vOTU vOTU-079042

vOTU: vOTU-079042

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-079042
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00060 → vSUBFAM-00265 → vGENUS-00909 → vSUBGEN-13159 → vOTU-079042
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae → Clostridium_A → Clostridium_A leptum
Host range breadth	Species
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0096603
Biosample ID	N/A
Genome length (bp)	33,728 bps
CheckV completeness	92.60% (High-quality)
CDS count	53
CDS density	91.69%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	PHIST
CRISPR-predicted host lineage		Total connections		Host agreement
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae → Clostridium_A → Clostridium_A leptum	Total connections	113	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 92.6)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0096603_1	K14059	226.1	0	int; integrase	N/A
PHROG	UHGV-0096603_1	phrog_1	203.5	0	integrase	integration and excision
UniRef90	UHGV-0096603_1	UniRef90_A0A1C6GKE6	811.0	0	Tyrosine recombinase XerD	N/A
eggNOG-mapper	UHGV-0096603_1	428125.CLOLEP_02743	417.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0096603_1	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0096603_1	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-0096603_1	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
PHROG	UHGV-0096603_2	phrog_215	43.4	0.0000000000081	structural protein with Ig domain	head and packaging
UniRef90	UHGV-0096603_2	UniRef90_A0A412AVB2	407.0	0	BIG2 domain-containing protein	N/A
eggNOG-mapper	UHGV-0096603_2	742723.HMPREF9477_00195	79.3	0.000000000000147	Bacterial Ig-like domain 2	N/A
Pfam	UHGV-0096603_2	PF02368	N/A	N/A	Bacterial Ig-like domain (group 2)	Big_2
COG	UHGV-0096603_2	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
KOfam	UHGV-0096603_4	K22300	48.8	0.00000000000016	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0096603_4	phrog_8	55.9	0.0000000000000013	transcriptional regulator	transcription regulation
UniRef90	UHGV-0096603_4	UniRef90_UPI001896E330	67.0	0.00000000000666	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0096603_4	742738.HMPREF9460_00775	63.5	0.000000000137	Peptidase S24-like	N/A
Pfam	UHGV-0096603_4	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0096603_4	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
structural_annotation	UHGV-0096603_4	PF01381,MF_02017,NF041951,COG3655	N/A	N/A	N/A	N/A
Pfam	UHGV-0096603_5	PF05339	N/A	N/A	N/A	DUF739
structural_annotation	UHGV-0096603_5	PF05339,NF041575,COG3655	N/A	N/A	N/A	N/A
UniRef90	UHGV-0096603_6	UniRef90_UPI0006C2E0EF	76.3	1.33e-16	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0096603_6	1430331.EP10_02425	68.6	0.0000000000000211	N/A	N/A
structural_annotation	UHGV-0096603_6	PF05339,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-0096603_7	phrog_5079	70.5	1.8e-20	N/A	unknown function
UniRef90	UHGV-0096603_7	UniRef90_A0A090I2F2	52.0	0.0000000611	Putative secreted protein	N/A
eggNOG-mapper	UHGV-0096603_7	875454.BAEW01000002_gene495	52.0	0.0000000102	N/A	N/A
PHROG	UHGV-0096603_8	phrog_14088	55.0	8.2e-16	N/A	unknown function
UniRef90	UHGV-0096603_8	UniRef90_A0A3R6M7R7	72.0	0.0000000000000029	Carboxypeptidase	N/A
eggNOG-mapper	UHGV-0096603_8	1256908.HMPREF0373_00648	74.7	4.27e-17	N/A	N/A
PHROG	UHGV-0096603_9	phrog_1305	126.9	1.3e-37	DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0096603_9	UniRef90_UPI0018984E24	173.0	0	N/A	N/A
eggNOG-mapper	UHGV-0096603_9	1453503.AU05_21100	131.0	4.5e-35	N/A	N/A
structural_annotation	UHGV-0096603_9	COG2250	N/A	N/A	N/A	N/A
UniRef90	UHGV-0096603_10	UniRef90_UPI0005510EBF	64.7	0.00000000000344	helix-turn-helix domain-containing protein	N/A
