vOTU vOTU-078768

vOTU: vOTU-078768

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-078768
Number of genomes	1
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium → Faecalibacterium prausnitzii_C
Taxonomy (UHGV)	vFAM-00006 → vSUBFAM-00991 → vGENUS-03098 → vSUBGEN-18907 → vOTU-078768
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → HGM13006 → HGM13006 sp900756575
Host range breadth	Species
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0035165
Biosample ID	SAMEA4969129
Genome length (bp)	36,712 bps
CheckV completeness	90.72% (High-quality)
CDS count	52
CDS density	88.15%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → HGM13006 → HGM13006 sp900756575	Total connections	7	Host agreement	85.71
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium → Faecalibacterium prausnitzii_C	Total connections	1	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 90.72)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-0035165_3	UniRef90_A0A098GES5	112.0	2.42e-29	Putative phage associated protein	N/A
PHROG	UHGV-0035165_5	phrog_38338	72.9	5.1e-21	N/A	unknown function
eggNOG-mapper	UHGV-0035165_5	693746.OBV_25410	86.3	3.42e-20	N/A	N/A
PHROG	UHGV-0035165_6	phrog_8470	244.7	0	N/A	unknown function
UniRef90	UHGV-0035165_6	UniRef90_UPI001C00AC20	114.0	1.1e-23	PcfJ domain-containing protein	N/A
eggNOG-mapper	UHGV-0035165_6	693746.OBV_25400	189.0	0	PcfJ-like protein	N/A
Pfam	UHGV-0035165_6	PF14284	N/A	N/A	PcfJ-like protein	PcfJ
structural_annotation	UHGV-0035165_6	PF14284	N/A	N/A	N/A	N/A
PHROG	UHGV-0035165_7	phrog_15609	227.3	0	N/A	unknown function
UniRef90	UHGV-0035165_7	UniRef90_A0A7G9WGA3	129.0	7.24e-31	N/A	N/A
eggNOG-mapper	UHGV-0035165_7	1501230.ET33_21155	140.0	2.78e-36	N/A	N/A
Pfam	UHGV-0035165_7	PF11300	N/A	N/A	N/A	DUF3102
COG	UHGV-0035165_7	COG0188	N/A	N/A	DNA gyrase/topoisomerase IV, subunit A	N/A
structural_annotation	UHGV-0035165_7	PF11300,PF07321,NF038070	N/A	N/A	N/A	N/A
PHROG	UHGV-0035165_11	phrog_599	43.7	0.00000000000035	Lar-like restriction alleviation protein	moron, auxiliary metabolic gene and host takeover
eggNOG-mapper	UHGV-0035165_11	1235790.C805_00069	51.6	0.000000629	Restriction alleviation protein Lar	N/A
Pfam	UHGV-0035165_11	PF14354	N/A	N/A	Restriction alleviation protein Lar	Lar_restr_allev
NCBIFam	UHGV-0035165_11	TIGR03655.1	N/A	N/A	Lar family restriction alleviation protein	N/A
structural_annotation	UHGV-0035165_11	PF14354,TIGR03655	N/A	N/A	N/A	N/A
KOfam	UHGV-0035165_12	K22299	40.9	0.000000000042	rghR; HTH-type transcriptional regulator, competence development regulator	N/A
PHROG	UHGV-0035165_12	phrog_8	47.3	0.00000000000046	transcriptional regulator	transcription regulation
UniRef90	UHGV-0035165_12	UniRef90_A0A1I5WIF0	62.4	0.000000000114	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
eggNOG-mapper	UHGV-0035165_12	1304880.JAGB01000001_gene917	62.4	0.000000000019	PFAM Helix-turn-helix	N/A
Pfam	UHGV-0035165_12	PF12844	N/A	N/A	Helix-turn-helix domain	HTH_19
COG	UHGV-0035165_12	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0035165_12	PF12844,MF_00535,NF041951,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-0035165_14	phrog_190	115.4	4.9e-34	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0035165_14	UniRef90_A0A845R8D4	145.0	9.88056e-42	N/A	N/A
eggNOG-mapper	UHGV-0035165_14	693746.OBV_25250	138.0	9.28e-40	N/A	N/A
Pfam	UHGV-0035165_14	PF06356	N/A	N/A	N/A	DUF1064
structural_annotation	UHGV-0035165_14	PF06356,NF033179	N/A	N/A	N/A	N/A
PHROG	UHGV-0035165_16	phrog_3584	210.4	0	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0035165_16	1519439.JPJG01000060_gene1883	177.0	0	N/A	N/A
structural_annotation	UHGV-0035165_16	PF21578,NF033538	N/A	N/A	N/A	N/A
PHROG	UHGV-0035165_19	phrog_13890	51.2	0.000000000000016	N/A	unknown function
UniRef90	UHGV-0035165_19	UniRef90_UPI0018A94567	82.0	3.57e-19	ABC transporter ATP-binding protein	N/A
eggNOG-mapper	UHGV-0035165_19	877414.ATWA01000049_gene449	69.3	0.00000000000000639	N/A	N/A
structural_annotation	UHGV-0035165_19	PF10723,NF010256	N/A	N/A	N/A	N/A
