vOTU vOTU-079252

vOTU: vOTU-079252

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-079252
Number of genomes	3
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00154 → vSUBFAM-01343 → vGENUS-17937 → vSUBGEN-33688 → vOTU-079252
Host lineage	Bacteria → Firmicutes_C → Negativicutes → Acidaminococcales → Acidaminococcaceae → Phascolarctobacterium_A
Host range breadth	Genus
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0033694
Biosample ID	SAMEA4766288
Genome length (bp)	39,126 bps
CheckV completeness	99.90% (High-quality)
CDS count	57
CDS density	92.66%
tRNA count	2
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_C → Negativicutes → Acidaminococcales → Acidaminococcaceae → Phascolarctobacterium_A	Total connections	10	Host agreement	90
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 99.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0033694_1	K11754	459.8	0	folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]	N/A
PHROG	UHGV-0033694_1	phrog_16655	400.2	0	N/A	unknown function
UniRef90	UHGV-0033694_1	UniRef90_E8LC32	788.0	0	Bifunctional protein FolC	N/A
eggNOG-mapper	UHGV-0033694_1	626939.HMPREF9443_00398	788.0	0	Belongs to the folylpolyglutamate synthase family	N/A
Pfam	UHGV-0033694_1	PF08245	N/A	N/A	Mur ligase middle domain	Mur_ligase_M
Pfam	UHGV-0033694_1	PF02875	N/A	N/A	Mur ligase family, glutamate ligase domain	Mur_ligase_C
NCBIFam	UHGV-0033694_1	TIGR01499.1	N/A	N/A	bifunctional protein FolC	N/A
COG	UHGV-0033694_1	COG0285	N/A	N/A	Folylpolyglutamate synthase/Dihydropteroate synthase	N/A
UniRef90	UHGV-0033694_2	UniRef90_A0A6I2UF97	159.0	0	N/A	N/A
eggNOG-mapper	UHGV-0033694_2	1235802.C823_02648	149.0	0	N/A	N/A
Pfam	UHGV-0033694_2	PF13711	N/A	N/A	N/A	DUF4160
eggNOG-mapper	UHGV-0033694_3	553973.CLOHYLEM_06117	140.0	2.30934e-42	N/A	N/A
KOfam	UHGV-0033694_5	K01448	155.8	0	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0033694_5	phrog_435	170.0	0	endolysin	lysis
UniRef90	UHGV-0033694_5	UniRef90_G4Q4B5	218.0	0	Cell wall hydrolase/autolysin	N/A
eggNOG-mapper	UHGV-0033694_5	591001.Acfer_1125	220.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-0033694_5	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
COG	UHGV-0033694_5	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0033694_5	PF01520,MF_00562,TIGR02883,COG0860	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0033694_9	477184.KYC_12803	81.3	2.62e-17	N/A	N/A
KOfam	UHGV-0033694_10	K00986	40.8	0.000000000021	ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]	N/A
PHROG	UHGV-0033694_10	phrog_1423	116.9	1.9e-34	Reverse transcriptase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0033694_10	UniRef90_UPI0013EC2EB0	291.0	0	reverse transcriptase domain-containing protein	N/A
eggNOG-mapper	UHGV-0033694_10	1273103.NM10_03051	257.0	0	Reverse transcriptase (RNA-dependent DNA polymerase)	N/A
COG	UHGV-0033694_10	COG3344	N/A	N/A	Retron-type reverse transcriptase	N/A
PHROG	UHGV-0033694_11	phrog_17147	420.2	0	N/A	unknown function
UniRef90	UHGV-0033694_11	UniRef90_A0A1M6MWL0	179.0	9.80909e-45	N-terminal domain of peptidoglycan hydrolase CwlO-containing protein	N/A