Pfam	UHGV-0096603_10	PF12728	N/A	N/A	Helix-turn-helix domain	HTH_17
PHROG	UHGV-0096603_15	phrog_659	209.4	0	Sak-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0096603_15	UniRef90_A0A843HUJ5	233.0	0	N/A	N/A
eggNOG-mapper	UHGV-0096603_15	1507.HMPREF0262_00431	267.0	0	N/A	N/A
Pfam	UHGV-0096603_15	PF06378	N/A	N/A	N/A	DUF1071
structural_annotation	UHGV-0096603_15	PF06378,TIGR00607,COG4712	N/A	N/A	N/A	N/A
PHROG	UHGV-0096603_16	phrog_72	55.1	4.7e-16	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0096603_16	UniRef90_A0A8D9PDS2	132.0	1.02e-35	NinB protein	N/A
eggNOG-mapper	UHGV-0096603_16	445972.ANACOL_01825	186.0	0	N/A	N/A
structural_annotation	UHGV-0096603_16	PF05772	N/A	N/A	N/A	N/A
PHROG	UHGV-0096603_17	phrog_7566	83.3	2e-24	N/A	unknown function
UniRef90	UHGV-0096603_17	UniRef90_A0A371ATG2	57.0	0.0000000274	Phosphoenolpyruvate carboxykinase	N/A
eggNOG-mapper	UHGV-0096603_17	693746.OBV_25470	108.0	2.8e-29	N/A	N/A
KOfam	UHGV-0096603_18	K03111	148.1	9.24857e-44	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0096603_18	phrog_44	146.7	1.30321e-43	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0096603_18	UniRef90_A7VPP2	206.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0096603_18	428125.CLOLEP_00518	206.0	0	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-0096603_18	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0096603_18	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0096603_18	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0096603_18	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0096603_18	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0096603_19	phrog_2113	46.3	0.00000000000056	N/A	unknown function
UniRef90	UHGV-0096603_19	UniRef90_A0A3A6EZF7	58.2	0.0000000133	HTH domain-containing protein	N/A
structural_annotation	UHGV-0096603_19	PF21715	N/A	N/A	N/A	N/A
PHROG	UHGV-0096603_20	phrog_2149	102.2	7e-30	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0096603_20	521460.Athe_2433	105.0	5.33e-23	N/A	N/A
structural_annotation	UHGV-0096603_20	PF01475,TIGR01610,COG0735	N/A	N/A	N/A	N/A
KOfam	UHGV-0096603_21	K02315	123.5	2.5e-36	dnaC; DNA replication protein DnaC	N/A
PHROG	UHGV-0096603_21	phrog_50	121.6	8.7e-36	DnaC-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0096603_21	UniRef90_A0A1C6HFV4	497.0	0	DNA replication protein	N/A
eggNOG-mapper	UHGV-0096603_21	445972.ANACOL_01829	258.0	0	N/A	N/A
Pfam	UHGV-0096603_21	PF01695	N/A	N/A	IstB-like ATP binding protein	IstB_IS21
COG	UHGV-0096603_21	COG1484	N/A	N/A	DNA replication protein DnaC	N/A
structural_annotation	UHGV-0096603_21	PF01695,MF_00377,NF005378,COG1484	N/A	N/A	N/A	N/A
KOfam	UHGV-0096603_22	K01160	47.1	0.00000000000069	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-0096603_22	phrog_140	107.0	1.8e-31	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0096603_22	UniRef90_A0A1C6HG31	288.0	0	Holliday junction resolvase	N/A
eggNOG-mapper	UHGV-0096603_22	411461.DORFOR_00015	119.0	1.55e-32	Endodeoxyribonuclease RusA	N/A
Pfam	UHGV-0096603_22	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-0096603_22	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-0096603_22	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
PHROG	UHGV-0096603_25	phrog_2245	95.2	7.2e-28	nucleoside triphosphate pyrophosphohydrolase	other
UniRef90	UHGV-0096603_25	UniRef90_A0A4U9RLZ8	84.3	2.07e-19	N/A	N/A
eggNOG-mapper	UHGV-0096603_25	428125.CLOLEP_01814	168.0	0	COG NOG14118 non supervised orthologous group	N/A
structural_annotation	UHGV-0096603_25	PF12643,MF_01020,TIGR03188	N/A	N/A	N/A	N/A
UniRef90	UHGV-0096603_28	UniRef90_A0A8D9PDT5	58.2	0.0000000112	Hydrogenase/urease nickel incorporation protein	N/A
