vOTU vOTU-079182

vOTU: vOTU-079182

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-079182
Number of genomes	5
Taxonomy (ICTV)	Bacteria → Firmicutes → Bacilli → RF39 → UBA660 → Scybalousia → Scybalousia sp900542735
Taxonomy (UHGV)	vFAM-00025 → vSUBFAM-01564 → vGENUS-02205 → vSUBGEN-17489 → vOTU-079182
Host lineage	Bacteria → Firmicutes → Bacilli → RF39 → UBA660 → Scybalousia → Scybalousia sp900542735
Host range breadth	Species
Lifestyle	temperate (Evidence: geNomad)

Representative genome
Genome ID	UHGV-0205862
Biosample ID	N/A
Genome length (bp)	34,850 bps
CheckV completeness	94.58% (High-quality)
CDS count	63
CDS density	93.36%
tRNA count	1
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	PHIST
CRISPR-predicted host lineage	Bacteria → Firmicutes → Bacilli → RF39 → UBA660	Total connections	11	Host agreement	90.91
PHIST-predicted host lineage	Bacteria → Firmicutes → Bacilli → RF39 → UBA660 → Scybalousia → Scybalousia sp900542735	Total connections	16	Host agreement	93.75

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 94.58)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-0205862_1	UniRef90_UPI001BAA7404	54.3	0.0000000965	phage holin, LLH family	N/A
Pfam	UHGV-0205862_1	PF09682	N/A	N/A	Bacteriophage holin of superfamily 6 (Holin_LLH)	Phage_holin_6_1
PHROG	UHGV-0205862_5	phrog_24267	64.2	2.4e-18	N/A	unknown function
UniRef90	UHGV-0205862_5	UniRef90_U4TBN9	62.8	0.0000000041	Putative prophage LambdaSa04, minor structural protein	N/A
eggNOG-mapper	UHGV-0205862_5	1354303.M917_0802	62.8	0.000000000688	tail collar domain protein	N/A
COG	UHGV-0205862_5	COG4675	N/A	N/A	Phage tail collar domain	N/A
structural_annotation	UHGV-0205862_5	COG4675	N/A	N/A	N/A	N/A
PHROG	UHGV-0205862_8	phrog_6616	51.9	0.0000000000000065	tail protein	tail
structural_annotation	UHGV-0205862_9	PF20458,TIGR02126,COG5437	N/A	N/A	N/A	N/A
KOfam	UHGV-0205862_10	K10421	42.1	0.0000000000062	CLIP1, RSN; CAP-Gly domain-containing linker protein 1	N/A
PHROG	UHGV-0205862_10	phrog_1535	134.6	0	tail length tape measure protein	tail
UniRef90	UHGV-0205862_10	UniRef90_A0A810PX76	87.0	0.0000000000000453	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-0205862_10	1160721.RBI_II00528	117.0	2.89e-24	Phage tail tape measure protein, TP901 family	N/A
COG	UHGV-0205862_10	COG1006	N/A	N/A	Multisubunit Na+/H+ antiporter, MnhC subunit	N/A
PHROG	UHGV-0205862_11	phrog_706	139.5	2.09999e-41	N/A	unknown function
UniRef90	UHGV-0205862_11	UniRef90_A0A1V6D632	142.0	2.34e-39	Bacteriophage Gp15 protein	N/A
eggNOG-mapper	UHGV-0205862_11	645991.Sgly_0348	154.0	8.40779e-45	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0205862_11	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0205862_11	PF06854	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0205862_12	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-0205862_13	phrog_3099	80.5	2.2e-23	N/A	unknown function
eggNOG-mapper	UHGV-0205862_13	1449050.JNLE01000003_gene3884	79.0	4.14e-16	N/A	N/A
structural_annotation	UHGV-0205862_13	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0205862_14	phrog_3266	110.3	1.1e-32	tail completion	connector
UniRef90	UHGV-0205862_14	UniRef90_A0A846K5J6	96.3	1.49e-22	Chloramphenicol resistance protein	N/A
eggNOG-mapper	UHGV-0205862_14	536233.CLO_0890	98.2	4.43e-24	N/A	N/A
structural_annotation	UHGV-0205862_14	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0205862_15	phrog_556	42.6	0.0000000000078	minor head protein	head and packaging
