vOTU vOTU-079351

vOTU: vOTU-079351

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-079351
Number of genomes	1
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae → UBA1417 → UBA1417 sp003531055
Taxonomy (UHGV)	vFAM-00005 → vSUBFAM-00598 → vGENUS-00499 → vSUBGEN-00924 → vOTU-079351
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae → UBA1417 → UBA1417 sp003531055
Host range breadth	Species
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1399282
Biosample ID	SAMEA3665202
Genome length (bp)	32,632 bps
CheckV completeness	99.90% (High-quality)
CDS count	53
CDS density	89.57%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae → UBA1417 → UBA1417 sp003531055	Total connections	1294	Host agreement	97.37
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae → UBA1417 → UBA1417 sp003531055	Total connections	5	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 99.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1399282_1	phrog_27197	44.3	0.0000000000029	N/A	unknown function
COG	UHGV-1399282_1	COG5164	N/A	N/A	Transcription elongation factor SPT5	N/A
PHROG	UHGV-1399282_3	phrog_3584	270.1	0	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1399282_3	536233.CLO_3655	240.0	0	N/A	N/A
structural_annotation	UHGV-1399282_3	PF21578	N/A	N/A	N/A	N/A
PHROG	UHGV-1399282_4	phrog_824	147.0	5.04467e-44	N/A	unknown function
UniRef90	UHGV-1399282_4	UniRef90_A0A658JYB5	183.0	0	VRR-NUC domain-containing protein	N/A
eggNOG-mapper	UHGV-1399282_4	768710.DesyoDRAFT_5233	134.0	9.79e-39	VRR-NUC domain	N/A
Pfam	UHGV-1399282_4	PF08774	N/A	N/A	VRR-NUC domain	VRR_NUC
KOfam	UHGV-1399282_5	K03111	108.4	1.1e-31	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1399282_5	phrog_44	116.9	2e-34	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1399282_5	UniRef90_A0A352RPR0	117.0	2.18e-31	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1399282_5	1105031.HMPREF1141_2832	109.0	3.67e-29	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-1399282_5	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1399282_5	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1399282_5	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1399282_5	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1399282_5	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-1399282_6	phrog_140	68.0	1.7e-19	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1399282_6	UniRef90_A0A3D5P905	76.6	0.00000000000000357	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-1399282_6	411459.RUMOBE_01038	50.8	0.00000466	COG COG4570 Holliday junction resolvase	N/A
Pfam	UHGV-1399282_6	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-1399282_6	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-1399282_6	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
PHROG	UHGV-1399282_12	phrog_111	158.5	0	DNA methyltransferase	other
UniRef90	UHGV-1399282_12	UniRef90_A0A1C6GCR8	265.0	0	Phage N-6-adenine-methyltransferase	N/A
eggNOG-mapper	UHGV-1399282_12	445972.ANACOL_03344	216.0	0	DNA N-6-adenine-methyltransferase (Dam)	N/A
PADLOC	UHGV-1399282_12	oMTase_00015	176.0	0	orphan methyltransferase	RM
Pfam	UHGV-1399282_12	PF05869	N/A	N/A	DNA N-6-adenine-methyltransferase (Dam)	Dam
structural_annotation	UHGV-1399282_12	PF05869,TIGR01712,COG0338	N/A	N/A	N/A	N/A
PHROG	UHGV-1399282_15	phrog_757	219.3	0	DNA methyltransferase	other
UniRef90	UHGV-1399282_15	UniRef90_A0A7J2REI9	245.0	0	DNA cytosine methyltransferase	N/A
eggNOG-mapper	UHGV-1399282_15	1235790.C805_00032	285.0	0	DNA (cytosine-5-)-methyltransferase activity	N/A
COG	UHGV-1399282_15	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-1399282_15	PF00145,MF_01872,TIGR00675,COG0270	N/A	N/A	N/A	N/A