PHROG	UHGV-0096603_30	phrog_924	50.5	0.000000000000041	N/A	unknown function
UniRef90	UHGV-0096603_30	UniRef90_A0A413FXK7	110.0	4.09e-29	N/A	N/A
Pfam	UHGV-0096603_30	PF04448	N/A	N/A	N/A	DUF551
PHROG	UHGV-0096603_32	phrog_36	49.8	0.000000000000065	transcriptional regulator	transcription regulation
eggNOG-mapper	UHGV-0096603_32	428125.CLOLEP_01806	288.0	0	N/A	N/A
structural_annotation	UHGV-0096603_32	PF07374,TIGR01636	N/A	N/A	N/A	N/A
PHROG	UHGV-0096603_33	phrog_24579	190.3	0	terminase small subunit	head and packaging
UniRef90	UHGV-0096603_33	UniRef90_R6N2B3	218.0	0	HTH_Tnp_1_2 domain-containing protein	N/A
eggNOG-mapper	UHGV-0096603_33	1123288.SOV_2c10540	85.9	1.27e-19	Helix-turn-helix of insertion element transposase	N/A
Pfam	UHGV-0096603_33	PF13022	N/A	N/A	Helix-turn-helix of insertion element transposase	HTH_Tnp_1_2
structural_annotation	UHGV-0096603_33	PF13022	N/A	N/A	N/A	N/A
KOfam	UHGV-0096603_34	K06909	379.6	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0096603_34	phrog_3717	144.1	8.60397e-43	terminase large subunit	head and packaging
UniRef90	UHGV-0096603_34	UniRef90_R6P8C3	852.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0096603_34	411471.SUBVAR_06507	543.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-0096603_34	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-0096603_34	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-0096603_34	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0096603_34	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0096603_34	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0096603_35	phrog_533	281.3	0	portal protein	head and packaging
UniRef90	UHGV-0096603_35	UniRef90_R6NIR1	908.0	0	Bacteriophage portal protein SPP1 Gp6-like protein	N/A
eggNOG-mapper	UHGV-0096603_35	665956.HMPREF1032_03069	167.0	1.55544e-43	N/A	N/A
structural_annotation	UHGV-0096603_35	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0096603_36	phrog_581	381.3	0	minor head protein	head and packaging
UniRef90	UHGV-0096603_36	UniRef90_A0A1C6H425	1058.0	0	Phage minor capsid protein 2	N/A
eggNOG-mapper	UHGV-0096603_36	645991.Sgly_0338	435.0	0	N/A	N/A
Pfam	UHGV-0096603_36	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
Pfam	UHGV-0096603_36	PF03496	N/A	N/A	ADP-ribosyltransferase exoenzyme	ADPrib_exo_Tox
COG	UHGV-0096603_36	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0096603_36	PF06152,PF03496,MF_04139,NF041404	N/A	N/A	N/A	N/A
PHROG	UHGV-0096603_38	phrog_194	69.1	5.1e-20	head scaffolding protein	head and packaging
UniRef90	UHGV-0096603_38	UniRef90_R6NCU4	344.0	0	Putative scaffolding protein	N/A
eggNOG-mapper	UHGV-0096603_38	663278.Ethha_0497	167.0	0	N/A	N/A
Pfam	UHGV-0096603_38	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-0096603_38	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-0096603_39	phrog_267	50.3	0.000000000000028	major head protein	head and packaging
eggNOG-mapper	UHGV-0096603_39	33035.JPJF01000030_gene2294	233.0	0	N/A	N/A
structural_annotation	UHGV-0096603_39	PF11651,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0096603_40	phrog_541	61.2	1.8e-17	head-tail adaptor	connector
PHROG	UHGV-0096603_41	phrog_3366	105.2	3.2e-31	N/A	unknown function
eggNOG-mapper	UHGV-0096603_41	663278.Ethha_0494	110.0	1.5e-29	N/A	N/A
Pfam	UHGV-0096603_41	PF20536	N/A	N/A	N/A	DUF6751
structural_annotation	UHGV-0096603_41	PF20536,COG1853	N/A	N/A	N/A	N/A
PHROG	UHGV-0096603_42	phrog_556	137.9	2.89999e-41	minor head protein	head and packaging
UniRef90	UHGV-0096603_42	UniRef90_UPI001D074B8B	163.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0096603_42	663278.Ethha_0493	145.0	2.98477e-43	Minor capsid protein	N/A