eggNOG-mapper	UHGV-0033694_11	1273103.NM10_03056	404.0	0	N/A	N/A
PHROG	UHGV-0033694_12	phrog_19695	54.2	0.0000000000000024	N/A	unknown function
PHROG	UHGV-0033694_13	phrog_1348	54.2	0.0000000000000029	tail fiber protein	tail
structural_annotation	UHGV-0033694_13	PF14301	N/A	N/A	N/A	N/A
PHROG	UHGV-0033694_14	phrog_13336	54.0	4.1e-18	N/A	unknown function
eggNOG-mapper	UHGV-0033694_14	2754.EH55_13265	99.0	7.52e-21	N/A	N/A
eggNOG-mapper	UHGV-0033694_15	568816.Acin_1905	402.0	0	N/A	N/A
structural_annotation	UHGV-0033694_15	PF14594,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-0033694_16	phrog_33	77.6	2.4e-22	distal tail protein Dit	tail
UniRef90	UHGV-0033694_16	UniRef90_UPI0015588CAB	293.0	0	phage tail family protein	N/A
eggNOG-mapper	UHGV-0033694_16	568816.Acin_1906	168.0	0	Phage tail protein	N/A
Pfam	UHGV-0033694_16	PF05709	N/A	N/A	Phage tail protein RIFT-related domain	Sipho_tail
structural_annotation	UHGV-0033694_16	PF20753,PF19512,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0033694_17	phrog_12798	173.7	0	N/A	unknown function
UniRef90	UHGV-0033694_17	UniRef90_R6WQ18	526.0	0	Tape measure domain-containing protein	N/A
eggNOG-mapper	UHGV-0033694_17	2754.EH55_13250	188.0	0	tape measure	N/A
Pfam	UHGV-0033694_17	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-0033694_17	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-0033694_17	COG0419	N/A	N/A	DNA repair exonuclease SbcCD ATPase subunit	N/A
structural_annotation	UHGV-0033694_17	PF20155,MF_04138,TIGR01760,COG3941	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0033694_19	PF11836	N/A	N/A	N/A	N/A
PHROG	UHGV-0033694_20	phrog_1407	96.3	2.8e-28	major tail protein	tail
UniRef90	UHGV-0033694_20	UniRef90_A0A380NJ51	138.0	1.26e-38	Predicted secreted protein	N/A
eggNOG-mapper	UHGV-0033694_20	1000569.HMPREF1040_0191	134.0	9.44e-38	Phage tail tube protein	N/A
Pfam	UHGV-0033694_20	PF06199	N/A	N/A	Phage tail tube protein	Phage_tail_2
COG	UHGV-0033694_20	COG5437	N/A	N/A	Phage tail protein, TP901-1 family	N/A
structural_annotation	UHGV-0033694_20	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
UniRef90	UHGV-0033694_21	UniRef90_R6WK09	85.1	1.01e-18	Conserved domain protein	N/A
eggNOG-mapper	UHGV-0033694_21	1280706.AUJE01000003_gene2256	57.8	0.00000000831	N/A	N/A
structural_annotation	UHGV-0033694_21	PF08873,COG5003	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0033694_22	1111454.HMPREF1250_1049	81.3	4.12e-18	N/A	N/A
PHROG	UHGV-0033694_23	phrog_5	41.2	0.000000000036	tail completion or Neck1 protein	connector
UniRef90	UHGV-0033694_23	UniRef90_UPI000F8E0EA5	85.1	3.98e-18	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0033694_23	1280706.AUJE01000003_gene2258	96.3	2.72e-23	Phage virion morphogenesis	N/A
COG	UHGV-0033694_23	COG5005	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0033694_23	TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-0033694_25	phrog_422	228.1	0	major head protein	head and packaging
UniRef90	UHGV-0033694_25	UniRef90_R6WWZ7	382.0	0	Gp7	N/A
eggNOG-mapper	UHGV-0033694_25	1430331.EP10_10365	324.0	0	N/A	N/A