UniRef90	UHGV-1399282_16	UniRef90_A0A3A9EZN6	112.0	2.06e-29	Sigma-70 family RNA polymerase sigma factor	N/A
eggNOG-mapper	UHGV-1399282_16	1111134.HMPREF1253_1193	61.6	0.000000000261	N/A	N/A
structural_annotation	UHGV-1399282_16	PF07374	N/A	N/A	N/A	N/A
PHROG	UHGV-1399282_17	phrog_21498	238.3	0	N/A	unknown function
UniRef90	UHGV-1399282_17	UniRef90_UPI001E4A965D	184.0	0	chromosome partitioning protein ParB	N/A
eggNOG-mapper	UHGV-1399282_17	78346.BRUM_0376	209.0	0	DNA binding	N/A
COG	UHGV-1399282_17	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
KOfam	UHGV-1399282_18	K07451	57.0	3.8e-16	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	N/A
PHROG	UHGV-1399282_18	phrog_119	88.9	5.9e-26	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1399282_18	UniRef90_A0A2V2GQ57	131.0	2.99e-38	HNH endonuclease	N/A
eggNOG-mapper	UHGV-1399282_18	1226322.HMPREF1545_00111	114.0	2.57e-32	HNH nucleases	N/A
Pfam	UHGV-1399282_18	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-1399282_18	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-1399282_18	PF05766,NF008448	N/A	N/A	N/A	N/A
PHROG	UHGV-1399282_19	phrog_361	69.7	4.7e-20	terminase small subunit	head and packaging
UniRef90	UHGV-1399282_19	UniRef90_A0A1C6H6I9	199.0	0	Phage terminase, small subunit	N/A
Pfam	UHGV-1399282_19	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
COG	UHGV-1399282_19	COG3747	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-1399282_19	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
PHROG	UHGV-1399282_20	phrog_9	296.9	0	terminase large subunit	head and packaging
UniRef90	UHGV-1399282_20	UniRef90_A0A0D8IV16	1037.0	0	Terminase	N/A
eggNOG-mapper	UHGV-1399282_20	1226322.HMPREF1545_00113	868.0	0	Phage Terminase	N/A
Pfam	UHGV-1399282_20	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-1399282_20	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-1399282_20	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-1399282_20	PF20441,PF03354,MF_04013,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-1399282_21	phrog_12	182.2	0	portal protein	head and packaging
UniRef90	UHGV-1399282_21	UniRef90_A0A0D8IVL0	647.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-1399282_21	1226322.HMPREF1545_00114	516.0	0	Phage portal protein, HK97 family	N/A
Pfam	UHGV-1399282_21	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-1399282_21	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-1399282_21	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-1399282_21	PF04860,MF_04120,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-1399282_22	K06904	156.5	0	N/A	N/A
PHROG	UHGV-1399282_22	phrog_80	180.3	0	head maturation protease	head and packaging
UniRef90	UHGV-1399282_22	UniRef90_A0A1C6H687	283.0	0	Phage prohead protease, HK97 family	N/A
eggNOG-mapper	UHGV-1399282_22	1226322.HMPREF1545_00115	278.0	0	Phage prohead protease, HK97 family	N/A
Pfam	UHGV-1399282_22	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
NCBIFam	UHGV-1399282_22	TIGR01543.1	N/A	N/A	HK97 family phage prohead protease	N/A
COG	UHGV-1399282_22	COG3740	N/A	N/A	Phage head maturation protease	N/A
structural_annotation	UHGV-1399282_22	PF04586,TIGR01543,COG3740	N/A	N/A	N/A	N/A
PHROG	UHGV-1399282_23	phrog_10	203.5	0	major head protein	head and packaging
UniRef90	UHGV-1399282_23	UniRef90_UPI000679B959	810.0	0	phage major capsid protein	N/A
eggNOG-mapper	UHGV-1399282_23	1226322.HMPREF1545_00116	626.0	0	phage major capsid protein, HK97 family	N/A
Pfam	UHGV-1399282_23	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-1399282_23	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-1399282_23	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-1399282_23	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1399282_24	phrog_2550	85.3	3.4e-25	N/A	unknown function
