vOTU vOTU-079332

vOTU: vOTU-079332

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-079332
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00005 → vSUBFAM-00951 → vGENUS-03026 → vSUBGEN-16549 → vOTU-079332
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → Scatomorpha
Host range breadth	Genus
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1978502
Biosample ID	SAMN03922519
Genome length (bp)	32,864 bps
CheckV completeness	93.58% (High-quality)
CDS count	42
CDS density	95.45%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → Scatomorpha	Total connections	26	Host agreement	92.31
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → Scatomorpha	Total connections	12	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 93.58)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-1978502_1	K14059	203.3	0	int; integrase	N/A
PHROG	UHGV-1978502_1	phrog_1	175.6	0	integrase	integration and excision
UniRef90	UHGV-1978502_1	UniRef90_A0A3D1VH24	411.0	0	Site-specific integrase	N/A
eggNOG-mapper	UHGV-1978502_1	1297617.JPJD01000022_gene1664	248.0	0	Phage integrase, N-terminal SAM-like domain	N/A
Pfam	UHGV-1978502_1	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1978502_1	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1978502_1	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
KOfam	UHGV-1978502_2	K19370	41.6	0.00000000001	DNAJC22; DnaJ homolog subfamily C member 22	N/A
PHROG	UHGV-1978502_2	phrog_10292	73.5	1.6e-24	N/A	unknown function
UniRef90	UHGV-1978502_2	UniRef90_UPI0009E322BA	105.0	4.81e-26	NINE protein	N/A
eggNOG-mapper	UHGV-1978502_2	537013.CLOSTMETH_02269	100.0	4.58e-25	TM2 domain	N/A
Pfam	UHGV-1978502_2	PF13240	N/A	N/A	zinc-ribbon domain	zinc_ribbon_2
Pfam	UHGV-1978502_2	PF05154	N/A	N/A	TM2 domain	TM2
COG	UHGV-1978502_2	COG2314	N/A	N/A	N/A	N/A
UniRef90	UHGV-1978502_4	UniRef90_UPI00195679C6	94.7	6.07e-23	helix-turn-helix domain-containing protein	N/A
Pfam	UHGV-1978502_4	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-1978502_4	PF13443,NF041951,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-1978502_5	K22300	44.4	0.0000000000037	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
UniRef90	UHGV-1978502_5	UniRef90_UPI00195CC469	62.8	0.0000000000295	helix-turn-helix domain-containing protein	N/A
Pfam	UHGV-1978502_5	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1978502_5	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
PHROG	UHGV-1978502_6	phrog_6499	104.7	5.1e-31	transcriptional regulator	transcription regulation
UniRef90	UHGV-1978502_6	UniRef90_A0A3D1VA62	137.0	1.61e-38	Transcriptional regulator	N/A
eggNOG-mapper	UHGV-1978502_6	1415774.U728_1274	96.3	2.73e-23	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-1978502_6	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1978502_6	COG1813	N/A	N/A	Archaeal ribosome-binding protein aMBF1, putative translation factor, contains Zn-ribbon and HTH domains	N/A
structural_annotation	UHGV-1978502_6	PF01381,MF_00535,NF040522,COG1476	N/A	N/A	N/A	N/A
Pfam	UHGV-1978502_7	PF12728	N/A	N/A	Helix-turn-helix domain	HTH_17
NCBIFam	UHGV-1978502_7	TIGR01764.1	N/A	N/A	excisionase family DNA-binding protein	N/A
COG	UHGV-1978502_7	COG1910	N/A	N/A	Periplasmic molybdate-binding protein/domain	N/A
structural_annotation	UHGV-1978502_7	PF12728,MF_01155,TIGR01764,COG3311	N/A	N/A	N/A	N/A
PHROG	UHGV-1978502_8	phrog_270	122.5	3.9e-36	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1978502_8	UniRef90_UPI001F170B82	176.0	0	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1978502_8	742738.HMPREF9460_00851	140.0	9.35e-38	Helix-turn-helix domain	N/A
