF1351
structural_annotation	UHGV-0170720_7	PF07083	N/A	N/A	N/A	N/A
KOfam	UHGV-0170720_8	K07455	209.2	0	recT; recombination protein RecT	N/A
PHROG	UHGV-0170720_8	phrog_148	223.9	0	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0170720_8	UniRef90_A0A6N9L4X4	620.0	0	Recombinase	N/A
eggNOG-mapper	UHGV-0170720_8	1095750.HMPREF9970_1675	367.0	0	RecT family	N/A
Pfam	UHGV-0170720_8	PF03837	N/A	N/A	RecT family	RecT
NCBIFam	UHGV-0170720_8	TIGR00616.1	N/A	N/A	recombinase, phage RecT family	N/A
COG	UHGV-0170720_8	COG3723	N/A	N/A	Recombinational DNA repair protein RecT	N/A
structural_annotation	UHGV-0170720_8	PF03837,TIGR00616,COG3723	N/A	N/A	N/A	N/A
PHROG	UHGV-0170720_9	phrog_2514	59.9	1.6e-17	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0170720_9	UniRef90_UPI001C395B09	232.0	0	winged helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-0170720_9	1147044.H9A0L9_9CAUD	63.2	0.00000000625	calcium ion binding	N/A
structural_annotation	UHGV-0170720_9	PF09681,NF033788,COG0640	N/A	N/A	N/A	N/A
PHROG	UHGV-0170720_13	phrog_22292	108.0	6.5e-32	N/A	unknown function
eggNOG-mapper	UHGV-0170720_13	1232446.BAIE02000002_gene811	57.0	0.0000000433	N/A	N/A
KOfam	UHGV-0170720_17	K03111	145.2	7.20267e-43	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0170720_17	phrog_44	152.2	2.8026e-45	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0170720_17	UniRef90_A0A6N9L4V1	251.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0170720_17	1232446.BAIE02000064_gene3707	161.0	0	Single-strand binding protein family	N/A
Pfam	UHGV-0170720_17	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0170720_17	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0170720_17	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0170720_17	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0170720_17	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0170720_18	phrog_190	121.7	5.5e-36	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0170720_18	UniRef90_A0A6N9L4W3	176.0	0	N/A	N/A
eggNOG-mapper	UHGV-0170720_18	1347392.CCEZ01000043_gene417	91.7	2.64e-22	N/A	N/A
Pfam	UHGV-0170720_18	PF06356	N/A	N/A	N/A	DUF1064
structural_annotation	UHGV-0170720_18	PF06356	N/A	N/A	N/A	N/A
PHROG	UHGV-0170720_21	phrog_36	56.3	7.4e-16	transcriptional regulator	transcription regulation
eggNOG-mapper	UHGV-0170720_21	411461.DORFOR_00754	51.2	0.0000027	sigma factor activity	N/A
COG	UHGV-0170720_21	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-0170720_21	PF08281,MF_00674,NF007227,COG1191	N/A	N/A	N/A	N/A
KOfam	UHGV-0170720_22	K07474	103.7	3.8e-30	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-0170720_22	phrog_51	121.2	8.5e-36	terminase small subunit	head and packaging
UniRef90	UHGV-0170720_22	UniRef90_A0A6N9L4V4	264.0	0	Terminase small subunit	N/A
eggNOG-mapper	UHGV-0170720_22	1504823.CCMM01000008_gene1049	195.0	0	DNA packaging	N/A
Pfam	UHGV-0170720_22	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-0170720_22	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0170720_22	PF03592,COG3728	N/A	N/A	N/A	N/A
KOfam	UHGV-0170720_23	K06909	371.4	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0170720_23	phrog_3717	169.8	0	terminase large subunit	head and packaging
UniRef90	UHGV-0170720_23	UniRef90_A0A6N9L4W9	862.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0170720_23	1504823.CCMM01000008_gene1048	773.0	0	DNA packaging	N/A
Pfam	UHGV-0170720_23	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-0170720_23	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-0170720_23	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0170720_23	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0170720_23	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0170720_24	phrog_64	390.5	0	portal protein	head and packaging
UniRef90	UHGV-0170720_24	UniRef90_A0A6N9L3D6	896.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0170720_24	445974.CLORAM_02935	479.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0170720_24	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
NCBIFam	UHGV-0170720_24	TIGR01538.1	N/A	N/A	phage portal protein	N/A
structural_annotation	UHGV-0170720_24	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
