vOTU vOTU-079360

vOTU: vOTU-079360

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-079360
Number of genomes	5
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00003 → vSUBFAM-00799 → vGENUS-03811 → vSUBGEN-13429 → vOTU-079360
Host lineage	Bacteria → Firmicutes → Bacilli → Erysipelotrichales → Erysipelotrichaceae → Clostridium_AQ → Clostridium_AQ innocuum
Host range breadth	Species
Lifestyle	temperate (evidence: geNomad)

Representative genome
Genome ID	UHGV-0116515
Biosample ID	SAMEA4378315
Genome length (bp)	38,141 bps
CheckV completeness	93.04% (High-quality)
CDS count	61
CDS density	94.32%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes → Bacilli → Erysipelotrichales → Erysipelotrichaceae → Clostridium_AQ → Clostridium_AQ innocuum	Total connections	62	Host agreement	100
PHIST-predicted host lineage	Bacteria → Firmicutes → Bacilli → Erysipelotrichales → Erysipelotrichaceae → Clostridium_AQ → Clostridium_AQ innocuum	Total connections	59	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 93.04)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0116515_1	K14059	220.0	0	int; integrase	N/A
PHROG	UHGV-0116515_1	phrog_1	217.8	0	integrase	integration and excision
UniRef90	UHGV-0116515_1	UniRef90_A0A223MI02	729.0	0	Site-specific integrase	N/A
eggNOG-mapper	UHGV-0116515_1	908340.HMPREF9406_3938	731.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0116515_1	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-0116515_1	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0116515_1	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0116515_1	PF00589,MF_01808,TIGR02224,COG4974	N/A	N/A	N/A	N/A
KOfam	UHGV-0116515_2	K07727	92.7	5.4e-27	K07727; putative transcriptional regulator	N/A
PHROG	UHGV-0116515_2	phrog_38620	67.1	2.3e-19	transcriptional regulator	transcription regulation
UniRef90	UHGV-0116515_2	UniRef90_A0A223MHR8	409.0	0	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0116515_2	649747.HMPREF0083_00501	81.6	1.02e-16	Transcriptional regulator	N/A
Pfam	UHGV-0116515_2	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
COG	UHGV-0116515_2	COG3655	N/A	N/A	DNA-binding transcriptional regulator, XRE family	N/A
structural_annotation	UHGV-0116515_2	PF13443,NF000090,COG3655	N/A	N/A	N/A	N/A
KOfam	UHGV-0116515_3	K07727	64.4	3e-18	K07727; putative transcriptional regulator	N/A
PHROG	UHGV-0116515_3	phrog_38620	57.6	2.6e-16	transcriptional regulator	transcription regulation
UniRef90	UHGV-0116515_3	UniRef90_R6UYM9	134.0	5.15e-40	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0116515_3	1177154.Y5S_01825	53.1	0.000000017	transcriptional regulator	N/A
Pfam	UHGV-0116515_3	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
COG	UHGV-0116515_3	COG3655	N/A	N/A	DNA-binding transcriptional regulator, XRE family	N/A
structural_annotation	UHGV-0116515_3	PF13443,NF041951,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-0116515_5	phrog_1726	186.0	0	anti-repressor	transcription regulation
UniRef90	UHGV-0116515_5	UniRef90_UPI001E2C4485	506.0	0	ORF6N domain-containing protein	N/A
eggNOG-mapper	UHGV-0116515_5	552396.HMPREF0863_00753	165.0	0	AntA/AntB antirepressor	N/A
Pfam	UHGV-0116515_5	PF10543	N/A	N/A	ORF6N domain	ORF6N
COG	UHGV-0116515_5	COG3561	N/A	N/A	Phage anti-repressor protein Ant	N/A
structural_annotation	UHGV-0116515_5	PF10543,PF03374,TIGR02681,COG3646	N/A	N/A	N/A	N/A
UniRef90	UHGV-0116515_6	UniRef90_A0A898FN54	102.0	4.19e-27	N/A	N/A
Pfam	UHGV-0116515_6	PF05339	N/A	N/A	N/A	DUF739
COG	UHGV-0116515_6	COG3655	N/A	N/A	DNA-binding transcriptional regulator, XRE family	N/A
structural_annotation	UHGV-0116515_6	PF05339,NF002773,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0116515_7	K22300	49.9	1.4e-18	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0116515_7	phrog_8	54.7	5e-25	transcriptional regulator	transcription regulation