Pfam	UHGV-1978502_8	PF13730	N/A	N/A	Helix-turn-helix domain	HTH_36
COG	UHGV-1978502_8	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-1978502_8	PF04182,NF040939,COG3355	N/A	N/A	N/A	N/A
KOfam	UHGV-1978502_9	K02314	287.5	0	dnaB; replicative DNA helicase [EC:5.6.2.3]	N/A
PHROG	UHGV-1978502_9	phrog_19	248.4	0	DnaB-like replicative helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1978502_9	UniRef90_A0A3D1V9Y4	347.0	0	DNA helicase	N/A
eggNOG-mapper	UHGV-1978502_9	1007096.BAGW01000033_gene1616	275.0	0	DnaB-like helicase N terminal domain	N/A
Pfam	UHGV-1978502_9	PF00772	N/A	N/A	DnaB-like helicase N terminal domain	DnaB
Pfam	UHGV-1978502_9	PF03796	N/A	N/A	DnaB-like helicase C terminal domain	DnaB_C
COG	UHGV-1978502_9	COG0305	N/A	N/A	Replicative DNA helicase	N/A
structural_annotation	UHGV-1978502_9	PF03796,PF00772,MF_04155,TIGR00665,COG0305	N/A	N/A	N/A	N/A
KOfam	UHGV-1978502_10	K03496	214.8	0	parA, soj; chromosome partitioning protein	N/A
PHROG	UHGV-1978502_10	phrog_164	183.0	0	ParA-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1978502_10	UniRef90_A0A2N2CMQ6	293.0	0	AAA_31 domain-containing protein	N/A
eggNOG-mapper	UHGV-1978502_10	742738.HMPREF9460_00854	218.0	0	4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family	N/A
Pfam	UHGV-1978502_10	PF13614	N/A	N/A	AAA domain	AAA_31
COG	UHGV-1978502_10	COG1192	N/A	N/A	ParA-like ATPase involved in chromosome/plasmid partitioning or cellulose biosynthesis protein BcsQ	N/A
structural_annotation	UHGV-1978502_10	PF13614,MF_00533,TIGR03453,COG1192	N/A	N/A	N/A	N/A
KOfam	UHGV-1978502_11	K03497	102.7	6.8e-30	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	N/A
PHROG	UHGV-1978502_11	phrog_27290	208.9	0	N/A	unknown function
UniRef90	UHGV-1978502_11	UniRef90_A0A3D1VH09	184.0	0	ParB domain-containing protein	N/A
eggNOG-mapper	UHGV-1978502_11	742738.HMPREF9460_00856	150.0	2.63e-38	ParB-like nuclease domain	N/A
Pfam	UHGV-1978502_11	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
COG	UHGV-1978502_11	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-1978502_13	PF01402,COG4710	N/A	N/A	N/A	N/A
KOfam	UHGV-1978502_14	K00558	235.1	0	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-1978502_14	phrog_116	269.9	0	DNA methyltransferase	other
UniRef90	UHGV-1978502_14	UniRef90_A0A4D7AUH2	798.0	0	DNA (cytosine-5-)-methyltransferase	N/A
eggNOG-mapper	UHGV-1978502_14	1121334.KB911073_gene1852	656.0	0	Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family	N/A
PADLOC	UHGV-1978502_14	MTase_II_00020	104.2	2.9e-37	Type II methyltransferase	RM
Pfam	UHGV-1978502_14	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
COG	UHGV-1978502_14	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-1978502_14	PF00145,MF_00351,TIGR00675,COG0270	N/A	N/A	N/A	N/A
PHROG	UHGV-1978502_18	phrog_3584	144.9	5.29691e-43	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1978502_18	1203606.HMPREF1526_00985	179.0	0	N/A	N/A
structural_annotation	UHGV-1978502_18	PF01446,NF041486	N/A	N/A	N/A	N/A
Pfam	UHGV-1978502_19	PF14205	N/A	N/A	Cysteine-rich KTR	Cys_rich_KTR
structural_annotation	UHGV-1978502_19	PF14205,NF041070	N/A	N/A	N/A	N/A
PHROG	UHGV-1978502_20	phrog_119	59.4	5.4e-17	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1978502_20	UniRef90_A0A316P1K8	117.0	1.87e-32	HNH endonuclease	N/A
eggNOG-mapper	UHGV-1978502_20	755731.Clo1100_0542	108.0	1.54e-29	HNH nucleases	N/A
COG	UHGV-1978502_20	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-1978502_20	TIGR02646	N/A	N/A	N/A	N/A
PHROG	UHGV-1978502_21	phrog_9	261.1	0	terminase large subunit	head and packaging
UniRef90	UHGV-1978502_21	UniRef90_A0A3D1VAR5	731.0	0	Terminase	N/A
