vOTU vOTU-079039

vOTU: vOTU-079039

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-079039
Number of genomes	1
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium → Faecalibacterium prausnitzii
Taxonomy (UHGV)	vFAM-00006 → vSUBFAM-00124 → vGENUS-00131 → vSUBGEN-33475 → vOTU-079039
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium
Host range breadth	Genus
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0120750
Biosample ID	SAMEA4431951
Genome length (bp)	42,372 bps
CheckV completeness	99.90% (High-quality)
CDS count	62
CDS density	89.66%
tRNA count	3
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium	Total connections	395	Host agreement	99.24
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium → Faecalibacterium prausnitzii	Total connections	2	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 99.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-0120750_1	UniRef90_X1SS04	46.6	0.00000514	GATase domain-containing protein (Fragment)	N/A
eggNOG-mapper	UHGV-0120750_1	657322.FPR_28980	77.8	1.57e-16	Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates	N/A
COG	UHGV-0120750_1	COG0504	N/A	N/A	CTP synthase (UTP-ammonia lyase)	N/A
KOfam	UHGV-0120750_2	K21021	196.1	0	tpbB; diguanylate cyclase [EC:2.7.7.65]	N/A
PHROG	UHGV-0120750_2	phrog_5594	133.1	1.8e-39	N/A	unknown function
UniRef90	UHGV-0120750_2	UniRef90_A0A173R6W7	1130.0	0	Probable diguanylate cyclase YdaM	N/A
eggNOG-mapper	UHGV-0120750_2	657322.FPR_28970	1159.0	0	diguanylate cyclase	N/A
Pfam	UHGV-0120750_2	PF00990	N/A	N/A	Diguanylate cyclase, GGDEF domain	GGDEF
NCBIFam	UHGV-0120750_2	TIGR00254.1	N/A	N/A	diguanylate cyclase	N/A
COG	UHGV-0120750_2	COG2199	N/A	N/A	GGDEF domain, diguanylate cyclase (c-di-GMP synthetase) or its enzymatically inactive variants	N/A
KOfam	UHGV-0120750_3	K14059	181.3	0	int; integrase	N/A
PHROG	UHGV-0120750_3	phrog_1	164.8	0	integrase	integration and excision
UniRef90	UHGV-0120750_3	UniRef90_A0A367GI93	220.0	0	Tyr recombinase domain-containing protein	N/A
eggNOG-mapper	UHGV-0120750_3	1507.HMPREF0262_00307	161.0	2.53635e-43	Phage integrase family	N/A
Pfam	UHGV-0120750_3	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0120750_3	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0120750_3	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
KOfam	UHGV-0120750_4	K07729	40.1	0.000000000052	K07729; putative transcriptional regulator	N/A
PHROG	UHGV-0120750_4	phrog_1373	43.1	0.0000000000034	transcriptional regulator	transcription regulation
UniRef90	UHGV-0120750_4	UniRef90_A0A2A7B6N3	191.0	0	HTH cro/C1-type domain-containing protein	N/A
Pfam	UHGV-0120750_4	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0120750_4	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0120750_4	PF13560,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0120750_8	394503.Ccel_2974	57.0	0.00000437	N/A	N/A
structural_annotation	UHGV-0120750_8	COG5342	N/A	N/A	N/A	N/A
UniRef90	UHGV-0120750_10	UniRef90_A0A2A7AM72	112.0	3.26e-30	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0120750_10	1378168.N510_01712	75.9	0.00000000000000312	N/A	N/A
structural_annotation	UHGV-0120750_10	PF12844,NF041951,COG1396	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0120750_11	PF21291,TIGR03070,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-0120750_18	phrog_14970	46.8	0.00000000000058	N/A	unknown function
COG	UHGV-0120750_18	COG4712	N/A	N/A	Predicted ssDNA annealing protein, contains HHH motif, Rad42/Rad22/RecT/erf family	N/A
structural_annotation	UHGV-0120750_18	PF04098,TIGR00607,COG4712	N/A	N/A	N/A	N/A
