vOTU vOTU-078554

vOTU: vOTU-078554

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-078554
Number of genomes	9
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae → Clostridium_A → Clostridium_A leptum
Taxonomy (UHGV)	vFAM-00003 → vSUBFAM-02423 → vGENUS-02934 → vSUBGEN-20990 → vOTU-078554
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae → Clostridium_A → Clostridium_A leptum
Host range breadth	Species
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0169355
Biosample ID	N/A
Genome length (bp)	36,062 bps
CheckV completeness	99.90% (High-quality)
CDS count	67
CDS density	91.97%
tRNA count	1
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	PHIST
CRISPR-predicted host lineage		Total connections		Host agreement
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae → Clostridium_A → Clostridium_A leptum	Total connections	72	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 99.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0169355_1	K14059	207.0	0	int; integrase	N/A
PHROG	UHGV-0169355_1	phrog_1	190.3	0	integrase	integration and excision
UniRef90	UHGV-0169355_1	UniRef90_A0A1C6FNS1	792.0	0	Integrase	N/A
eggNOG-mapper	UHGV-0169355_1	428125.CLOLEP_01837	132.0	8.39e-32	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0169355_1	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0169355_1	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-0169355_1	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
PHROG	UHGV-0169355_3	phrog_297	56.0	7.2e-16	holin	lysis
UniRef90	UHGV-0169355_3	UniRef90_A7VT88	183.0	0	Holin, phage phi LC3 family	N/A
eggNOG-mapper	UHGV-0169355_3	428125.CLOLEP_00169	183.0	0	COG COG5546 Small integral membrane protein	N/A
Pfam	UHGV-0169355_3	PF04531	N/A	N/A	Bacteriophage holin	Phage_holin_1
NCBIFam	UHGV-0169355_3	TIGR01598.1	N/A	N/A	phage holin	N/A
COG	UHGV-0169355_3	COG5546	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0169355_3	COG5546	N/A	N/A	N/A	N/A
PHROG	UHGV-0169355_4	phrog_937	80.2	2.5e-23	hemolysin	other
eggNOG-mapper	UHGV-0169355_4	428125.CLOLEP_00170	223.0	0	N/A	N/A
KOfam	UHGV-0169355_5	K07273	223.1	0	acm; lysozyme	N/A
PHROG	UHGV-0169355_5	phrog_291	178.1	0	endolysin	lysis
UniRef90	UHGV-0169355_5	UniRef90_A0A1C5NS63	299.0	0	Autolytic lysozyme	N/A
eggNOG-mapper	UHGV-0169355_5	428125.CLOLEP_00561	324.0	0	Glycosyl hydrolases family 25	N/A
Pfam	UHGV-0169355_5	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-0169355_5	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-0169355_5	PF01183,TIGR04303,COG3757,COG5492	N/A	N/A	N/A	N/A
UniRef90	UHGV-0169355_6	UniRef90_R6NDD3	98.2	1.68e-25	Glycosyl hydrolase family 25	N/A
structural_annotation	UHGV-0169355_6	PF02796,COG2771	N/A	N/A	N/A	N/A
PHROG	UHGV-0169355_7	phrog_7121	268.4	0	tail fiber protein	tail
UniRef90	UHGV-0169355_7	UniRef90_A7VT91	793.0	0	Peptidase S74 domain-containing protein	N/A
eggNOG-mapper	UHGV-0169355_7	428125.CLOLEP_00172	803.0	0	COG COG5295 Autotransporter adhesin	N/A
Pfam	UHGV-0169355_7	PF13884	N/A	N/A	Chaperone of endosialidase	Peptidase_S74
PHROG	UHGV-0169355_8	phrog_18725	46.9	0.00000000000039	N/A	unknown function
eggNOG-mapper	UHGV-0169355_8	665956.HMPREF1032_02705	99.4	8.84e-25	N/A	N/A
PHROG	UHGV-0169355_9	phrog_13879	275.6	0	N/A	unknown function
eggNOG-mapper	UHGV-0169355_9	1304866.K413DRAFT_0774	58.2	0.00000994	N/A	N/A
structural_annotation	UHGV-0169355_9	PF03256,PF16466,PF13550,MF_00813,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-0169355_10	phrog_1194	58.9	8.2e-17	N/A	unknown function