structural_annotation	UHGV-0033694_25	PF19821,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0033694_26	1280706.AUJE01000003_gene2260	103.0	1.27e-24	N/A	N/A
structural_annotation	UHGV-0033694_26	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-0033694_28	phrog_1657	87.0	3.3e-29	head morphogenesis	head and packaging
UniRef90	UHGV-0033694_28	UniRef90_R6AE12	375.0	0	TNT domain-containing protein	N/A
eggNOG-mapper	UHGV-0033694_28	1232428.CAVO010000021_gene805	260.0	0	N/A	N/A
PHROG	UHGV-0033694_29	phrog_145	153.0	0	portal protein	head and packaging
UniRef90	UHGV-0033694_29	UniRef90_R6WQ48	606.0	0	Conserved domain protein	N/A
eggNOG-mapper	UHGV-0033694_29	1232428.CAVO010000021_gene806	319.0	0	N/A	N/A
structural_annotation	UHGV-0033694_29	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0033694_30	phrog_30251	629.5	0	terminase large subunit	head and packaging
UniRef90	UHGV-0033694_30	UniRef90_UPI001F2335B1	626.0	0	phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0033694_30	1499683.CCFF01000014_gene3915	593.0	0	TIGRFAM Phage	N/A
NCBIFam	UHGV-0033694_30	TIGR01630.1	N/A	N/A	phage terminase large subunit	N/A
COG	UHGV-0033694_30	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0033694_30	PF17289,PF03237,MF_04147,NF033889,COG5410,COG5362	N/A	N/A	N/A	N/A
COG	UHGV-0033694_31	COG2963	N/A	N/A	Transposase InsE and inactivated derivatives	N/A
structural_annotation	UHGV-0033694_31	PF07141	N/A	N/A	N/A	N/A
KOfam	UHGV-0033694_32	K22226	83.0	3.6e-24	ahbC; Fe-coproporphyrin III synthase	N/A
UniRef90	UHGV-0033694_32	UniRef90_H3K6T6	311.0	0	Radical SAM core domain-containing protein	N/A
eggNOG-mapper	UHGV-0033694_32	411459.RUMOBE_01047	276.0	0	Radical SAM superfamily	N/A
Pfam	UHGV-0033694_32	PF04055	N/A	N/A	Radical SAM superfamily	Radical_SAM
COG	UHGV-0033694_32	COG0535	N/A	N/A	Radical SAM superfamily maturase, SkfB/NifB/PqqE family	N/A
structural_annotation	UHGV-0033694_32	PF00834,MF_00660,NF012164,COG0535	N/A	N/A	N/A	N/A
PHROG	UHGV-0033694_33	phrog_842	209.8	0	beta-glucosyl-HMC-alpha-glucosyltransferase	other
UniRef90	UHGV-0033694_33	UniRef90_A0A516LJ12	271.0	0	Putative beta-glucosyl-HMC-alpha-glucosyl-transferase	N/A
eggNOG-mapper	UHGV-0033694_33	508419.F8J156_9CAUD	201.0	0	N/A	N/A
Pfam	UHGV-0033694_33	PF20691	N/A	N/A	TET-Associated Glycosyltransferase	TAGT
structural_annotation	UHGV-0033694_33	PF20691,NF041865,COG1216	N/A	N/A	N/A	N/A
KOfam	UHGV-0033694_34	K03497	66.9	4.3e-19	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	N/A
PHROG	UHGV-0033694_34	phrog_620	176.1	0	ParB-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0033694_34	UniRef90_UPI000FD68CF7	250.0	0	ParB N-terminal domain-containing protein	N/A
eggNOG-mapper	UHGV-0033694_34	1416334.X2CXX2_9CAUD	235.0	0	N-methyltransferase activity	N/A
PADLOC	UHGV-0033694_34	MTase_II_00015	93.4	3.7e-27	Type II methyltransferase	RM
Pfam	UHGV-0033694_34	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
structural_annotation	UHGV-0033694_34	PF02195,TIGR00180,COG5119	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0033694_35	PF05263,MF_00245,TIGR01636,COG2739	N/A	N/A	N/A	N/A