eggNOG-mapper	UHGV-1978502_21	1226322.HMPREF1545_00113	682.0	0	Phage Terminase	N/A
Pfam	UHGV-1978502_21	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
Pfam	UHGV-1978502_21	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
COG	UHGV-1978502_21	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-1978502_21	PF03354,PF20441,PF05119,MF_04146,TIGR01547,TIGR01558,COG4626,COG3747	N/A	N/A	N/A	N/A
PHROG	UHGV-1978502_22	phrog_12	152.2	2.8026e-45	portal protein	head and packaging
UniRef90	UHGV-1978502_22	UniRef90_A0A3D1VH02	426.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-1978502_22	1121423.JONT01000042_gene1421	415.0	0	Phage portal protein, HK97 family	N/A
Pfam	UHGV-1978502_22	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-1978502_22	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-1978502_22	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-1978502_22	PF04860,MF_04120,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-1978502_23	K06904	139.9	2.29995e-41	N/A	N/A
PHROG	UHGV-1978502_23	phrog_80	168.6	0	head maturation protease	head and packaging
UniRef90	UHGV-1978502_23	UniRef90_A0A3D1VA27	240.0	0	HK97 family phage prohead protease	N/A
eggNOG-mapper	UHGV-1978502_23	1235798.C817_04584	209.0	0	Phage prohead protease, HK97 family	N/A
Pfam	UHGV-1978502_23	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
NCBIFam	UHGV-1978502_23	TIGR01543.1	N/A	N/A	HK97 family phage prohead protease	N/A
COG	UHGV-1978502_23	COG3740	N/A	N/A	Phage head maturation protease	N/A
structural_annotation	UHGV-1978502_23	PF04586,TIGR01543,COG3740	N/A	N/A	N/A	N/A
PHROG	UHGV-1978502_24	phrog_10	161.3	0	major head protein	head and packaging
UniRef90	UHGV-1978502_24	UniRef90_A0A3D1VAZ0	396.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-1978502_24	642492.Clole_0744	392.0	0	phage major capsid protein, HK97 family	N/A
Pfam	UHGV-1978502_24	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-1978502_24	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-1978502_24	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-1978502_24	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1978502_25	phrog_2550	44.2	0.0000000000022	N/A	unknown function
UniRef90	UHGV-1978502_25	UniRef90_UPI001E35E63D	51.6	0.00000162	phage head-tail connector protein	N/A
eggNOG-mapper	UHGV-1978502_25	33035.JPJF01000039_gene274	54.7	0.00000002	N/A	N/A
structural_annotation	UHGV-1978502_25	PF05135,TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-1978502_26	phrog_19734	46.5	0.00000000000072	N/A	unknown function
UniRef90	UHGV-1978502_26	UniRef90_A0A3E5GR03	58.2	0.0000000125	Head-tail adaptor protein	N/A
eggNOG-mapper	UHGV-1978502_26	33035.JPJF01000039_gene275	57.8	0.00000000265	N/A	N/A
structural_annotation	UHGV-1978502_26	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1978502_27	1487921.DP68_11350	59.7	0.000000000407	N/A	N/A
structural_annotation	UHGV-1978502_27	PF05657	N/A	N/A	N/A	N/A
PHROG	UHGV-1978502_28	phrog_5	40.1	0.00000000008	tail completion or Neck1 protein	connector
eggNOG-mapper	UHGV-1978502_28	349161.Dred_2601	54.7	0.000000192	Phage protein, HK97 gp10 family	N/A
Pfam	UHGV-1978502_28	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-1978502_28	TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-1978502_29	phrog_88	68.0	1.5e-19	major tail protein	tail
UniRef90	UHGV-1978502_29	UniRef90_S0FUN2	98.2	3.38e-22	Phage major tail protein, phi13 family	N/A
eggNOG-mapper	UHGV-1978502_29	1195236.CTER_5106	98.2	5.67e-23	phage major tail protein, phi13 family	N/A
NCBIFam	UHGV-1978502_29	TIGR01603.1	N/A	N/A	major tail protein	N/A