eggNOG-mapper	UHGV-0169355_10	742740.HMPREF9474_03515	62.0	0.000000000148	N/A	N/A
Pfam	UHGV-0169355_10	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-0169355_10	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0169355_11	phrog_1535	138.6	0	tail length tape measure protein	tail
UniRef90	UHGV-0169355_11	UniRef90_A0A1C6HCQ7	897.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0169355_11	1122918.KB907248_gene4489	84.7	0.0000000000000852	minor tail protein	N/A
COG	UHGV-0169355_11	COG1511	N/A	N/A	N/A	N/A
PHROG	UHGV-0169355_12	phrog_8355	97.4	5.2e-29	N/A	unknown function
UniRef90	UHGV-0169355_12	UniRef90_UPI0018A7EA5D	136.0	5.28e-39	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-0169355_12	1507.HMPREF0262_01186	124.0	2.18e-35	N/A	N/A
Pfam	UHGV-0169355_12	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0169355_12	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0169355_13	phrog_8300	78.7	6e-23	N/A	unknown function
eggNOG-mapper	UHGV-0169355_13	1507.HMPREF0262_01185	87.4	7.03e-21	N/A	N/A
structural_annotation	UHGV-0169355_13	PF06896	N/A	N/A	N/A	N/A
PHROG	UHGV-0169355_14	phrog_820	147.3	5.04467e-44	major tail protein	tail
UniRef90	UHGV-0169355_14	UniRef90_UPI001C1178BB	204.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-0169355_14	1507.HMPREF0262_01184	225.0	0	domain, Protein	N/A
COG	UHGV-0169355_14	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0169355_14	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0169355_15	phrog_2595	72.1	7.3e-21	head-tail connector protein	connector
UniRef90	UHGV-0169355_15	UniRef90_UPI000A26871F	126.0	6.3e-35	minor capsid protein	N/A
eggNOG-mapper	UHGV-0169355_15	1507.HMPREF0262_01183	98.2	1.65e-24	N/A	N/A
structural_annotation	UHGV-0169355_15	PF12691,COG5003	N/A	N/A	N/A	N/A
PHROG	UHGV-0169355_16	phrog_556	47.1	0.00000000000038	minor head protein	head and packaging
eggNOG-mapper	UHGV-0169355_16	1507.HMPREF0262_01182	115.0	2.28e-31	N/A	N/A
PHROG	UHGV-0169355_17	phrog_8710	127.8	3.7e-38	N/A	unknown function
eggNOG-mapper	UHGV-0169355_17	1507.HMPREF0262_01181	129.0	1.48e-37	N/A	N/A
structural_annotation	UHGV-0169355_17	PF10665,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0169355_18	phrog_541	69.9	3.6e-20	head-tail adaptor	connector
eggNOG-mapper	UHGV-0169355_18	1507.HMPREF0262_01180	90.1	1.44e-21	N/A	N/A
UniRef90	UHGV-0169355_20	UniRef90_A0A644YJM4	327.0	0	S-l_SbsC_C domain-containing protein	N/A
structural_annotation	UHGV-0169355_20	PF11651,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0169355_21	phrog_2303	44.3	0.000000000000076	head scaffolding protein	head and packaging
PHROG	UHGV-0169355_24	phrog_581	281.0	0	minor head protein	head and packaging
UniRef90	UHGV-0169355_24	UniRef90_A0A1C6HBH6	1141.0	0	Phage minor capsid protein 2	N/A
eggNOG-mapper	UHGV-0169355_24	1507.HMPREF0262_01176	413.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-0169355_24	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0169355_24	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0169355_24	PF06152,TIGR01641	N/A	N/A	N/A	N/A
PHROG	UHGV-0169355_25	phrog_533	253.0	0	portal protein	head and packaging
UniRef90	UHGV-0169355_25	UniRef90_A0A1C6HAQ3	981.0	0	Phage portal protein, putative, A118 family	N/A
eggNOG-mapper	UHGV-0169355_25	1507.HMPREF0262_01175	461.0	0	N/A	N/A
structural_annotation	UHGV-0169355_25	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0169355_26	K06909	142.6	3.99931e-42	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0169355_26	phrog_10250	184.8	0	N/A	unknown function