PHROG	UHGV-0170720_25	phrog_115	323.8	0	minor head protein	head and packaging
UniRef90	UHGV-0170720_25	UniRef90_A0A6N9L4X5	678.0	0	Phage_Mu_F domain-containing protein	N/A
eggNOG-mapper	UHGV-0170720_25	742733.HMPREF9469_01825	272.0	0	Phage head morphogenesis protein, SPP1 gp7 family	N/A
Pfam	UHGV-0170720_25	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
NCBIFam	UHGV-0170720_25	TIGR01641.1	N/A	N/A	minor capsid protein	N/A
COG	UHGV-0170720_25	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0170720_25	PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-0170720_27	phrog_3675	114.6	3.7e-34	N/A	unknown function
UniRef90	UHGV-0170720_27	UniRef90_A0A0E4H649	119.0	8.87e-33	YjcQ protein	N/A
eggNOG-mapper	UHGV-0170720_27	1120978.KB894082_gene1061	142.0	2.1594e-42	YjcQ protein	N/A
Pfam	UHGV-0170720_27	PF09639	N/A	N/A	YjcQ protein	YjcQ
structural_annotation	UHGV-0170720_27	PF09639,TIGR04176,COG1695	N/A	N/A	N/A	N/A
PHROG	UHGV-0170720_28	phrog_30609	66.3	5.2e-19	N/A	unknown function
structural_annotation	UHGV-0170720_28	PF21485	N/A	N/A	N/A	N/A
PHROG	UHGV-0170720_29	phrog_172	157.4	0	head scaffolding protein	head and packaging
UniRef90	UHGV-0170720_29	UniRef90_A0A6N9L4V5	305.0	0	N/A	N/A
eggNOG-mapper	UHGV-0170720_29	1211844.CBLM010000016_gene1492	107.0	1.77e-26	N/A	N/A
Pfam	UHGV-0170720_29	PF14265	N/A	N/A	N/A	DUF4355
structural_annotation	UHGV-0170720_29	PF14265	N/A	N/A	N/A	N/A
PHROG	UHGV-0170720_30	phrog_422	295.9	0	major head protein	head and packaging
UniRef90	UHGV-0170720_30	UniRef90_A0A2H4JCM6	301.0	0	Putative capsid protein	N/A
eggNOG-mapper	UHGV-0170720_30	1211844.CBLM010000016_gene1491	309.0	0	N/A	N/A
structural_annotation	UHGV-0170720_30	PF21703,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
PHROG	UHGV-0170720_31	phrog_2724	62.2	9.5e-18	N/A	unknown function
UniRef90	UHGV-0170720_31	UniRef90_A0A6N9L4P9	162.0	0	Rho_N domain-containing protein	N/A
Pfam	UHGV-0170720_31	PF07498	N/A	N/A	Rho termination factor, N-terminal domain	Rho_N
COG	UHGV-0170720_31	COG0261	N/A	N/A	Ribosomal protein L21	N/A
structural_annotation	UHGV-0170720_31	PF07498	N/A	N/A	N/A	N/A
PHROG	UHGV-0170720_32	phrog_132	42.1	0.000000000013	head-tail adaptor	connector
UniRef90	UHGV-0170720_32	UniRef90_UPI001C101B39	54.3	0.000000262	phage head-tail connector protein	N/A
eggNOG-mapper	UHGV-0170720_32	1235800.C819_00483	56.6	0.00000000811	Phage gp6-like head-tail connector protein	N/A
Pfam	UHGV-0170720_32	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
structural_annotation	UHGV-0170720_32	PF05135,TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-0170720_33	phrog_2168	89.3	3.3e-26	N/A	unknown function
eggNOG-mapper	UHGV-0170720_33	1280689.AUJC01000003_gene969	76.6	1.01e-16	N/A	N/A
structural_annotation	UHGV-0170720_33	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0170720_34	phrog_5	71.3	1.6e-20	tail completion or Neck1 protein	connector
UniRef90	UHGV-0170720_34	UniRef90_A0A6N9L3B6	344.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0170720_34	742733.HMPREF9469_01819	154.0	1.4013e-45	Bacteriophage HK97-gp10, putative tail-component	N/A
Pfam	UHGV-0170720_34	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
NCBIFam	UHGV-0170720_34	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
structural_annotation	UHGV-0170720_34	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-0170720_35	phrog_78	57.8	2.3e-16	tail terminator	connector
eggNOG-mapper	UHGV-0170720_35	1504823.CCMM01000008_gene1036	142.0	1.5106e-42	N/A	N/A
structural_annotation	UHGV-0170720_35	PF05657	N/A	N/A	N/A	N/A
PHROG	UHGV-0170720_36	phrog_158	72.7	7.2e-21	major tail protein	tail
UniRef90	UHGV-0170720_36	UniRef90_A0A6N9L2K6	272.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-0170720_36	445974.CLORAM_02924	174.0	0	Phage tail tube protein, TTP	N/A
Pfam	UHGV-0170720_36	PF08813	N/A	N/A	Phage tail tube protein, TTP	Phage_tail_3
structural_annotation	UHGV-0170720_36	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0170720_37	phrog_183	59.4	6.8e-17	tail chaperone protein	tail
UniRef90	UHGV-0170720_37	UniRef90_UPI0011C9B36A	221.0	0	N/A	N/A
eggNOG-mapper	UHGV-0170720_37	445974.CLORAM_02923	117.0	2.32e-32	N/A	N/A
