vOTU vOTU-079686

vOTU: vOTU-079686

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-079686
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00003 → vSUBFAM-00680 → vGENUS-12015 → vSUBGEN-17771 → vOTU-079686
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → CAG-353 → CAG-353 sp900066885
Host range breadth	Species
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0385134
Biosample ID	N/A
Genome length (bp)	35,047 bps
CheckV completeness	99.90% (High-quality)
CDS count	54
CDS density	95.86%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → CAG-353 → CAG-353 sp900066885	Total connections	218	Host agreement	97.71
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → CAG-353 → CAG-353 sp900066885	Total connections	69	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 99.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-0385134_3	UniRef90_A0A352A2H2	56.2	0.0000000177	DNA-binding protein	N/A
eggNOG-mapper	UHGV-0385134_3	929506.CbC4_1187	57.4	0.00000000107	N/A	N/A
PHROG	UHGV-0385134_4	phrog_5079	71.8	6.7e-21	N/A	unknown function
eggNOG-mapper	UHGV-0385134_4	1122143.AUEG01000001_gene582	57.0	0.000000000126	N/A	N/A
structural_annotation	UHGV-0385134_6	MF_00273	N/A	N/A	N/A	N/A
PHROG	UHGV-0385134_9	phrog_757	190.4	0	DNA methyltransferase	other
UniRef90	UHGV-0385134_9	UniRef90_A0A349YFI2	267.0	0	DNA cytosine methyltransferase	N/A
eggNOG-mapper	UHGV-0385134_9	1235790.C805_00032	225.0	0	DNA (cytosine-5-)-methyltransferase activity	N/A
COG	UHGV-0385134_9	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-0385134_9	PF00145,MF_01872,TIGR00675,COG0270	N/A	N/A	N/A	N/A
PHROG	UHGV-0385134_10	phrog_424	102.2	3.4e-30	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
eggNOG-mapper	UHGV-0385134_10	693746.OBV_43240	492.0	0	N/A	N/A
COG	UHGV-0385134_10	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-0385134_10	PF01507,MF_00064,TIGR00434,COG0175	N/A	N/A	N/A	N/A
PHROG	UHGV-0385134_11	phrog_561	150.8	5.60519e-45	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0385134_11	UniRef90_UPI0011C8A287	242.0	0	recombinase RecT	N/A
eggNOG-mapper	UHGV-0385134_11	33035.JPJF01000071_gene4462	219.0	0	N/A	N/A
structural_annotation	UHGV-0385134_11	PF03837,TIGR01913	N/A	N/A	N/A	N/A
KOfam	UHGV-0385134_12	K03546	40.1	0.000000000011	sbcC, rad50; DNA repair protein SbcC/Rad50	N/A
PHROG	UHGV-0385134_12	phrog_1499	294.7	0	N/A	unknown function
UniRef90	UHGV-0385134_12	UniRef90_A0A1C6FNE5	862.0	0	Chromosome segregation protein	N/A
eggNOG-mapper	UHGV-0385134_12	1120998.AUFC01000030_gene2215	610.0	0	DNA recombination	N/A
Pfam	UHGV-0385134_12	PF13476	N/A	N/A	AAA domain	AAA_23
COG	UHGV-0385134_12	COG0497	N/A	N/A	DNA repair ATPase RecN	N/A
structural_annotation	UHGV-0385134_12	PF11398,MF_00365,NF008121,COG0497	N/A	N/A	N/A	N/A
PHROG	UHGV-0385134_13	phrog_1227	257.1	0	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0385134_13	UniRef90_UPI00041F978E	301.0	0	PD-(D/E)XK nuclease-like domain-containing protein	N/A
eggNOG-mapper	UHGV-0385134_13	1120998.AUFC01000030_gene2216	301.0	0	N/A	N/A
Pfam	UHGV-0385134_13	PF12684	N/A	N/A	N/A	DUF3799
COG	UHGV-0385134_13	COG1074	N/A	N/A	3'-5' helicase subunit RecB of the DNA repair enzyme RecBCD (exonuclease V)	N/A
structural_annotation	UHGV-0385134_13	PF12684,TIGR01896,COG4343	N/A	N/A	N/A	N/A
PHROG	UHGV-0385134_14	phrog_3490	149.2	1.96182e-44	ERCC4-type nuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0385134_14	UniRef90_A0A1C6FNL5	309.0	0	ERCC4 domain-containing protein	N/A
eggNOG-mapper	UHGV-0385134_14	357809.Cphy_2986	181.0	0	N/A	N/A
Pfam	UHGV-0385134_14	PF02732	N/A	N/A	ERCC4 domain	ERCC4
structural_annotation	UHGV-0385134_14	PF03834,NF040956,COG1948	N/A	N/A	N/A	N/A
KOfam	UHGV-0385134_15	K03111	114.8	1.3e-33	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0385134_15	phrog_44	126.0	3e-37	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0385134_15	UniRef90_A0A1C6FN64	264.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0385134_15	641112.ACOK01000080_gene3234	145.0	1.68016e-42	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-0385134_15	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0385134_15	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0385134_15	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0385134_15	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0385134_15	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0385134_16	phrog_16304	82.5	6.8e-24	N/A	unknown function