UniRef90	UHGV-0116515_7	UniRef90_H1BHQ3	117.0	1.59e-29	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0116515_7	552396.HMPREF0863_00300	108.0	3.06e-27	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-0116515_7	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
Pfam	UHGV-0116515_7	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
COG	UHGV-0116515_7	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
UniRef90	UHGV-0116515_8	UniRef90_F2JK84	92.8	1.61e-23	Helix-turn-helix domain protein	N/A
eggNOG-mapper	UHGV-0116515_8	642492.Clole_2800	92.8	2.7e-24	N/A	N/A
structural_annotation	UHGV-0116515_8	PF05339,NF041951,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-0116515_9	phrog_524	46.8	0.0000000000007	anti-repressor Ant	transcription regulation
UniRef90	UHGV-0116515_9	UniRef90_R6URP2	348.0	0	P22_AR_N domain-containing protein	N/A
eggNOG-mapper	UHGV-0116515_9	397291.C804_01063	126.0	7.99e-33	P22_AR N-terminal domain	N/A
Pfam	UHGV-0116515_9	PF10547	N/A	N/A	P22_AR N-terminal domain	P22_AR_N
COG	UHGV-0116515_9	COG3646	N/A	N/A	Phage regulatory protein Rha	N/A
structural_annotation	UHGV-0116515_9	PF10547,TIGR02681,COG3617	N/A	N/A	N/A	N/A
KOfam	UHGV-0116515_10	K07741	216.4	0	antB; anti-repressor protein	N/A
PHROG	UHGV-0116515_10	phrog_63	161.7	0	anti-repressor Ant	transcription regulation
UniRef90	UHGV-0116515_10	UniRef90_UPI000E49576D	367.0	0	phage antirepressor KilAC domain-containing protein	N/A
eggNOG-mapper	UHGV-0116515_10	1123263.AUKY01000076_gene1778	319.0	0	Phage antirepressor protein	N/A
Pfam	UHGV-0116515_10	PF08346	N/A	N/A	AntA/AntB antirepressor	AntA
Pfam	UHGV-0116515_10	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
COG	UHGV-0116515_10	COG3561	N/A	N/A	Phage anti-repressor protein Ant	N/A
structural_annotation	UHGV-0116515_10	PF03374,PF08346,TIGR02681,COG3645,COG3561	N/A	N/A	N/A	N/A
PHROG	UHGV-0116515_11	phrog_130	113.2	3.4e-33	anti-repressor Ant	transcription regulation
UniRef90	UHGV-0116515_11	UniRef90_H1BHQ8	367.0	0	Bro-N domain-containing protein	N/A
eggNOG-mapper	UHGV-0116515_11	1121342.AUCO01000004_gene621	128.0	3.53e-34	Phage antirepressor protein	N/A
Pfam	UHGV-0116515_11	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
COG	UHGV-0116515_11	COG3617	N/A	N/A	Prophage antirepressor	N/A
structural_annotation	UHGV-0116515_11	PF02498,TIGR02681,COG3617	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0116515_15	1235793.C809_00543	103.0	2.13e-27	N/A	N/A
Pfam	UHGV-0116515_19	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
PHROG	UHGV-0116515_22	phrog_5968	145.1	4.69435e-43	replisome organizer	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0116515_22	UniRef90_H1BHR9	235.0	0	Putative phage replisome organizer	N/A
eggNOG-mapper	UHGV-0116515_22	558169.AGAV01000001_gene3326	137.0	2.25e-38	N-terminal phage replisome organiser (Phage_rep_org_N)	N/A
Pfam	UHGV-0116515_22	PF09681	N/A	N/A	N-terminal phage replisome organiser (Phage_rep_org_N)	Phage_rep_org_N
NCBIFam	UHGV-0116515_22	TIGR01714.1	N/A	N/A	phage replisome organizer, putative, N-terminal region	N/A
COG	UHGV-0116515_22	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0116515_22	PF09681,TIGR01714,COG1321	N/A	N/A	N/A	N/A
PHROG	UHGV-0116515_23	phrog_270	98.6	7.6e-29	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0116515_23	742733.HMPREF9469_01845	103.0	2.69e-23	N/A	N/A
PHROG	UHGV-0116515_24	phrog_2289	51.3	0.000000000000023	helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0116515_24	UniRef90_H1BHS1	173.0	0	Inhibitor_G39P domain-containing protein	N/A
Pfam	UHGV-0116515_24	PF11417	N/A	N/A	Loader and inhibitor of phage G40P	Inhibitor_G39P
KOfam	UHGV-0116515_25	K02314	164.7	0	dnaB; replicative DNA helicase [EC:5.6.2.3]	N/A
PHROG	UHGV-0116515_25	phrog_19	173.7	0	DnaB-like replicative helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0116515_25	UniRef90_H1B475	775.0	0	SF4 helicase domain-containing protein	N/A