COG	UHGV-1978502_29	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1978502_29	PF04630,TIGR01603,COG3498	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1978502_30	PF11836	N/A	N/A	N/A	N/A
PHROG	UHGV-1978502_31	phrog_10613	116.2	4e-34	tail length tape measure protein	tail
UniRef90	UHGV-1978502_31	UniRef90_A0A2Z4I560	253.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-1978502_31	498761.HM1_2969	239.0	0	nuclear chromosome segregation	N/A
COG	UHGV-1978502_31	COG5280	N/A	N/A	Phage-related minor tail protein	N/A
structural_annotation	UHGV-1978502_31	TIGR01760,COG5280	N/A	N/A	N/A	N/A
UniRef90	UHGV-1978502_32	UniRef90_A0A3D0W045	244.0	0	Fibronectin type-III domain-containing protein	N/A
eggNOG-mapper	UHGV-1978502_32	1195236.CTER_5103	103.0	4.72e-20	N/A	N/A
structural_annotation	UHGV-1978502_32	PF02010,PF06848,PF19266,MF_04116,NF033679,NF032891,TIGR01633,TIGR04488,COG3401,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1978502_33	phrog_26795	146.5	1.30321e-43	N/A	unknown function
UniRef90	UHGV-1978502_33	UniRef90_A0A5J6T4K8	149.0	5.32e-38	Minor tail protein	N/A
eggNOG-mapper	UHGV-1978502_33	1195236.CTER_5102	145.0	1.13e-37	N/A	N/A
structural_annotation	UHGV-1978502_33	PF14594,NF033848,COG4379	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1978502_34	PF18614,MF_00085,NF003076,COG0231	N/A	N/A	N/A	N/A
KOfam	UHGV-1978502_35	K16628	191.9	0	COL7A; collagen type VII alpha	N/A
PHROG	UHGV-1978502_35	phrog_3420	116.1	5.60001e-41	N/A	unknown function
eggNOG-mapper	UHGV-1978502_35	649747.HMPREF0083_00644	85.1	0.0000000000000135	N/A	N/A
Pfam	UHGV-1978502_35	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
structural_annotation	UHGV-1978502_36	PF10618,MF_01370	N/A	N/A	N/A	N/A
PHROG	UHGV-1978502_38	phrog_13126	352.1	0	beta-1,4-glycosyltransferase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1978502_38	UniRef90_A0A8J6J245	406.0	0	Glycosyltransferase	N/A
eggNOG-mapper	UHGV-1978502_38	742738.HMPREF9460_00302	406.0	0	transferase activity, transferring glycosyl groups	N/A
Pfam	UHGV-1978502_38	PF00535	N/A	N/A	Glycosyl transferase family 2	Glycos_transf_2
Pfam	UHGV-1978502_38	PF14559	N/A	N/A	Tetratricopeptide repeat	TPR_19
Pfam	UHGV-1978502_38	PF07719	N/A	N/A	Tetratricopeptide repeat	TPR_2
COG	UHGV-1978502_38	COG0463	N/A	N/A	Glycosyltransferase involved in cell wall bisynthesis	N/A
structural_annotation	UHGV-1978502_38	PF18768,PF13641,MF_00994,MF_00316,TIGR04195,COG0457,COG0463	N/A	N/A	N/A	N/A
PHROG	UHGV-1978502_39	phrog_19111	86.2	3.2e-25	N/A	unknown function
eggNOG-mapper	UHGV-1978502_39	756499.Desde_3162	62.4	0.00000000811	nuclear chromosome segregation	N/A
COG	UHGV-1978502_39	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
KOfam	UHGV-1978502_40	K01447	44.3	0.0000000000028	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-1978502_40	phrog_15001	127.9	3.3e-39	endolysin	lysis
UniRef90	UHGV-1978502_40	UniRef90_A0A357B062	243.0	0	Amidase	N/A
eggNOG-mapper	UHGV-1978502_40	1216932.CM240_0631	236.0	0	Ami_2	N/A
Pfam	UHGV-1978502_40	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
COG	UHGV-1978502_40	COG1388	N/A	N/A	LysM repeat	N/A
structural_annotation	UHGV-1978502_40	PF01510,MF_04111,COG5632	N/A	N/A	N/A	N/A
PHROG	UHGV-1978502_41	phrog_1129	66.4	3.1e-19	holin	lysis
UniRef90	UHGV-1978502_41	UniRef90_A0A3D4QXE9	129.0	1.63e-37	Enolase	N/A
eggNOG-mapper	UHGV-1978502_41	742740.HMPREF9474_03522	110.0	8.06e-31	N/A	N/A
Pfam	UHGV-1978502_41	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-1978502_41	PF06946	N/A	N/A	N/A	N/A
PHROG	UHGV-1978502_42	phrog_1009	49.3	0.000000000000074	N/A	unknown function

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1978502	Yes	32,864	58	94	1