PHROG	UHGV-0120750_19	phrog_72	47.5	0.00000000000035	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0120750_19	411471.SUBVAR_05829	135.0	5.88e-38	N/A	N/A
structural_annotation	UHGV-0120750_19	PF05772,NF007281	N/A	N/A	N/A	N/A
PHROG	UHGV-0120750_21	phrog_7566	86.5	2.1e-25	N/A	unknown function
eggNOG-mapper	UHGV-0120750_21	411471.SUBVAR_05830	104.0	9.13e-28	N/A	N/A
KOfam	UHGV-0120750_22	K03111	140.6	1.79997e-41	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0120750_22	phrog_44	148.6	3.36312e-44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0120750_22	UniRef90_D4K451	210.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0120750_22	718252.FP2_06770	210.0	0	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	N/A
Pfam	UHGV-0120750_22	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0120750_22	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0120750_22	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0120750_22	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0120750_22	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0120750_23	phrog_6969	57.4	2e-16	N/A	unknown function
eggNOG-mapper	UHGV-0120750_23	748224.HMPREF9436_00735	158.0	8.54792e-44	N/A	N/A
Pfam	UHGV-0120750_23	PF13730	N/A	N/A	Helix-turn-helix domain	HTH_36
Pfam	UHGV-0120750_23	PF19481	N/A	N/A	N/A	DUF6017
COG	UHGV-0120750_23	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0120750_23	PF19481,PF01978,MF_01819,TIGR01610,COG5625	N/A	N/A	N/A	N/A
KOfam	UHGV-0120750_24	K03496	206.7	0	parA, soj; chromosome partitioning protein	N/A
PHROG	UHGV-0120750_24	phrog_164	155.8	0	ParA-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0120750_24	UniRef90_A0A2A7B6H3	360.0	0	AAA_31 domain-containing protein	N/A
eggNOG-mapper	UHGV-0120750_24	411471.SUBVAR_05839	229.0	0	AAA domain	N/A
Pfam	UHGV-0120750_24	PF13614	N/A	N/A	AAA domain	AAA_31
COG	UHGV-0120750_24	COG1192	N/A	N/A	ParA-like ATPase involved in chromosome/plasmid partitioning or cellulose biosynthesis protein BcsQ	N/A
structural_annotation	UHGV-0120750_24	PF13614,MF_00533,TIGR03453,COG1192	N/A	N/A	N/A	N/A
UniRef90	UHGV-0120750_25	UniRef90_A0A845R8R0	107.0	2.61e-27	N/A	N/A
KOfam	UHGV-0120750_26	K03497	88.5	1.5e-25	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	N/A
PHROG	UHGV-0120750_26	phrog_4715	120.6	1.4e-35	ParB-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0120750_26	UniRef90_A0A2A7AMC5	289.0	0	ParB domain-containing protein	N/A
eggNOG-mapper	UHGV-0120750_26	411471.SUBVAR_05842	179.0	0	ParB-like nuclease domain	N/A
Pfam	UHGV-0120750_26	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
COG	UHGV-0120750_26	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-0120750_26	PF02195,MF_02015,TIGR03764,COG1475	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0120750_27	PF04545	N/A	N/A	N/A	N/A
PHROG	UHGV-0120750_32	phrog_8680	201.6	0	N/A	unknown function
UniRef90	UHGV-0120750_32	UniRef90_A0A844D688	422.0	0	N/A	N/A
eggNOG-mapper	UHGV-0120750_32	1423790.BN53_04265	174.0	0	Belongs to the N(4) N(6)-methyltransferase family	N/A
Pfam	UHGV-0120750_32	PF14386	N/A	N/A	N/A	DUF4417
COG	UHGV-0120750_32	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-0120750_32	PF14386	N/A	N/A	N/A	N/A
PHROG	UHGV-0120750_33	phrog_119	58.2	1.3e-16	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0120750_33	UniRef90_A0A2A7B6I3	227.0	0	HNH domain-containing protein	N/A
eggNOG-mapper	UHGV-0120750_33	768710.DesyoDRAFT_1275	103.0	6.63e-27	HNH nucleases	N/A
Pfam	UHGV-0120750_33	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-0120750_33	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
PHROG	UHGV-0120750_34	phrog_13845	56.0	5.5e-16	N/A	unknown function
eggNOG-mapper	UHGV-0120750_34	1399942.U3PDR2_9CAUD	66.6	0.0000000000016	N/A	N/A