UniRef90	UHGV-0205862_15	UniRef90_UPI001F06267A	99.4	1.1e-23	minor capsid protein	N/A
eggNOG-mapper	UHGV-0205862_15	476272.RUMHYD_01780	63.9	0.0000000000873	N/A	N/A
structural_annotation	UHGV-0205862_15	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0205862_16	phrog_3366	63.3	4.4e-18	N/A	unknown function
structural_annotation	UHGV-0205862_16	PF20536	N/A	N/A	N/A	N/A
PHROG	UHGV-0205862_17	phrog_541	87.6	1.1e-25	head-tail adaptor	connector
eggNOG-mapper	UHGV-0205862_17	545697.HMPREF0216_02851	65.9	0.00000000000445	N/A	N/A
PHROG	UHGV-0205862_19	phrog_422	213.1	0	major head protein	head and packaging
UniRef90	UHGV-0205862_19	UniRef90_W0U896	219.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-0205862_19	1123263.AUKY01000051_gene1080	245.0	0	N/A	N/A
structural_annotation	UHGV-0205862_19	PF21703,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
UniRef90	UHGV-0205862_20	UniRef90_UPI00117868A2	101.0	1.55e-23	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-0205862_20	642492.Clole_0820	77.0	0.00000000000000713	PFAM Phage minor structural	N/A
Pfam	UHGV-0205862_20	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
PHROG	UHGV-0205862_22	phrog_581	200.1	0	minor head protein	head and packaging
UniRef90	UHGV-0205862_22	UniRef90_R5XZV2	226.0	0	Protein gp4	N/A
eggNOG-mapper	UHGV-0205862_22	1232449.BAHV02000010_gene2710	142.0	1.17e-33	N/A	N/A
Pfam	UHGV-0205862_22	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
Pfam	UHGV-0205862_22	PF03496	N/A	N/A	ADP-ribosyltransferase exoenzyme	ADPrib_exo_Tox
COG	UHGV-0205862_22	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0205862_22	PF03496,PF04233,NF041404,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-0205862_23	phrog_533	281.1	0	portal protein	head and packaging
UniRef90	UHGV-0205862_23	UniRef90_R6Y8H1	451.0	0	Minor capsid protein	N/A
eggNOG-mapper	UHGV-0205862_23	545697.HMPREF0216_02845	305.0	0	N/A	N/A
Pfam	UHGV-0205862_23	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0205862_23	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0205862_24	K06909	191.7	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0205862_24	phrog_10250	112.7	2.3e-33	N/A	unknown function
UniRef90	UHGV-0205862_24	UniRef90_A0A3B8SL24	724.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0205862_24	428127.EUBDOL_01229	540.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-0205862_24	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
NCBIFam	UHGV-0205862_24	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0205862_24	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0205862_24	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0205862_25	phrog_309	163.4	0	terminase small subunit	head and packaging
UniRef90	UHGV-0205862_25	UniRef90_A0A7X5CDW9	166.0	0	Helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0205862_25	742733.HMPREF9469_01828	147.0	2.29813e-43	transposase activity	N/A
Pfam	UHGV-0205862_25	PF01527	N/A	N/A	Transposase	HTH_Tnp_1
COG	UHGV-0205862_25	COG2963	N/A	N/A	Transposase InsE and inactivated derivatives	N/A
structural_annotation	UHGV-0205862_25	PF07141	N/A	N/A	N/A	N/A
PHROG	UHGV-0205862_28	phrog_355	60.4	3.1e-17	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0205862_28	UniRef90_UPI0013ED9517	95.1	6.56e-23	N/A	N/A
eggNOG-mapper	UHGV-0205862_28	999411.HMPREF1092_00897	77.0	3.71e-17	N/A	N/A
