vOTU vOTU-079279

vOTU: vOTU-079279

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-079279
Number of genomes	1
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae
Taxonomy (UHGV)	vFAM-00006 → vSUBFAM-00124 → vGENUS-01155 → vSUBGEN-18197 → vOTU-079279
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium → Faecalibacterium prausnitzii_G
Host range breadth	Species
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0174973
Biosample ID	N/A
Genome length (bp)	40,227 bps
CheckV completeness	99.90% (High-quality)
CDS count	66
CDS density	90.34%
tRNA count	1
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium → Faecalibacterium prausnitzii_G	Total connections	624	Host agreement	74.04
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae	Total connections	3	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 99.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
structural_annotation	UHGV-0174973_2	PF12510	N/A	N/A	N/A	N/A
PHROG	UHGV-0174973_3	phrog_20016	202.8	0	N/A	unknown function
UniRef90	UHGV-0174973_3	UniRef90_A0A285PT46	216.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-0174973_3	1226322.HMPREF1545_00077	187.0	0	N/A	N/A
structural_annotation	UHGV-0174973_3	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-0174973_4	phrog_16490	193.4	0	N/A	unknown function
eggNOG-mapper	UHGV-0174973_4	397290.C810_01328	142.0	7.3e-38	N/A	N/A
PHROG	UHGV-0174973_5	phrog_22984	71.8	9.1e-21	N/A	unknown function
PHROG	UHGV-0174973_6	phrog_21718	88.9	6.4e-26	N/A	unknown function
eggNOG-mapper	UHGV-0174973_6	397290.C810_05210	79.3	1.61e-16	N/A	N/A
PHROG	UHGV-0174973_7	phrog_3754	93.7	2e-27	N/A	unknown function
eggNOG-mapper	UHGV-0174973_7	1235790.C805_00054	106.0	5.11e-28	N/A	N/A
eggNOG-mapper	UHGV-0174973_9	1235802.C823_04625	59.3	0.00000000366	N/A	N/A
structural_annotation	UHGV-0174973_9	PF13560,NF040522	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0174973_11	PF04545,MF_00245,NF001074,COG2739	N/A	N/A	N/A	N/A
PHROG	UHGV-0174973_13	phrog_15303	74.3	1.4e-21	N/A	unknown function
PHROG	UHGV-0174973_14	phrog_1863	76.8	1.5e-22	N/A	unknown function
eggNOG-mapper	UHGV-0174973_14	718252.FP2_04900	150.0	0	N/A	N/A
KOfam	UHGV-0174973_15	K07273	164.3	0	acm; lysozyme	N/A
PHROG	UHGV-0174973_15	phrog_291	128.9	4.3e-38	endolysin	lysis
UniRef90	UHGV-0174973_15	UniRef90_A0A564U0D3	343.0	0	Autolytic lysozyme	N/A
eggNOG-mapper	UHGV-0174973_15	718252.FP2_04890	216.0	0	hydrolase, family 25	N/A
Pfam	UHGV-0174973_15	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-0174973_15	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-0174973_15	PF01183,TIGR04053,COG3757	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0174973_16	PF10651,NF032891	N/A	N/A	N/A	N/A
PHROG	UHGV-0174973_18	phrog_1067	185.6	0	minor head protein	head and packaging
UniRef90	UHGV-0174973_18	UniRef90_A0A2A7AM44	494.0	0	Prophage_tail domain-containing protein	N/A
eggNOG-mapper	UHGV-0174973_18	1027396.LMOSA_21510	110.0	1.93e-22	Prophage endopeptidase tail	N/A
Pfam	UHGV-0174973_18	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-0174973_18	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0174973_18	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0174973_18	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0174973_19	phrog_33	85.8	9e-25	distal tail protein Dit	tail
UniRef90	UHGV-0174973_19	UniRef90_A0A1C6H6D2	131.0	3.81e-34	Phage-related protein	N/A
eggNOG-mapper	UHGV-0174973_19	439292.Bsel_2995	101.0	3.13e-23	tail component	N/A