UniRef90	UHGV-0169355_26	UniRef90_R6NBU9	810.0	0	Phage terminase large subunit PBSX family	N/A
eggNOG-mapper	UHGV-0169355_26	1226322.HMPREF1545_00043	475.0	0	Phage terminase large subunit	N/A
Pfam	UHGV-0169355_26	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
NCBIFam	UHGV-0169355_26	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0169355_26	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0169355_26	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
KOfam	UHGV-0169355_27	K07474	160.7	0	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-0169355_27	phrog_51	155.1	0	terminase small subunit	head and packaging
UniRef90	UHGV-0169355_27	UniRef90_R6N1B1	323.0	0	Phage Terminase Small Subunit	N/A
eggNOG-mapper	UHGV-0169355_27	1499683.CCFF01000014_gene3916	157.0	0	Terminase small subunit	N/A
Pfam	UHGV-0169355_27	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-0169355_27	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0169355_27	PF03592,COG3728	N/A	N/A	N/A	N/A
PHROG	UHGV-0169355_28	phrog_36	46.2	0.00000000000081	transcriptional regulator	transcription regulation
eggNOG-mapper	UHGV-0169355_28	428125.CLOLEP_01806	263.0	0	N/A	N/A
structural_annotation	UHGV-0169355_28	PF07374,TIGR01636	N/A	N/A	N/A	N/A
PHROG	UHGV-0169355_33	phrog_7704	43.0	0.0000000000078	N/A	unknown function
UniRef90	UHGV-0169355_33	UniRef90_U2R3A7	105.0	1.33e-27	N/A	N/A
eggNOG-mapper	UHGV-0169355_33	665950.HMPREF1025_02540	78.2	7.78e-17	N/A	N/A
Pfam	UHGV-0169355_33	PF04448	N/A	N/A	N/A	DUF551
structural_annotation	UHGV-0169355_33	PF04448,NF041588	N/A	N/A	N/A	N/A
PHROG	UHGV-0169355_34	phrog_22543	43.0	0.0000000000062	N/A	unknown function
UniRef90	UHGV-0169355_35	UniRef90_A0A8J6PM04	95.1	2.19e-24	N/A	N/A
structural_annotation	UHGV-0169355_35	NF041588	N/A	N/A	N/A	N/A
PHROG	UHGV-0169355_37	phrog_2245	90.6	1.6e-26	nucleoside triphosphate pyrophosphohydrolase	other
UniRef90	UHGV-0169355_37	UniRef90_A0A4U9RLZ8	84.0	3.05e-19	N/A	N/A
eggNOG-mapper	UHGV-0169355_37	428125.CLOLEP_01814	175.0	0	COG NOG14118 non supervised orthologous group	N/A
structural_annotation	UHGV-0169355_37	PF12643,MF_01020,TIGR03188	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0169355_38	PF17399	N/A	N/A	N/A	N/A
KOfam	UHGV-0169355_41	K01160	47.5	0.00000000000048	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-0169355_41	phrog_140	108.5	5.6e-32	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0169355_41	UniRef90_A0A1C6HG31	285.0	0	Holliday junction resolvase	N/A
eggNOG-mapper	UHGV-0169355_41	411461.DORFOR_00015	120.0	5.47e-33	Endodeoxyribonuclease RusA	N/A
Pfam	UHGV-0169355_41	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-0169355_41	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-0169355_41	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
KOfam	UHGV-0169355_42	K02315	124.6	1.1e-36	dnaC; DNA replication protein DnaC	N/A
PHROG	UHGV-0169355_42	phrog_50	122.5	4.6e-36	DnaC-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0169355_42	UniRef90_A0A1C6HFV4	488.0	0	DNA replication protein	N/A
eggNOG-mapper	UHGV-0169355_42	445972.ANACOL_01829	264.0	0	N/A	N/A
Pfam	UHGV-0169355_42	PF01695	N/A	N/A	IstB-like ATP binding protein	IstB_IS21
COG	UHGV-0169355_42	COG1484	N/A	N/A	DNA replication protein DnaC	N/A
structural_annotation	UHGV-0169355_42	PF01695,MF_01158,NF005378,COG1484	N/A	N/A	N/A	N/A
PHROG	UHGV-0169355_43	phrog_16304	60.5	6.8e-18	N/A	unknown function
UniRef90	UHGV-0169355_43	UniRef90_A0A1C6HII5	348.0	0	N/A	N/A