Pfam	UHGV-0205862_28	PF14359	N/A	N/A	N/A	DUF4406
structural_annotation	UHGV-0205862_28	PF14359,MF_03036,TIGR03646,COG3613	N/A	N/A	N/A	N/A
PHROG	UHGV-0205862_29	phrog_190	132.7	2.1e-39	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0205862_29	UniRef90_A0A843JAF3	112.0	1.28e-29	N/A	N/A
eggNOG-mapper	UHGV-0205862_29	445974.CLORAM_02947	103.0	1.04e-26	N/A	N/A
Pfam	UHGV-0205862_29	PF06356	N/A	N/A	N/A	DUF1064
structural_annotation	UHGV-0205862_29	PF06356,MF_04160,NF033179	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0205862_30	MF_00859,COG4451	N/A	N/A	N/A	N/A
Pfam	UHGV-0205862_31	PF04545	N/A	N/A	Sigma-70, region 4	Sigma70_r4
structural_annotation	UHGV-0205862_31	PF04545,MF_00674,NF008895,COG1595	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0205862_39	PF07011,MF_00683,NF041454	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0205862_40	1232446.BAIE02000011_gene1618	53.5	0.0000000861	N/A	N/A
PHROG	UHGV-0205862_43	phrog_799	95.3	7.1e-28	DNA methyltransferase	other
UniRef90	UHGV-0205862_43	UniRef90_UPI001624FD69	286.0	0	sugar-phosphate nucleotidyltransferase	N/A
eggNOG-mapper	UHGV-0205862_43	1458856.A0A059T5F9_9CAUD	275.0	0	methyltransferase activity	N/A
structural_annotation	UHGV-0205862_43	PF05869,MF_01872,TIGR01712,COG2263	N/A	N/A	N/A	N/A
PHROG	UHGV-0205862_48	phrog_25509	62.3	6.7e-18	N/A	unknown function
KOfam	UHGV-0205862_49	K06167	82.4	6.1e-24	phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]	N/A
PHROG	UHGV-0205862_49	phrog_392	164.2	0	metal-dependent hydrolase	other
UniRef90	UHGV-0205862_49	UniRef90_A0A829I425	119.0	1.89e-29	Phage-like hydrolase	N/A
eggNOG-mapper	UHGV-0205862_49	1118057.CAGX01000058_gene97	115.0	1.67e-28	Beta-lactamase superfamily domain	N/A
Pfam	UHGV-0205862_49	PF12706	N/A	N/A	Beta-lactamase superfamily domain	Lactamase_B_2
dbAPIS	UHGV-0205862_49	APIS062	N/A	N/A	N/A	N/A
COG	UHGV-0205862_49	COG1235	N/A	N/A	Phosphoribosyl 1,2-cyclic phosphate phosphodiesterase	N/A
structural_annotation	UHGV-0205862_49	PF02112,MF_01818,NF041851,COG1234	N/A	N/A	N/A	N/A
KOfam	UHGV-0205862_50	K07455	169.2	0	recT; recombination protein RecT	N/A
PHROG	UHGV-0205862_50	phrog_148	206.6	0	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0205862_50	UniRef90_UPI0019569AC1	207.0	0	recombinase RecT	N/A
eggNOG-mapper	UHGV-0205862_50	1382358.JHVN01000024_gene1692	202.0	0	RecT protein	N/A
Pfam	UHGV-0205862_50	PF03837	N/A	N/A	RecT family	RecT
COG	UHGV-0205862_50	COG3723	N/A	N/A	Recombinational DNA repair protein RecT	N/A
structural_annotation	UHGV-0205862_50	PF03837,NF007351,COG3723	N/A	N/A	N/A	N/A
KOfam	UHGV-0205862_51	K19171	95.0	5.9e-28	dndD; DNA sulfur modification protein DndD	N/A
PHROG	UHGV-0205862_51	phrog_77	134.0	1.1e-39	SbcC-like subunit of palindrome specific endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0205862_51	UniRef90_UPI0006F10C76	149.0	2.96e-34	AAA family ATPase	N/A
eggNOG-mapper	UHGV-0205862_51	1391647.AVSV01000022_gene2522	119.0	3.17e-25	nuclear chromosome segregation	N/A
Pfam	UHGV-0205862_51	PF02463	N/A	N/A	RecF/RecN/SMC N terminal domain	SMC_N
COG	UHGV-0205862_51	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
structural_annotation	UHGV-0205862_51	PF02463,MF_00449,NF041034,COG0419	N/A	N/A	N/A	N/A
KOfam	UHGV-0205862_53	K02086	77.2	2.3e-22	dnaD; DNA replication protein	N/A
PHROG	UHGV-0205862_53	phrog_186	107.3	1.8e-31	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0205862_53	UniRef90_A0A318KSV9	129.0	3.05e-33	DnaD/phage-associated family protein	N/A