UniRef90	UHGV-1399282_24	UniRef90_UPI001E35E63D	79.3	1.97e-17	phage head-tail connector protein	N/A
eggNOG-mapper	UHGV-1399282_24	1226322.HMPREF1545_00117	121.0	6.8e-35	N/A	N/A
structural_annotation	UHGV-1399282_24	PF05135,TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-1399282_25	phrog_1951	78.7	5.4e-23	head-tail adaptor	connector
UniRef90	UHGV-1399282_25	UniRef90_A0A2V2GSS5	112.0	6.71e-30	Phage head-tail adapter protein	N/A
eggNOG-mapper	UHGV-1399282_25	411471.SUBVAR_05854	74.7	5.76e-16	N/A	N/A
NCBIFam	UHGV-1399282_25	TIGR01563.1	N/A	N/A	phage head closure protein	N/A
structural_annotation	UHGV-1399282_25	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1399282_26	phrog_5	52.5	0.000000000000013	tail completion or Neck1 protein	connector
UniRef90	UHGV-1399282_26	UniRef90_A0A8J6PH82	116.0	6.05e-31	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-1399282_26	411471.SUBVAR_05855	145.0	3.13891e-43	N/A	N/A
Pfam	UHGV-1399282_26	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-1399282_26	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-1399282_27	phrog_78	48.7	0.00000000000015	tail terminator	connector
UniRef90	UHGV-1399282_27	UniRef90_U2SBX3	130.0	3.37e-37	HTH merR-type domain-containing protein	N/A
eggNOG-mapper	UHGV-1399282_27	411471.SUBVAR_05856	137.0	5.07999e-41	N/A	N/A
structural_annotation	UHGV-1399282_27	PF20765	N/A	N/A	N/A	N/A
PHROG	UHGV-1399282_28	phrog_88	141.3	5.59959e-42	major tail protein	tail
UniRef90	UHGV-1399282_28	UniRef90_D1PND6	264.0	0	Phage major tail protein, phi13 family	N/A
eggNOG-mapper	UHGV-1399282_28	411471.SUBVAR_05857	264.0	0	phage major tail protein, phi13 family	N/A
NCBIFam	UHGV-1399282_28	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-1399282_28	PF06488,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-1399282_29	phrog_709	119.4	1.8e-35	N/A	unknown function
eggNOG-mapper	UHGV-1399282_29	411471.SUBVAR_05858	165.0	0	N/A	N/A
structural_annotation	UHGV-1399282_29	PF11836	N/A	N/A	N/A	N/A
PHROG	UHGV-1399282_30	phrog_3033	54.3	0.0000000000000021	N/A	unknown function
eggNOG-mapper	UHGV-1399282_30	1280671.AUJH01000012_gene3142	55.1	0.000000001	N/A	N/A
PHROG	UHGV-1399282_31	phrog_5755	175.5	0	tail length tape measure protein	tail
UniRef90	UHGV-1399282_31	UniRef90_A0A1C6H5M9	416.0	0	Phage-related minor tail protein	N/A
eggNOG-mapper	UHGV-1399282_31	33035.JPJF01000023_gene3232	234.0	0	phage tail tape measure protein	N/A
COG	UHGV-1399282_31	COG5412	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-1399282_31	PF10145,TIGR01760,COG5280	N/A	N/A	N/A	N/A
PHROG	UHGV-1399282_32	phrog_33	71.0	3e-20	distal tail protein Dit	tail
UniRef90	UHGV-1399282_32	UniRef90_A0A1C6H6D2	244.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-1399282_32	1123263.AUKY01000068_gene490	109.0	1.77e-26	tail component	N/A
COG	UHGV-1399282_32	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-1399282_32	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-1399282_33	phrog_1067	344.2	0	minor head protein	head and packaging
UniRef90	UHGV-1399282_33	UniRef90_UPI001968120D	561.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-1399282_33	1123263.AUKY01000068_gene489	369.0	0	Phage minor structural protein	N/A
Pfam	UHGV-1399282_33	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-1399282_33	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-1399282_33	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-1399282_33	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1399282_34	1321782.HMPREF1986_02279	267.0	0	COG NOG18825 non supervised orthologous group	N/A
structural_annotation	UHGV-1399282_34	PF10651,PF19789,COG2372	N/A	N/A	N/A	N/A
PHROG	UHGV-1399282_35	phrog_1863	68.7	5e-20	N/A	unknown function