structural_annotation	UHGV-0120750_34	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
PHROG	UHGV-0120750_35	phrog_9	241.7	0	terminase large subunit	head and packaging
UniRef90	UHGV-0120750_35	UniRef90_A0A2A7ALT4	1060.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0120750_35	1235792.C808_00083	634.0	0	Phage terminase-like protein large subunit	N/A
Pfam	UHGV-0120750_35	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0120750_35	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0120750_35	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0120750_36	phrog_12	131.0	8.9e-39	portal protein	head and packaging
UniRef90	UHGV-0120750_36	UniRef90_A0A2A7B6S8	558.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0120750_36	349161.Dred_2606	259.0	0	Phage portal protein, HK97 family	N/A
Pfam	UHGV-0120750_36	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-0120750_36	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-0120750_36	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0120750_36	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-0120750_37	K01358	72.2	1e-20	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-0120750_37	phrog_94	127.2	2e-37	head maturation protease	head and packaging
UniRef90	UHGV-0120750_37	UniRef90_UPI00111E41DA	134.0	3.34e-35	Clp protease ClpP	N/A
eggNOG-mapper	UHGV-0120750_37	1232452.BAIB02000007_gene1626	125.0	1.35e-32	Belongs to the peptidase S14 family	N/A
Pfam	UHGV-0120750_37	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-0120750_37	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-0120750_37	PF00574,MF_00444,TIGR00493,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-0120750_38	phrog_10	128.1	5.9e-38	major head protein	head and packaging
UniRef90	UHGV-0120750_38	UniRef90_A0A2A7B712	720.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-0120750_38	1235792.C808_00086	442.0	0	Phage capsid family	N/A
Pfam	UHGV-0120750_38	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
Pfam	UHGV-0120750_38	PF12733	N/A	N/A	Cadherin-like beta sandwich domain	Cadherin-like
NCBIFam	UHGV-0120750_38	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0120750_38	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0120750_38	PF05065,PF12733,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0120750_39	phrog_749	54.8	0.0000000000000016	N/A	unknown function
eggNOG-mapper	UHGV-0120750_39	1211817.CCAT010000053_gene2133	62.8	0.0000000000224	N/A	N/A
PHROG	UHGV-0120750_40	phrog_19734	95.8	4.2e-28	N/A	unknown function
UniRef90	UHGV-0120750_40	UniRef90_A0A0D8I708	78.6	3.75e-16	Phage head-tail joining protein	N/A
eggNOG-mapper	UHGV-0120750_40	349161.Dred_2602	73.9	0.00000000000000388	N/A	N/A
structural_annotation	UHGV-0120750_40	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0120750_41	999413.HMPREF1094_02005	71.6	0.00000000000000883	N/A	N/A
structural_annotation	UHGV-0120750_41	PF05657,COG3167	N/A	N/A	N/A	N/A
PHROG	UHGV-0120750_42	phrog_5	49.3	0.000000000000089	tail completion or Neck1 protein	connector
UniRef90	UHGV-0120750_42	UniRef90_A0A1C6FG30	130.0	2.08e-35	Phage protein, HK97 gp10 family	N/A
eggNOG-mapper	UHGV-0120750_42	908340.HMPREF9406_2573	110.0	2.84e-28	N/A	N/A
structural_annotation	UHGV-0120750_42	TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-0120750_43	phrog_88	94.3	1.4e-27	major tail protein	tail
UniRef90	UHGV-0120750_43	UniRef90_G9YSC5	109.0	2.26e-26	Phage major tail protein, phi13 family	N/A
eggNOG-mapper	UHGV-0120750_43	33035.JPJF01000039_gene278	72.4	0.000000000000542	N/A	N/A