COG	UHGV-0174973_19	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0174973_19	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0174973_20	phrog_9959	102.4	2.8e-30	tail length tape measure protein	tail
UniRef90	UHGV-0174973_20	UniRef90_A0A2A7ALS3	786.0	0	TMP_3 domain-containing protein	N/A
eggNOG-mapper	UHGV-0174973_20	596328.HMPREF0578_1241	159.0	6.16e-37	phage tail tape measure protein	N/A
Pfam	UHGV-0174973_20	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-0174973_20	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-0174973_20	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-0174973_20	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0174973_22	1286171.EAL2_c05960	51.2	0.00000411	N/A	N/A
PHROG	UHGV-0174973_23	phrog_88	87.3	1.9e-25	major tail protein	tail
UniRef90	UHGV-0174973_23	UniRef90_A0A7U9IBX1	133.0	9.62e-36	Phage major tail protein, phi13 family	N/A
eggNOG-mapper	UHGV-0174973_23	33035.JPJF01000039_gene278	79.3	0.00000000000000147	N/A	N/A
NCBIFam	UHGV-0174973_23	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-0174973_23	PF06488,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-0174973_24	phrog_5	47.8	0.00000000000031	tail completion or Neck1 protein	connector
UniRef90	UHGV-0174973_24	UniRef90_A0A1C6FG30	124.0	5.39e-33	Phage protein, HK97 gp10 family	N/A
eggNOG-mapper	UHGV-0174973_24	908340.HMPREF9406_2573	120.0	2.45e-32	N/A	N/A
Pfam	UHGV-0174973_24	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
NCBIFam	UHGV-0174973_24	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
structural_annotation	UHGV-0174973_24	TIGR01725	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0174973_25	999413.HMPREF1094_02005	67.8	0.000000000000284	N/A	N/A
structural_annotation	UHGV-0174973_25	PF05657,COG3167	N/A	N/A	N/A	N/A
PHROG	UHGV-0174973_26	phrog_19734	102.0	4.7e-30	N/A	unknown function
UniRef90	UHGV-0174973_26	UniRef90_A0A6I7GNS7	121.0	1.08e-32	Phage head closure protein	N/A
eggNOG-mapper	UHGV-0174973_26	349161.Dred_2602	74.3	0.00000000000000258	N/A	N/A
structural_annotation	UHGV-0174973_26	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0174973_27	phrog_749	54.6	0.0000000000000018	N/A	unknown function
UniRef90	UHGV-0174973_27	UniRef90_A0A7V7BBS9	68.9	0.000000000000469	Phage gp6-like head-tail connector protein	N/A
eggNOG-mapper	UHGV-0174973_27	1235792.C808_00087	80.5	2.61e-18	N/A	N/A
PHROG	UHGV-0174973_28	phrog_10	136.2	3.60001e-40	major head protein	head and packaging
UniRef90	UHGV-0174973_28	UniRef90_A0A2A7B712	768.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-0174973_28	1235792.C808_00086	458.0	0	Phage capsid family	N/A
Pfam	UHGV-0174973_28	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
Pfam	UHGV-0174973_28	PF12733	N/A	N/A	Cadherin-like beta sandwich domain	Cadherin-like
NCBIFam	UHGV-0174973_28	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0174973_28	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0174973_28	PF05065,PF12733,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-0174973_29	K01358	89.0	7.2e-26	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-0174973_29	phrog_94	138.5	7.39998e-41	head maturation protease	head and packaging
UniRef90	UHGV-0174973_29	UniRef90_UPI001C10F40E	156.0	3.75548e-43	Clp protease ClpP	N/A
eggNOG-mapper	UHGV-0174973_29	1232452.BAIB02000007_gene1626	145.0	3.53e-40	Belongs to the peptidase S14 family	N/A