eggNOG-mapper	UHGV-0116515_25	1232446.BAIE02000002_gene817	341.0	0	Participates in initiation and elongation during chromosome replication	N/A
Pfam	UHGV-0116515_25	PF03796	N/A	N/A	DnaB-like helicase C terminal domain	DnaB_C
COG	UHGV-0116515_25	COG0305	N/A	N/A	Replicative DNA helicase	N/A
structural_annotation	UHGV-0116515_25	PF03796,PF00772,MF_04155,TIGR00665,COG0305	N/A	N/A	N/A	N/A
PHROG	UHGV-0116515_27	phrog_17842	95.0	3.6e-28	N/A	unknown function
eggNOG-mapper	UHGV-0116515_29	428127.EUBDOL_01518	71.2	0.00000000000000471	N/A	N/A
structural_annotation	UHGV-0116515_32	PF04545,PF01920,TIGR01636	N/A	N/A	N/A	N/A
PHROG	UHGV-0116515_36	phrog_1233	90.7	1.9e-26	N/A	unknown function
eggNOG-mapper	UHGV-0116515_36	1232449.BAHV02000018_gene1535	143.0	1.32002e-42	N/A	N/A
KOfam	UHGV-0116515_37	K07474	98.6	1.2e-28	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-0116515_37	phrog_2606	325.4	0	terminase small subunit	head and packaging
UniRef90	UHGV-0116515_37	UniRef90_UPI000E52C41D	490.0	0	terminase small subunit	N/A
eggNOG-mapper	UHGV-0116515_37	428127.EUBDOL_01230	272.0	0	terminase (Small subunit)	N/A
Pfam	UHGV-0116515_37	PF10668	N/A	N/A	Phage terminase small subunit	Phage_terminase
Pfam	UHGV-0116515_37	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-0116515_37	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0116515_37	PF03592,PF10668,NF040601,COG3728	N/A	N/A	N/A	N/A
KOfam	UHGV-0116515_38	K06909	84.0	2.3e-24	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0116515_38	phrog_2	68.1	2e-19	terminase large subunit	head and packaging
UniRef90	UHGV-0116515_38	UniRef90_U5F7S3	884.0	0	PBSX family phage terminase, large subunit	N/A
eggNOG-mapper	UHGV-0116515_38	552396.HMPREF0863_01628	884.0	0	Phage terminase, large subunit, PBSX family	N/A
COG	UHGV-0116515_38	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0116515_38	PF03237,PF17289,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0116515_39	phrog_533	287.5	0	portal protein	head and packaging
UniRef90	UHGV-0116515_39	UniRef90_UPI001D011A41	520.0	0	capsid protein	N/A
eggNOG-mapper	UHGV-0116515_39	552396.HMPREF0863_01629	961.0	0	N/A	N/A
structural_annotation	UHGV-0116515_39	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0116515_40	phrog_581	311.8	0	minor head protein	head and packaging
UniRef90	UHGV-0116515_40	UniRef90_A0A6B1RQY7	709.0	0	Capsid protein	N/A
eggNOG-mapper	UHGV-0116515_40	552396.HMPREF0863_01630	597.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-0116515_40	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
structural_annotation	UHGV-0116515_40	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-0116515_43	phrog_2303	162.2	0	head scaffolding protein	head and packaging
eggNOG-mapper	UHGV-0116515_43	552396.HMPREF0863_01634	343.0	0	N/A	N/A
PHROG	UHGV-0116515_44	phrog_422	320.4	0	major head protein	head and packaging
UniRef90	UHGV-0116515_44	UniRef90_A0A3E2WBR9	431.0	0	Capsid protein	N/A
eggNOG-mapper	UHGV-0116515_44	552396.HMPREF0863_01635	577.0	0	N/A	N/A
structural_annotation	UHGV-0116515_44	PF19821,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0116515_45	phrog_1378	70.4	2.4e-20	N/A	unknown function
eggNOG-mapper	UHGV-0116515_45	552396.HMPREF0863_01636	132.0	9.03e-40	N/A	N/A
PHROG	UHGV-0116515_46	phrog_541	81.8	7.8e-24	head-tail adaptor	connector
eggNOG-mapper	UHGV-0116515_46	552396.HMPREF0863_01637	223.0	0	N/A	N/A
PHROG	UHGV-0116515_47	phrog_8710	125.1	2.8e-37	N/A	unknown function
eggNOG-mapper	UHGV-0116515_47	552396.HMPREF0863_01638	203.0	0	N/A	N/A
structural_annotation	UHGV-0116515_47	PF10665,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0116515_48	phrog_556	60.2	3.2e-17	minor head protein	head and packaging
UniRef90	UHGV-0116515_48	UniRef90_UPI000246D598	224.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0116515_48	552396.HMPREF0863_01639	217.0	0	N/A	N/A
PHROG	UHGV-0116515_49	phrog_2595	108.2	5.8e-32	head-tail connector protein	connector