NCBIFam	UHGV-0120750_43	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-0120750_43	PF06488,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-0120750_46	phrog_9959	96.4	1.8e-28	tail length tape measure protein	tail
UniRef90	UHGV-0120750_46	UniRef90_A0A2A7ALS3	807.0	0	TMP_3 domain-containing protein	N/A
eggNOG-mapper	UHGV-0120750_46	1224164.B843_03450	177.0	1.0804e-42	Tail protein	N/A
Pfam	UHGV-0120750_46	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-0120750_46	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-0120750_46	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-0120750_46	PF20155,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0120750_47	phrog_33	75.1	1.7e-21	distal tail protein Dit	tail
UniRef90	UHGV-0120750_47	UniRef90_A0A173Z1X4	138.0	1.2e-36	Phage-related protein	N/A
eggNOG-mapper	UHGV-0120750_47	1232446.BAIE02000002_gene835	67.8	0.0000000000799	phage tail	N/A
NCBIFam	UHGV-0120750_47	TIGR01633.1	N/A	N/A	distal tail protein Dit	N/A
COG	UHGV-0120750_47	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0120750_47	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0120750_48	phrog_1067	173.1	0	minor head protein	head and packaging
UniRef90	UHGV-0120750_48	UniRef90_A0A2A7AM44	707.0	0	Prophage_tail domain-containing protein	N/A
eggNOG-mapper	UHGV-0120750_48	1123263.AUKY01000068_gene489	187.0	0	Phage minor structural protein	N/A
Pfam	UHGV-0120750_48	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-0120750_48	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0120750_48	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0120750_48	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
KOfam	UHGV-0120750_50	K01051	50.1	0.00000000000002	E3.1.1.11; pectinesterase [EC:3.1.1.11]	N/A
UniRef90	UHGV-0120750_50	UniRef90_UPI001D0919FE	120.0	5.94e-25	pectinesterase family protein	N/A
eggNOG-mapper	UHGV-0120750_50	610130.Closa_0759	83.6	0.0000000000000479	N/A	N/A
KOfam	UHGV-0120750_51	K07273	166.0	0	acm; lysozyme	N/A
PHROG	UHGV-0120750_51	phrog_291	128.1	8.9e-38	endolysin	lysis
UniRef90	UHGV-0120750_51	UniRef90_UPI001D0EE7D8	297.0	0	glycoside hydrolase family 25 protein	N/A
eggNOG-mapper	UHGV-0120750_51	748224.HMPREF9436_00154	280.0	0	hydrolase, family 25	N/A
Pfam	UHGV-0120750_51	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-0120750_51	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-0120750_51	PF01183,COG3757	N/A	N/A	N/A	N/A
PHROG	UHGV-0120750_53	phrog_15303	76.0	4.4e-22	N/A	unknown function
structural_annotation	UHGV-0120750_55	PF07374,MF_00245,NF001072,COG2739	N/A	N/A	N/A	N/A
KOfam	UHGV-0120750_56	K22300	62.3	1.3e-21	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0120750_56	phrog_8	72.0	1.1e-21	transcriptional regulator	transcription regulation
UniRef90	UHGV-0120750_56	UniRef90_A0A386H238	62.8	0.00000000343	Helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0120750_56	1235790.C805_00648	60.1	0.00000000945	Helix-turn-helix XRE-family like proteins	N/A
PADLOC	UHGV-0120750_56	retron_type_VI_hth_cluster2_1	45.4	0.00000000000019	N/A	Retron
Pfam	UHGV-0120750_56	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
Pfam	UHGV-0120750_56	PF13384	N/A	N/A	Homeodomain-like domain	HTH_23
COG	UHGV-0120750_56	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0120750_56	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-0120750_60	phrog_16490	101.8	6.8e-38	N/A	unknown function
eggNOG-mapper	UHGV-0120750_60	1408437.JNJN01000043_gene803	166.0	0	N/A	N/A
eggNOG-mapper	UHGV-0120750_61	658655.HMPREF0988_00916	116.0	9.9e-32	N/A	N/A
eggNOG-mapper	UHGV-0120750_62	1408437.JNJN01000043_gene801	97.4	2.28e-22	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0120750	Yes	42,372	53	100	1