eggNOG-mapper	UHGV-0169355_43	203119.Cthe_2466	66.6	0.000000000289	N/A	N/A
Pfam	UHGV-0169355_43	PF19808	N/A	N/A	N/A	DUF6291
PHROG	UHGV-0169355_44	phrog_2113	47.9	0.00000000000017	N/A	unknown function
UniRef90	UHGV-0169355_44	UniRef90_A0A3A6EZF7	60.5	0.00000000169	HTH domain-containing protein	N/A
structural_annotation	UHGV-0169355_44	PF21715	N/A	N/A	N/A	N/A
KOfam	UHGV-0169355_45	K03111	146.7	2.29813e-43	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0169355_45	phrog_44	148.9	2.66247e-44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0169355_45	UniRef90_A7VPP2	203.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0169355_45	428125.CLOLEP_00518	203.0	0	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-0169355_45	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0169355_45	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0169355_45	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0169355_45	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0169355_45	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0169355_46	phrog_7566	84.2	9.8e-25	N/A	unknown function
UniRef90	UHGV-0169355_46	UniRef90_A0A371ATG2	57.4	0.0000000194	Phosphoenolpyruvate carboxykinase	N/A
eggNOG-mapper	UHGV-0169355_46	693746.OBV_25470	109.0	1.97e-29	N/A	N/A
PHROG	UHGV-0169355_47	phrog_72	54.7	5.8e-16	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0169355_47	UniRef90_A0A8D9PDS2	131.0	1.45e-35	NinB protein	N/A
eggNOG-mapper	UHGV-0169355_47	445972.ANACOL_01825	186.0	0	N/A	N/A
structural_annotation	UHGV-0169355_47	PF05772	N/A	N/A	N/A	N/A
PHROG	UHGV-0169355_48	phrog_659	209.2	0	Sak-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0169355_48	UniRef90_A0A843HUJ5	233.0	0	N/A	N/A
eggNOG-mapper	UHGV-0169355_48	1507.HMPREF0262_00431	268.0	0	N/A	N/A
Pfam	UHGV-0169355_48	PF06378	N/A	N/A	N/A	DUF1071
structural_annotation	UHGV-0169355_48	PF06378,TIGR00607,COG4712	N/A	N/A	N/A	N/A
Pfam	UHGV-0169355_52	PF12728	N/A	N/A	Helix-turn-helix domain	HTH_17
Pfam	UHGV-0169355_59	PF12728	N/A	N/A	Helix-turn-helix domain	HTH_17
UniRef90	UHGV-0169355_62	UniRef90_UPI001D00CEEC	104.0	7.92e-28	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0169355_62	428125.CLOLEP_02737	138.0	4.70976e-42	N/A	N/A
structural_annotation	UHGV-0169355_62	TIGR03070	N/A	N/A	N/A	N/A
PHROG	UHGV-0169355_63	phrog_8	52.4	0.000000000000012	transcriptional regulator	transcription regulation
UniRef90	UHGV-0169355_63	UniRef90_A0A1C6FNL9	207.0	0	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0169355_63	428125.CLOLEP_02738	171.0	0	SMART helix-turn-helix domain protein	N/A
COG	UHGV-0169355_63	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0169355_63	PF12844,NF041951,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-0169355_64	phrog_87	77.6	1.3e-22	metallo-protease	other
UniRef90	UHGV-0169355_64	UniRef90_A7VVX5	280.0	0	ImmA/IrrE family metallo-endopeptidase	N/A
eggNOG-mapper	UHGV-0169355_64	428125.CLOLEP_02739	280.0	0	N/A	N/A
Pfam	UHGV-0169355_64	PF06114	N/A	N/A	IrrE N-terminal-like domain	Peptidase_M78
COG	UHGV-0169355_64	COG2856	N/A	N/A	Zn-dependent peptidase ImmA, M78 family	N/A
structural_annotation	UHGV-0169355_64	PF06114,COG2856	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0169355	Yes	36,062	44	100	1
UHGV-1380269	No	36,062	44	100	1
UHGV-1427267	No	23,099	45	67	1
UHGV-1438895	No	18,732	46	58	1
UHGV-1569081	No	16,208	46	50	1
UHGV-1806101	No	15,791	47	48	1
UHGV-1690637	No	12,934	48	40	1
UHGV-1552306	No	11,382	48	35	1
UHGV-1552754	No	11,255	46	35	1