UniRef90	UHGV-0116515_49	UniRef90_UPI001D0A149F	206.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0116515_49	552396.HMPREF0863_01640	228.0	0	N/A	N/A
Pfam	UHGV-0116515_49	PF12691	N/A	N/A	Bacteriophage minor capsid protein	Minor_capsid_3
structural_annotation	UHGV-0116515_49	PF12691,COG5003	N/A	N/A	N/A	N/A
PHROG	UHGV-0116515_50	phrog_820	120.4	1.1e-35	major tail protein	tail
eggNOG-mapper	UHGV-0116515_50	552396.HMPREF0863_01641	291.0	0	domain, Protein	N/A
COG	UHGV-0116515_50	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0116515_50	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0116515_51	phrog_8300	91.5	6.7e-27	N/A	unknown function
eggNOG-mapper	UHGV-0116515_51	1232449.BAHV02000018_gene1519	91.3	2.85e-22	N/A	N/A
structural_annotation	UHGV-0116515_51	PF06896	N/A	N/A	N/A	N/A
PHROG	UHGV-0116515_52	phrog_8355	121.1	2.2e-36	N/A	unknown function
UniRef90	UHGV-0116515_52	UniRef90_UPI001E3020BE	162.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-0116515_52	552396.HMPREF0863_01643	156.0	0	N/A	N/A
Pfam	UHGV-0116515_52	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
PHROG	UHGV-0116515_53	phrog_37487	820.6	0	N/A	unknown function
UniRef90	UHGV-0116515_53	UniRef90_A0A4R3TDI6	775.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0116515_53	552396.HMPREF0863_01644	519.0	0	phage tail tape measure protein	N/A
COG	UHGV-0116515_53	COG1511	N/A	N/A	N/A	N/A
PHROG	UHGV-0116515_54	phrog_1194	63.1	4.7e-18	N/A	unknown function
eggNOG-mapper	UHGV-0116515_54	552396.HMPREF0863_01645	180.0	0	N/A	N/A
structural_annotation	UHGV-0116515_54	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0116515_55	phrog_2566	49.7	0.000000000000057	N/A	unknown function
eggNOG-mapper	UHGV-0116515_55	1294142.CINTURNW_1040	63.5	0.00000000000339	N/A	N/A
PHROG	UHGV-0116515_56	phrog_1401	48.9	0.00000000000011	N/A	unknown function
eggNOG-mapper	UHGV-0116515_56	272562.CA_C1880	54.7	0.0000000797	N/A	N/A
structural_annotation	UHGV-0116515_56	PF07761	N/A	N/A	N/A	N/A
PHROG	UHGV-0116515_57	phrog_16267	140.5	0	N/A	unknown function
UniRef90	UHGV-0116515_57	UniRef90_UPI0008EB4AF8	2093.0	0	tail fiber domain-containing protein	N/A
eggNOG-mapper	UHGV-0116515_57	552396.HMPREF0863_01647	837.0	0	Phage minor structural protein	N/A
Pfam	UHGV-0116515_57	PF13884	N/A	N/A	Chaperone of endosialidase	Peptidase_S74
COG	UHGV-0116515_57	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0116515_57	PF05113,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-0116515_59	phrog_4105	71.8	9.5e-21	N/A	unknown function
eggNOG-mapper	UHGV-0116515_59	1121105.ATXL01000027_gene760	64.3	0.0000000000108	N/A	N/A
KOfam	UHGV-0116515_60	K01448	89.9	3.8e-26	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0116515_60	phrog_2742	118.8	6e-35	endolysin	lysis
UniRef90	UHGV-0116515_60	UniRef90_H1BAK9	573.0	0	MurNAc-LAA domain-containing protein	N/A
eggNOG-mapper	UHGV-0116515_60	908340.HMPREF9406_2562	581.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-0116515_60	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
COG	UHGV-0116515_60	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0116515_60	PF01520,PF08460,MF_00417,TIGR02883,COG0860,COG4991	N/A	N/A	N/A	N/A
PHROG	UHGV-0116515_61	phrog_2158	250.4	0	abortive infection resistance protein	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0116515_61	UniRef90_A0A898FKY7	639.0	0	Abi family protein	N/A
eggNOG-mapper	UHGV-0116515_61	927704.SELR_16790	259.0	0	Abi-like protein	N/A
PADLOC	UHGV-0116515_61	AbiD	180.6	0	AbiD	Abi
Pfam	UHGV-0116515_61	PF07751	N/A	N/A	Abi-like protein	Abi_2
COG	UHGV-0116515_61	COG4823	N/A	N/A	Abortive infection bacteriophage resistance protein	N/A
structural_annotation	UHGV-0116515_61	PF07751,COG4823	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0116515	Yes	38,141	41	93	1
UHGV-1502757	No	37,886	40	92	1
UHGV-0379636	No	20,422	42	50	1
UHGV-1623422	No	11,371	40	30	1
UHGV-0136920	No	11,119	41	28	1