Pfam	UHGV-0174973_29	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-0174973_29	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-0174973_29	PF00574,MF_00444,TIGR00493,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-0174973_30	phrog_12	133.0	1.9e-39	portal protein	head and packaging
UniRef90	UHGV-0174973_30	UniRef90_A0A2A7B6S8	562.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0174973_30	349161.Dred_2606	280.0	0	Phage portal protein, HK97 family	N/A
Pfam	UHGV-0174973_30	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-0174973_30	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-0174973_30	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0174973_30	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-0174973_31	phrog_9	234.5	0	terminase large subunit	head and packaging
UniRef90	UHGV-0174973_31	UniRef90_A0A2A7ALT4	1030.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0174973_31	610130.Closa_0741	625.0	0	Phage Terminase	N/A
Pfam	UHGV-0174973_31	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0174973_31	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0174973_31	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0174973_32	phrog_13845	61.2	1.3e-17	N/A	unknown function
eggNOG-mapper	UHGV-0174973_32	1399942.U3PDR2_9CAUD	70.9	0.0000000000000359	N/A	N/A
Pfam	UHGV-0174973_32	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
structural_annotation	UHGV-0174973_32	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
PHROG	UHGV-0174973_33	phrog_119	59.0	8.1e-17	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0174973_33	UniRef90_A0A2A7AM49	204.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-0174973_33	349161.Dred_2609	85.9	3.2e-20	HNH nucleases	N/A
COG	UHGV-0174973_33	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
eggNOG-mapper	UHGV-0174973_35	887929.HMP0721_1270	56.2	0.00000001	HNH nucleases	N/A
COG	UHGV-0174973_35	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
PHROG	UHGV-0174973_36	phrog_21498	274.9	0	N/A	unknown function
eggNOG-mapper	UHGV-0174973_36	78346.BRUM_0376	253.0	0	DNA binding	N/A
COG	UHGV-0174973_36	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-0174973_36	PF05869,TIGR01712	N/A	N/A	N/A	N/A
PHROG	UHGV-0174973_38	phrog_13999	63.0	3.1e-18	N/A	unknown function
eggNOG-mapper	UHGV-0174973_38	1391428.V5KT07_9CAUD	59.3	0.0000000000901	N/A	N/A
structural_annotation	UHGV-0174973_39	PF04545	N/A	N/A	N/A	N/A
KOfam	UHGV-0174973_40	K03497	74.7	2.3e-21	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	N/A
PHROG	UHGV-0174973_40	phrog_4715	105.9	3.6e-31	ParB-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0174973_40	UniRef90_A0A2A7AMC5	384.0	0	ParB domain-containing protein	N/A
eggNOG-mapper	UHGV-0174973_40	411471.SUBVAR_05842	178.0	0	ParB-like nuclease domain	N/A
Pfam	UHGV-0174973_40	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
COG	UHGV-0174973_40	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-0174973_40	PF02195,MF_02015,TIGR03764,COG1475	N/A	N/A	N/A	N/A
KOfam	UHGV-0174973_42	K03496	210.2	0	parA, soj; chromosome partitioning protein	N/A
PHROG	UHGV-0174973_42	phrog_164	151.7	4.2039e-45	ParA-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0174973_42	UniRef90_A0A2A7AM64	300.0	0	Cobyrinic acid a,c-diamide synthase	N/A
eggNOG-mapper	UHGV-0174973_42	411471.SUBVAR_05839	218.0	0	AAA domain	N/A
Pfam	UHGV-0174973_42	PF13614	N/A	N/A	AAA domain	AAA_31
COG	UHGV-0174973_42	COG1192	N/A	N/A	ParA-like ATPase involved in chromosome/plasmid partitioning or cellulose biosynthesis protein BcsQ	N/A
structural_annotation	UHGV-0174973_42	PF13614,MF_00533,TIGR03453,COG1192	N/A	N/A	N/A	N/A