eggNOG-mapper	UHGV-1399282_35	665956.HMPREF1032_03922	108.0	9.02e-30	N/A	N/A
PHROG	UHGV-1399282_36	phrog_443	54.3	0.0000000000000038	holin	lysis
UniRef90	UHGV-1399282_36	UniRef90_UPI001C3BFF52	110.0	3.59e-30	Holin	N/A
eggNOG-mapper	UHGV-1399282_36	1235800.C819_01425	91.7	1.93e-23	Putative lactococcus lactis phage r1t holin	N/A
Pfam	UHGV-1399282_36	PF16945	N/A	N/A	Putative lactococcus lactis phage r1t holin	Phage_r1t_holin
structural_annotation	UHGV-1399282_36	PF16945	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1399282_37	PF16640	N/A	N/A	N/A	N/A
KOfam	UHGV-1399282_38	K01447	80.6	2.8e-23	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-1399282_38	phrog_3088	200.7	0	amidase	lysis
UniRef90	UHGV-1399282_38	UniRef90_A0A3D3Y0W1	313.0	0	N-acetylmuramoyl-L-alanine amidase domain-containing protein	N/A
eggNOG-mapper	UHGV-1399282_38	428125.CLOLEP_01782	225.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-1399282_38	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
COG	UHGV-1399282_38	COG5632	N/A	N/A	N-acetylmuramoyl-L-alanine amidase CwlA	N/A
structural_annotation	UHGV-1399282_38	PF01510,MF_04111,NF008758,COG5632	N/A	N/A	N/A	N/A
KOfam	UHGV-1399282_41	K07729	41.1	0.000000000036	K07729; putative transcriptional regulator	N/A
UniRef90	UHGV-1399282_41	UniRef90_A0A355JD13	50.1	0.00000164	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-1399282_41	471855.Shel_02750	58.9	0.00000000124	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-1399282_41	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1399282_41	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1399282_41	PF01381,NF041951,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-1399282_43	K14059	180.5	0	int; integrase	N/A
PHROG	UHGV-1399282_43	phrog_1	185.2	0	integrase	integration and excision
UniRef90	UHGV-1399282_43	UniRef90_UPI00164B8B01	312.0	0	site-specific integrase	N/A
eggNOG-mapper	UHGV-1399282_43	861454.HMPREF9099_00328	282.0	0	Phage integrase family	N/A
Pfam	UHGV-1399282_43	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1399282_43	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1399282_43	PF00589,PF12167,MF_02055,NF040815,COG4974	N/A	N/A	N/A	N/A
Pfam	UHGV-1399282_44	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-1399282_44	PF13560,NF041951,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-1399282_45	phrog_17572	112.9	1.2e-33	N/A	unknown function
UniRef90	UHGV-1399282_45	UniRef90_A0A0H4LIJ8	102.0	3.15e-26	Prophage ps2 protein 03	N/A
eggNOG-mapper	UHGV-1399282_45	1499683.CCFF01000017_gene3026	113.0	1.32e-31	N/A	N/A
AcrCatalog	UHGV-1399282_45	cluster_25152	114.0	1.47e-36	NA	N/A
structural_annotation	UHGV-1399282_45	PF13783,MF_01122	N/A	N/A	N/A	N/A
KOfam	UHGV-1399282_47	K22300	48.0	0.00000000000027	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-1399282_47	phrog_2967	47.9	0.00000000000026	transcriptional regulator	transcription regulation
UniRef90	UHGV-1399282_47	UniRef90_A0A1Q6RKG1	103.0	4.45e-26	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-1399282_47	748224.HMPREF9436_01444	86.7	6.65e-20	N/A	N/A
Pfam	UHGV-1399282_47	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1399282_47	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1399282_47	PF01381,MF_00535,NF007257,COG1396	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1399282_51	PF13560,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-1399282_53	phrog_4433	76.2	3.1e-22	N/A	unknown function
eggNOG-mapper	UHGV-1399282_53	269482.Bcep1808_1157	68.6	0.000000000013	Flagellar Assembly Protein A	N/A
COG	UHGV-1399282_53	COG5164	N/A	N/A	Transcription elongation factor SPT5	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1399282	Yes	32,632	52	100	1