PHROG	UHGV-0033694_36	phrog_190	146.9	9.66896e-44	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0033694_36	UniRef90_UPI0018C4B0C5	124.0	2.49e-34	N/A	N/A
eggNOG-mapper	UHGV-0033694_36	1347392.CCEZ01000043_gene417	118.0	6.49e-33	N/A	N/A
Pfam	UHGV-0033694_36	PF06356	N/A	N/A	N/A	DUF1064
structural_annotation	UHGV-0033694_36	PF06356,MF_04160,NF033179	N/A	N/A	N/A	N/A
KOfam	UHGV-0033694_37	K03111	145.2	6.50202e-43	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0033694_37	phrog_44	152.2	2.8026e-45	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0033694_37	UniRef90_E8LE33	199.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0033694_37	626939.HMPREF9443_01150	199.0	0	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	N/A
Pfam	UHGV-0033694_37	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0033694_37	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0033694_37	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0033694_37	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0033694_37	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0033694_38	phrog_236	98.5	1.1e-28	nucleotide kinase	other
UniRef90	UHGV-0033694_38	UniRef90_UPI0002882B90	118.0	5.3e-32	N/A	N/A
eggNOG-mapper	UHGV-0033694_38	1033743.CAES01000020_gene3148	118.0	6.63e-33	N/A	N/A
Pfam	UHGV-0033694_38	PF11753	N/A	N/A	N/A	DUF3310
structural_annotation	UHGV-0033694_38	PF11753	N/A	N/A	N/A	N/A
PHROG	UHGV-0033694_39	phrog_9403	60.0	3.2e-17	N/A	unknown function
Pfam	UHGV-0033694_39	PF14354	N/A	N/A	Restriction alleviation protein Lar	Lar_restr_allev
eggNOG-mapper	UHGV-0033694_40	469596.HMPREF9488_02297	94.0	1.74e-22	N/A	N/A
PHROG	UHGV-0033694_44	phrog_5968	161.0	0	replisome organizer	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0033694_44	UniRef90_C4IFA9	177.0	0	N/A	N/A
eggNOG-mapper	UHGV-0033694_44	632245.CLP_1613	177.0	0	N-terminal phage replisome organiser (Phage_rep_org_N)	N/A
Pfam	UHGV-0033694_44	PF09681	N/A	N/A	N-terminal phage replisome organiser (Phage_rep_org_N)	Phage_rep_org_N
Pfam	UHGV-0033694_44	PF07261	N/A	N/A	Replication initiation and membrane attachment	DnaB_2
NCBIFam	UHGV-0033694_44	TIGR01714.1	N/A	N/A	phage replisome organizer, putative, N-terminal region	N/A
COG	UHGV-0033694_44	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0033694_44	PF09681,TIGR01714,TIGR01446,COG3935	N/A	N/A	N/A	N/A
PHROG	UHGV-0033694_45	phrog_72	57.7	2.2e-16	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0033694_45	1304866.K413DRAFT_1197	160.0	0	N/A	N/A
structural_annotation	UHGV-0033694_45	PF05772,NF007281	N/A	N/A	N/A	N/A
PHROG	UHGV-0033694_46	phrog_155	149.4	1.96182e-44	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0033694_46	UniRef90_UPI000F63C62A	179.0	0	ERF family protein	N/A
eggNOG-mapper	UHGV-0033694_46	1289595.M1Q0X6_9VIRU	169.0	0	ERF superfamily	N/A
Pfam	UHGV-0033694_46	PF04404	N/A	N/A	ERF superfamily	ERF
structural_annotation	UHGV-0033694_46	PF04404,TIGR00607,COG4712	N/A	N/A	N/A	N/A
PHROG	UHGV-0033694_47	phrog_253	110.3	1.6e-32	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0033694_47	UniRef90_R6WX74	230.0	0	Siphovirus family protein	N/A