eggNOG-mapper	UHGV-0205862_53	397291.C804_01603	135.0	3.98e-36	DnaD domain protein	N/A
Pfam	UHGV-0205862_53	PF07261	N/A	N/A	Replication initiation and membrane attachment	DnaB_2
NCBIFam	UHGV-0205862_53	TIGR01446.1	N/A	N/A	DnaD domain protein	N/A
COG	UHGV-0205862_53	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0205862_53	PF10771,MF_01177,TIGR01714,COG3935	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0205862_57	PF13560,NF041677,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0205862_58	K22300	65.0	1.6e-18	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0205862_58	phrog_8	66.4	6.5e-19	transcriptional regulator	transcription regulation
UniRef90	UHGV-0205862_58	UniRef90_R5A425	70.9	0.000000000000199	DNA-binding helix-turn-helix protein	N/A
eggNOG-mapper	UHGV-0205862_58	1302863.I872_10325	59.3	0.000000000944	sequence-specific DNA binding	N/A
Pfam	UHGV-0205862_58	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0205862_58	COG3620	N/A	N/A	Predicted transcriptional regulator, contains an XRE-type HTH domain (archaeal members contain CBS pair)	N/A
structural_annotation	UHGV-0205862_58	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
UniRef90	UHGV-0205862_59	UniRef90_A0A3B8SNC0	126.0	1.48e-35	Peptidase_M78 domain-containing protein	N/A
Pfam	UHGV-0205862_59	PF06114	N/A	N/A	IrrE N-terminal-like domain	Peptidase_M78
structural_annotation	UHGV-0205862_59	PF06114,COG2856	N/A	N/A	N/A	N/A
KOfam	UHGV-0205862_61	K06400	276.9	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-0205862_61	phrog_95	290.1	0	integrase	integration and excision
UniRef90	UHGV-0205862_61	UniRef90_UPI0007748959	332.0	0	recombinase family protein	N/A
eggNOG-mapper	UHGV-0205862_61	525254.HMPREF0072_1329	301.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-0205862_61	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-0205862_61	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-0205862_61	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-0205862_61	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0205862_61	PF00239,NF041201,COG1961	N/A	N/A	N/A	N/A
KOfam	UHGV-0205862_62	K02049	70.1	3.9e-20	ABC.SN.A; NitT/TauT family transport system ATP-binding protein	N/A
UniRef90	UHGV-0205862_62	UniRef90_R5LLP1	139.0	2.53999e-40	ABC transporter related	N/A
eggNOG-mapper	UHGV-0205862_62	445971.ANASTE_01160	122.0	2.23e-33	ABC-type nitrate sulfonate bicarbonate transport system, ATPase component	N/A
COG	UHGV-0205862_62	COG1116	N/A	N/A	ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component	N/A
KOfam	UHGV-0205862_63	K02050	196.5	0	ABC.SN.P; NitT/TauT family transport system permease protein	N/A
PHROG	UHGV-0205862_63	phrog_6743	87.3	1.6e-25	N/A	unknown function
UniRef90	UHGV-0205862_63	UniRef90_R5LRT0	336.0	0	ABC transporter permease protein	N/A
eggNOG-mapper	UHGV-0205862_63	445971.ANASTE_01159	270.0	0	N/A	N/A
Pfam	UHGV-0205862_63	PF00528	N/A	N/A	Binding-protein-dependent transport system inner membrane component	BPD_transp_1
COG	UHGV-0205862_63	COG0600	N/A	N/A	ABC-type nitrate/sulfonate/bicarbonate transport system, permease component	N/A
structural_annotation	UHGV-0205862_63	PF00528,NF007545,COG0600	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0205862	Yes	34,850	27	95	1
UHGV-1943829	No	34,850	27	95	1
UHGV-1532828	No	30,021	28	81	1
UHGV-2238632	No	15,473	28	42	1
UHGV-2216502	No	10,528	26	13	1