Pfam	UHGV-0096603_42	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0096603_42	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0096603_43	phrog_3266	164.9	0	tail completion	connector
UniRef90	UHGV-0096603_43	UniRef90_UPI001F2730AA	136.0	1.75e-38	chloramphenicol resistance protein	N/A
eggNOG-mapper	UHGV-0096603_43	411471.SUBVAR_06989	175.0	0	N/A	N/A
structural_annotation	UHGV-0096603_43	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0096603_44	phrog_3099	221.0	0	N/A	unknown function
UniRef90	UHGV-0096603_44	UniRef90_A0A0A8WE72	230.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0096603_44	903814.ELI_3202	203.0	0	N/A	N/A
structural_annotation	UHGV-0096603_44	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0096603_45	phrog_4450	121.5	4.8e-36	N/A	unknown function
UniRef90	UHGV-0096603_45	UniRef90_A0A3D3FBY8	81.6	1.58e-17	AP endonuclease	N/A
eggNOG-mapper	UHGV-0096603_45	545697.HMPREF0216_02856	73.6	0.00000000000000298	N/A	N/A
Pfam	UHGV-0096603_45	PF20378	N/A	N/A	N/A	DUF6673
structural_annotation	UHGV-0096603_45	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-0096603_46	phrog_706	181.3	0	N/A	unknown function
UniRef90	UHGV-0096603_46	UniRef90_A0A1C6FZV2	271.0	0	Bacteriophage Gp15 protein	N/A
eggNOG-mapper	UHGV-0096603_46	1499683.CCFF01000017_gene2567	218.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0096603_46	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0096603_46	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0096603_48	phrog_9959	188.8	0	tail length tape measure protein	tail
UniRef90	UHGV-0096603_48	UniRef90_R6NCT4	1424.0	0	Phage tail tape measure protein TP901 family	N/A
eggNOG-mapper	UHGV-0096603_48	663278.Ethha_0487	347.0	0	Phage tail tape measure protein, TP901 family	N/A
Pfam	UHGV-0096603_48	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-0096603_48	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-0096603_48	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-0096603_48	PF10145,TIGR01760,COG5280	N/A	N/A	N/A	N/A
PHROG	UHGV-0096603_49	phrog_33	41.3	0.0000000000049	distal tail protein Dit	tail
UniRef90	UHGV-0096603_49	UniRef90_R6N293	456.0	0	Putative phage tail component domain protein	N/A
COG	UHGV-0096603_49	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0096603_49	PF20753,PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0096603_50	phrog_5555	597.8	0	tail protein	tail
UniRef90	UHGV-0096603_50	UniRef90_R6P8A1	1426.0	0	Peptidase S74 domain-containing protein	N/A
eggNOG-mapper	UHGV-0096603_50	999413.HMPREF1094_00205	214.0	0	N/A	N/A
Pfam	UHGV-0096603_50	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-0096603_50	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0096603_50	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0096603_50	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0096603_51	phrog_19280	55.2	9.9e-16	N/A	unknown function
UniRef90	UHGV-0096603_51	UniRef90_A0A412AXT4	496.0	0	N/A	N/A
eggNOG-mapper	UHGV-0096603_51	428125.CLOLEP_02045	225.0	0	N/A	N/A
Pfam	UHGV-0096603_51	PF10651	N/A	N/A	BppU N-terminal domain	BppU_N
PHROG	UHGV-0096603_52	phrog_7121	187.4	0	tail fiber protein	tail
UniRef90	UHGV-0096603_52	UniRef90_A0A1C6HHX6	479.0	0	Peptidase S74 domain-containing protein	N/A
eggNOG-mapper	UHGV-0096603_52	428125.CLOLEP_00172	432.0	0	COG COG5295 Autotransporter adhesin	N/A
Pfam	UHGV-0096603_52	PF13884	N/A	N/A	Chaperone of endosialidase	Peptidase_S74
UniRef90	UHGV-0096603_53	UniRef90_R6NDD3	98.2	1.68e-25	Glycosyl hydrolase family 25	N/A
structural_annotation	UHGV-0096603_53	PF02796,COG2771	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0096603	Yes	33,728	46	93	1