eggNOG-mapper	UHGV-0033694_47	411470.RUMGNA_02192	129.0	4.91e-36	Siphovirus Gp157	N/A
Pfam	UHGV-0033694_47	PF05565	N/A	N/A	Siphovirus Gp157	Sipho_Gp157
structural_annotation	UHGV-0033694_47	PF05565	N/A	N/A	N/A	N/A
Pfam	UHGV-0033694_49	PF01476	N/A	N/A	LysM domain	LysM
COG	UHGV-0033694_49	COG1388	N/A	N/A	LysM repeat	N/A
structural_annotation	UHGV-0033694_49	MF_02014,NF010723	N/A	N/A	N/A	N/A
NCBIFam	UHGV-0033694_50	TIGR01764.1	N/A	N/A	excisionase family DNA-binding protein	N/A
structural_annotation	UHGV-0033694_50	PF12728,TIGR01764,COG3311	N/A	N/A	N/A	N/A
KOfam	UHGV-0033694_51	K07729	56.2	8e-16	K07729; putative transcriptional regulator	N/A
PHROG	UHGV-0033694_51	phrog_8	43.6	0.000000000006	transcriptional regulator	transcription regulation
UniRef90	UHGV-0033694_51	UniRef90_A0A847PN47	64.3	0.00000000000404	Helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-0033694_51	718252.FP2_16270	55.5	0.00000000403	sequence-specific DNA binding	N/A
PADLOC	UHGV-0033694_51	retron_type_VI_hth_cluster2_1	41.0	0.000000000051	N/A	Retron
Pfam	UHGV-0033694_51	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0033694_51	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0033694_51	PF12844,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0033694_55	K07729	64.4	2.5e-18	K07729; putative transcriptional regulator	N/A
PHROG	UHGV-0033694_55	phrog_8	86.8	3.4e-25	transcriptional regulator	transcription regulation
UniRef90	UHGV-0033694_55	UniRef90_A0A316SAV3	119.0	1.65e-32	Transcriptional regulator	N/A
eggNOG-mapper	UHGV-0033694_55	768704.Desmer_4488	78.6	4.84e-17	PFAM Helix-turn-helix	N/A
PADLOC	UHGV-0033694_55	retron_type_VI_hth_cluster2_1	51.7	0.000000000000019	N/A	Retron
Pfam	UHGV-0033694_55	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0033694_55	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0033694_55	PF01381,MF_00535,NF007257,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-0033694_56	phrog_87	63.3	2.9e-18	metallo-protease	other
UniRef90	UHGV-0033694_56	UniRef90_UPI001032CAF7	150.0	3.08286e-44	ImmA/IrrE family metallo-endopeptidase	N/A
eggNOG-mapper	UHGV-0033694_56	203119.Cthe_2459	92.0	6.03e-22	IrrE N-terminal-like domain	N/A
Pfam	UHGV-0033694_56	PF06114	N/A	N/A	IrrE N-terminal-like domain	Peptidase_M78
COG	UHGV-0033694_56	COG2856	N/A	N/A	Zn-dependent peptidase ImmA, M78 family	N/A
structural_annotation	UHGV-0033694_56	PF06114,COG2856	N/A	N/A	N/A	N/A
KOfam	UHGV-0033694_57	K14059	237.2	0	int; integrase	N/A
PHROG	UHGV-0033694_57	phrog_1	193.3	0	integrase	integration and excision
UniRef90	UHGV-0033694_57	UniRef90_A0A1Q6R573	398.0	0	Tyr recombinase domain-containing protein	N/A
eggNOG-mapper	UHGV-0033694_57	1262914.BN533_00811	269.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0033694_57	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-0033694_57	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0033694_57	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0033694_57	PF00589,PF14659,MF_01808,TIGR02224,COG4974	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0033694	Yes	39,126	48	100	1
UHGV-0028513	No	37,875	48	97	1
UHGV-0028239	No	36,698	48	94	1