COG	UHGV-0035165_21	COG0211	N/A	N/A	Ribosomal protein L27	N/A
structural_annotation	UHGV-0035165_21	PF14201	N/A	N/A	N/A	N/A
PHROG	UHGV-0035165_22	phrog_5110	63.0	5.1e-21	terminase small subunit	head and packaging
UniRef90	UHGV-0035165_22	UniRef90_A0A1G4FJQ3	57.4	0.000000137	Putative phage terminase, small subunit, P27 family	N/A
eggNOG-mapper	UHGV-0035165_22	1235792.C808_00082	52.8	0.00000122	N/A	N/A
Pfam	UHGV-0035165_22	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
PHROG	UHGV-0035165_23	phrog_9	297.4	0	terminase large subunit	head and packaging
UniRef90	UHGV-0035165_23	UniRef90_A0A1T4YES7	607.0	0	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
eggNOG-mapper	UHGV-0035165_23	86416.Clopa_0337	572.0	0	Phage Terminase	N/A
Pfam	UHGV-0035165_23	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0035165_23	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0035165_23	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0035165_23	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0035165_24	phrog_12	118.0	6.5e-35	portal protein	head and packaging
UniRef90	UHGV-0035165_24	UniRef90_A0A413HUL0	199.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0035165_24	864178.E2ELI3_9CAUD	152.0	2.71e-39	Phage portal protein	N/A
Pfam	UHGV-0035165_24	PF04860	N/A	N/A	Phage portal protein	Phage_portal
structural_annotation	UHGV-0035165_24	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-0035165_25	K01358	109.2	5e-32	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-0035165_25	phrog_94	179.4	0	head maturation protease	head and packaging
UniRef90	UHGV-0035165_25	UniRef90_UPI00156EEE56	174.0	0	Clp protease ClpP	N/A
eggNOG-mapper	UHGV-0035165_25	553184.ATORI0001_1180	153.0	3.30706e-43	Clp protease	N/A
Pfam	UHGV-0035165_25	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-0035165_25	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-0035165_25	PF00574,MF_00444,NF009203,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-0035165_26	phrog_10	119.5	3.2e-35	major head protein	head and packaging
UniRef90	UHGV-0035165_26	UniRef90_UPI00057E1B20	322.0	0	phage major capsid protein	N/A
eggNOG-mapper	UHGV-0035165_26	1211817.CCAT010000053_gene2132	295.0	0	Phage capsid family	N/A
Pfam	UHGV-0035165_26	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0035165_26	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0035165_26	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0035165_26	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0035165_27	phrog_749	57.4	2.5e-16	N/A	unknown function
UniRef90	UHGV-0035165_27	UniRef90_A0A285G775	69.3	0.000000000000215	Phage gp6-like head-tail connector protein	N/A
eggNOG-mapper	UHGV-0035165_27	86416.Clopa_0342	75.9	1.28e-16	N/A	N/A
PHROG	UHGV-0035165_28	phrog_19734	66.5	4.6e-19	N/A	unknown function
eggNOG-mapper	UHGV-0035165_28	349161.Dred_2602	62.0	0.000000000116	N/A	N/A
structural_annotation	UHGV-0035165_28	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0035165_29	PF05657,COG5003	N/A	N/A	N/A	N/A
PHROG	UHGV-0035165_30	phrog_5	41.9	0.000000000021	tail completion or Neck1 protein	connector
UniRef90	UHGV-0035165_30	UniRef90_R5IIS5	57.0	0.000000104	HK97 gp10 family phage protein	N/A
structural_annotation	UHGV-0035165_30	TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-0035165_31	phrog_88	48.0	0.00000000000022	major tail protein	tail
structural_annotation	UHGV-0035165_31	PF04630,TIGR01603,COG3498	N/A	N/A	N/A	N/A
KOfam	UHGV-0035165_33	K19326	73.7	1.5e-23	SYNE1; nesprin-1	N/A
PHROG	UHGV-0035165_33	phrog_1533	371.8	0	tail length tape measure protein	tail
UniRef90	UHGV-0035165_33	UniRef90_A0A7X5IQS8	319.0	0	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-0035165_33	445972.ANACOL_00191	251.0	0	Phage-related minor tail protein	N/A
Pfam	UHGV-0035165_33	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
NCBIFam	UHGV-0035165_33	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
COG	UHGV-0035165_33	COG5283	N/A	N/A	Phage-related tail protein	N/A