PHROG	UHGV-0174973_44	phrog_6969	43.3	0.0000000000043	N/A	unknown function
eggNOG-mapper	UHGV-0174973_44	748224.HMPREF9436_00735	144.0	4.8e-38	N/A	N/A
Pfam	UHGV-0174973_44	PF19481	N/A	N/A	N/A	DUF6017
COG	UHGV-0174973_44	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0174973_44	PF19481,PF01978,MF_01819,TIGR01610,COG5625	N/A	N/A	N/A	N/A
KOfam	UHGV-0174973_45	K03111	137.9	1.2e-40	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0174973_45	phrog_44	141.3	5.70048e-42	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0174973_45	UniRef90_A0A2A7B6R5	242.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0174973_45	748224.HMPREF9436_00638	196.0	0	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-0174973_45	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0174973_45	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0174973_45	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0174973_45	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0174973_45	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0174973_46	phrog_7566	89.3	2.7e-26	N/A	unknown function
eggNOG-mapper	UHGV-0174973_46	411471.SUBVAR_05830	109.0	8.58e-30	N/A	N/A
PHROG	UHGV-0174973_49	phrog_72	50.8	0.000000000000026	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0174973_49	411471.SUBVAR_05829	137.0	1.52e-38	N/A	N/A
structural_annotation	UHGV-0174973_49	PF05772,NF007281	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0174973_50	PF04098,TIGR00607,COG4712	N/A	N/A	N/A	N/A
UniRef90	UHGV-0174973_53	UniRef90_A0A098GES5	135.0	3.36e-39	Putative phage associated protein	N/A
structural_annotation	UHGV-0174973_53	PF01423,MF_00257,NF001963,COG1958	N/A	N/A	N/A	N/A
UniRef90	UHGV-0174973_59	UniRef90_A0A2A7AM72	121.0	2.52e-33	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0174973_59	1378168.N510_01712	69.3	0.00000000000145	N/A	N/A
structural_annotation	UHGV-0174973_59	PF12844,NF041951,COG1396	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0174973_60	1536770.R50345_07130	58.2	0.000000563	N/A	N/A
structural_annotation	UHGV-0174973_60	PF06776,COG5342	N/A	N/A	N/A	N/A
PHROG	UHGV-0174973_61	phrog_4980	119.0	1.7e-36	superinfection exclusion	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0174973_61	UniRef90_UPI001876A0BB	83.6	2.21e-16	Ltp family lipoprotein	N/A
eggNOG-mapper	UHGV-0174973_61	246196.MSMEI_1228	82.0	1.55e-16	Host cell surface-exposed lipoprotein	N/A
Pfam	UHGV-0174973_61	PF13240	N/A	N/A	zinc-ribbon domain	zinc_ribbon_2
Pfam	UHGV-0174973_61	PF07553	N/A	N/A	Host cell surface-exposed lipoprotein	Lipoprotein_Ltp
structural_annotation	UHGV-0174973_61	PF02631,MF_01114,NF001062,COG2137	N/A	N/A	N/A	N/A
UniRef90	UHGV-0174973_65	UniRef90_A0A2A7B6N3	200.0	0	HTH cro/C1-type domain-containing protein	N/A
Pfam	UHGV-0174973_65	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0174973_65	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0174973_65	PF13560,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0174973_66	K14059	199.5	0	int; integrase	N/A
PHROG	UHGV-0174973_66	phrog_1	174.7	0	integrase	integration and excision
UniRef90	UHGV-0174973_66	UniRef90_A0A367GI93	243.0	0	Tyr recombinase domain-containing protein	N/A
eggNOG-mapper	UHGV-0174973_66	1507.HMPREF0262_00307	189.0	0	Phage integrase family	N/A
Pfam	UHGV-0174973_66	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0174973_66	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0174973_66	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0174973	Yes	40,227	54	100	1