Pfam	UHGV-0170720_37	PF19591	N/A	N/A	N/A	DUF6096
structural_annotation	UHGV-0170720_37	PF19591	N/A	N/A	N/A	N/A
PHROG	UHGV-0170720_38	phrog_1535	319.9	0	tail length tape measure protein	tail
UniRef90	UHGV-0170720_38	UniRef90_A0A6N9L4U2	1546.0	0	Tape measure protein	N/A
eggNOG-mapper	UHGV-0170720_38	650150.ERH_0621	342.0	0	tape measure	N/A
Pfam	UHGV-0170720_38	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-0170720_38	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-0170720_38	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
structural_annotation	UHGV-0170720_38	PF09325	N/A	N/A	N/A	N/A
PHROG	UHGV-0170720_39	phrog_1194	84.7	9.1e-25	N/A	unknown function
eggNOG-mapper	UHGV-0170720_39	1504823.CCMM01000008_gene1031	187.0	0	N/A	N/A
Pfam	UHGV-0170720_39	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-0170720_39	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0170720_40	phrog_15074	60.1	9.7e-18	N/A	unknown function
eggNOG-mapper	UHGV-0170720_40	445974.CLORAM_02919	490.0	0	cellulase activity	N/A
COG	UHGV-0170720_40	COG4733	N/A	N/A	Phage-related protein, tail protein J	N/A
structural_annotation	UHGV-0170720_40	PF14594,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-0170720_41	phrog_30133	114.3	1.1e-33	virion structural protein	head and packaging
UniRef90	UHGV-0170720_41	UniRef90_I7ARM6	294.0	0	N/A	N/A
eggNOG-mapper	UHGV-0170720_41	1504823.CCMM01000008_gene1029	313.0	0	N/A	N/A
structural_annotation	UHGV-0170720_41	PF14874,NF038186	N/A	N/A	N/A	N/A
PHROG	UHGV-0170720_42	phrog_18110	44.2	0.000000000002	N/A	unknown function
eggNOG-mapper	UHGV-0170720_42	411465.PEPMIC_00746	71.2	0.0000000000283	Prophage endopeptidase tail	N/A
COG	UHGV-0170720_42	COG4926	N/A	N/A	Phage-related protein	N/A
PHROG	UHGV-0170720_43	phrog_372	220.7	0	tail protein	tail
UniRef90	UHGV-0170720_43	UniRef90_UPI0006C32325	1081.0	0	N/A	N/A
eggNOG-mapper	UHGV-0170720_43	1211844.CBLM010000016_gene1479	201.0	0	N/A	N/A
Pfam	UHGV-0170720_43	PF05895	N/A	N/A	N/A	DUF859
structural_annotation	UHGV-0170720_43	PF05895,MF_04116,NF010681,COG3291	N/A	N/A	N/A	N/A
PHROG	UHGV-0170720_44	phrog_199	59.6	3.9e-17	holin	lysis
UniRef90	UHGV-0170720_44	UniRef90_E2NU60	293.0	0	Toxin secretion/phage lysis holin	N/A
eggNOG-mapper	UHGV-0170720_44	742723.HMPREF9477_00889	191.0	0	Bacteriophage holin family	N/A
Pfam	UHGV-0170720_44	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-0170720_44	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
COG	UHGV-0170720_44	COG4824	N/A	N/A	Phage-related holin (Lysis protein)	N/A
structural_annotation	UHGV-0170720_44	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
PHROG	UHGV-0170720_45	phrog_774	57.2	4e-16	N/A	unknown function
eggNOG-mapper	UHGV-0170720_45	397290.C810_05225	78.2	8.13e-18	N/A	N/A
KOfam	UHGV-0170720_46	K01448	119.9	2.6e-35	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0170720_46	phrog_435	183.6	0	endolysin	lysis
UniRef90	UHGV-0170720_46	UniRef90_UPI001EE924D3	430.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-0170720_46	552396.HMPREF0863_00263	194.0	0	hmm pf01520	N/A
Pfam	UHGV-0170720_46	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
COG	UHGV-0170720_46	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0170720_46	PF01520,PF18342,MF_00417,TIGR02883,COG0860,COG4991	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0170720_47	633147.Olsu_1237	53.9	0.0000000051	N/A	N/A
KOfam	UHGV-0170720_48	K12952	875.2	0	ctpE; cation-transporting P-type ATPase E [EC:7.2.2.-]	N/A
PHROG	UHGV-0170720_48	phrog_12316	327.3	0	ATPase	other
UniRef90	UHGV-0170720_48	UniRef90_E2NW86	1300.0	0	E1-E2 ATPase	N/A
eggNOG-mapper	UHGV-0170720_48	1410674.JNKU01000007_gene1343	826.0	0	E1-E2 ATPase	N/A
Pfam	UHGV-0170720_48	PF00122	N/A	N/A	E1-E2 ATPase	E1-E2_ATPase
Pfam	UHGV-0170720_48	PF00702	N/A	N/A	haloacid dehalogenase-like hydrolase	Hydrolase
NCBIFam	UHGV-0170720_48	TIGR01494.1	N/A	N/A	HAD-IC family P-type ATPase	N/A
COG	UHGV-0170720_48	COG0474	N/A	N/A	Magnesium-transporting ATPase (P-type)	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0170720	Yes	34,678	38	95	1
UHGV-1535014	No	31,497	38	86	1
UHGV-0342611	No	22,429	39	61	1
UHGV-1654828	No	17,055	39	47	1
UHGV-1696253	No	14,684	39	40	1