structural_annotation	UHGV-0035165_33	PF10145,TIGR01760,COG5280	N/A	N/A	N/A	N/A
PHROG	UHGV-0035165_34	phrog_33	44.8	0.00000000000056	distal tail protein Dit	tail
eggNOG-mapper	UHGV-0035165_34	1118055.CAGU01000013_gene767	89.0	8.34e-18	N/A	N/A
structural_annotation	UHGV-0035165_34	PF05709,PF21621,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0035165_35	phrog_3558	370.8	0	tail protein	tail
UniRef90	UHGV-0035165_35	UniRef90_UPI001373F113	252.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-0035165_35	411465.PEPMIC_00746	215.0	0	Prophage endopeptidase tail	N/A
Pfam	UHGV-0035165_35	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-0035165_35	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0035165_35	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0035165_35	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0035165_36	phrog_199	64.8	1.2e-18	holin	lysis
UniRef90	UHGV-0035165_36	UniRef90_A0A6G3M4V0	148.0	6.78228e-43	Holin	N/A
eggNOG-mapper	UHGV-0035165_36	411471.SUBVAR_05868	136.0	7.14e-39	toxin secretion phage lysis holin	N/A
Pfam	UHGV-0035165_36	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-0035165_36	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
COG	UHGV-0035165_36	COG4824	N/A	N/A	Phage-related holin (Lysis protein)	N/A
structural_annotation	UHGV-0035165_36	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
KOfam	UHGV-0035165_37	K07273	183.6	0	acm; lysozyme	N/A
PHROG	UHGV-0035165_37	phrog_291	143.6	1.80067e-42	endolysin	lysis
UniRef90	UHGV-0035165_37	UniRef90_A0A1I3PDY7	171.0	0	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
eggNOG-mapper	UHGV-0035165_37	553973.CLOHYLEM_07287	161.0	5.1848e-44	Glycosyl hydrolase, family 25	N/A
Pfam	UHGV-0035165_37	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
Pfam	UHGV-0035165_37	PF19127	N/A	N/A	Choline-binding repeat	Choline_bind_3
COG	UHGV-0035165_37	COG1388	N/A	N/A	LysM repeat	N/A
structural_annotation	UHGV-0035165_37	PF01183,PF19127,TIGR04035,TIGR04303,COG3757	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0035165_38	1235790.C805_00057	47.0	0.00000356	N/A	N/A
structural_annotation	UHGV-0035165_38	PF13404,TIGR01636	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0035165_39	1235798.C817_04600	53.9	0.0000000556	N/A	N/A
structural_annotation	UHGV-0035165_39	NF040522,COG2944	N/A	N/A	N/A	N/A
PHROG	UHGV-0035165_43	phrog_22984	47.6	0.00000000000032	N/A	unknown function
eggNOG-mapper	UHGV-0035165_44	397290.C810_05212	60.8	0.0000000195	N/A	N/A
structural_annotation	UHGV-0035165_45	PF18573,NF033147	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0035165_46	1408437.JNJN01000043_gene801	74.3	0.000000000000032	N/A	N/A
KOfam	UHGV-0035165_47	K06400	346.9	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-0035165_47	phrog_95	338.1	0	integrase	integration and excision
UniRef90	UHGV-0035165_47	UniRef90_A0A3A6JR24	384.0	0	Recombinase family protein	N/A
eggNOG-mapper	UHGV-0035165_47	665956.HMPREF1032_03589	384.0	0	N/A	N/A
Pfam	UHGV-0035165_47	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-0035165_47	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-0035165_47	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-0035165_47	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0035165_47	PF00239,PF07508,PF15188,NF041201,COG1961	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0035165_48	PF13560,TIGR03070,COG3655	N/A	N/A	N/A	N/A
KOfam	UHGV-0035165_51	K22300	68.8	1.2e-19	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0035165_51	phrog_2967	46.9	0.00000000000048	transcriptional regulator	transcription regulation
UniRef90	UHGV-0035165_51	UniRef90_UPI00189E0F3C	103.0	4.23e-26	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0035165_51	97138.C820_01960	79.7	1.78e-17	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0035165_51	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0035165_51	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0035165_51	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0035165	Yes	36,712	54	91	1