UniRef90	UHGV-0385134_16	UniRef90_A0A1C6FNF0	425.0	0	N/A	N/A
eggNOG-mapper	UHGV-0385134_16	1328030.S0A2K1_9CAUD	58.9	0.0000000964	N/A	N/A
Pfam	UHGV-0385134_16	PF19808	N/A	N/A	N/A	DUF6291
structural_annotation	UHGV-0385134_16	PF19808	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0385134_18	PF11483	N/A	N/A	N/A	N/A
PHROG	UHGV-0385134_22	phrog_36	54.7	0.0000000000000021	transcriptional regulator	transcription regulation
UniRef90	UHGV-0385134_22	UniRef90_UPI0004005A10	65.1	0.000000000117	N/A	N/A
eggNOG-mapper	UHGV-0385134_22	1121871.AUAT01000030_gene1019	65.1	0.0000000000197	N/A	N/A
COG	UHGV-0385134_22	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-0385134_22	PF04545,MF_00674,NF009180,COG1342	N/A	N/A	N/A	N/A
KOfam	UHGV-0385134_23	K06909	404.4	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0385134_23	phrog_3717	155.3	0	terminase large subunit	head and packaging
UniRef90	UHGV-0385134_23	UniRef90_A0A1C6GFY7	1040.0	0	Phage terminase, large subunit, PBSX family	N/A
eggNOG-mapper	UHGV-0385134_23	411461.DORFOR_01162	593.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-0385134_23	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-0385134_23	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-0385134_23	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0385134_23	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0385134_23	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0385134_24	phrog_533	341.6	0	portal protein	head and packaging
UniRef90	UHGV-0385134_24	UniRef90_A0A1C6GG74	887.0	0	Phage portal protein, putative, A118 family	N/A
eggNOG-mapper	UHGV-0385134_24	642492.Clole_0815	348.0	0	N/A	N/A
Pfam	UHGV-0385134_24	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0385134_24	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0385134_25	phrog_581	343.5	0	minor head protein	head and packaging
UniRef90	UHGV-0385134_25	UniRef90_A0A1C6GGW2	760.0	0	Phage minor capsid protein 2	N/A
eggNOG-mapper	UHGV-0385134_25	1151292.QEW_4539	323.0	0	N/A	N/A
Pfam	UHGV-0385134_25	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
Pfam	UHGV-0385134_25	PF15542	N/A	N/A	Bacterial toxin 50	Ntox50
COG	UHGV-0385134_25	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0385134_25	PF06152,PF15542	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0385134_26	PF11607,MF_01077,NF037951,COG4568	N/A	N/A	N/A	N/A
PHROG	UHGV-0385134_27	phrog_774	62.4	9.5e-18	N/A	unknown function
eggNOG-mapper	UHGV-0385134_27	397290.C810_05225	114.0	5.68e-32	N/A	N/A
PHROG	UHGV-0385134_28	phrog_194	104.1	1.6e-30	head scaffolding protein	head and packaging
UniRef90	UHGV-0385134_28	UniRef90_A0A1C6GGD5	336.0	0	Phage minor structural protein GP20	N/A
eggNOG-mapper	UHGV-0385134_28	411490.ANACAC_00778	125.0	2.09e-33	COG NOG36366 non supervised orthologous group	N/A
Pfam	UHGV-0385134_28	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-0385134_28	PF06810,MF_02110	N/A	N/A	N/A	N/A
PHROG	UHGV-0385134_29	phrog_422	228.3	0	major head protein	head and packaging
UniRef90	UHGV-0385134_29	UniRef90_A0A345MKD0	342.0	0	Main capsid protein	N/A
eggNOG-mapper	UHGV-0385134_29	1160721.RBI_II00538	317.0	0	N/A	N/A
structural_annotation	UHGV-0385134_29	PF05065,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0385134_30	phrog_541	83.3	2.5e-24	head-tail adaptor	connector
eggNOG-mapper	UHGV-0385134_30	642492.Clole_0822	74.7	0.00000000000000147	N/A	N/A
PHROG	UHGV-0385134_31	phrog_793	48.9	0.00000000000011	head-tail adaptor	connector
UniRef90	UHGV-0385134_31	UniRef90_A0A1C6GM46	183.0	0	Minor capsid protein	N/A
eggNOG-mapper	UHGV-0385134_31	1238184.CM001792_gene97	53.9	0.0000000847	Minor capsid protein	N/A
Pfam	UHGV-0385134_31	PF10665	N/A	N/A	Minor capsid protein	Minor_capsid_1
COG	UHGV-0385134_31	COG5652	N/A	N/A	VanZ-like family protein (function unknown)	N/A
structural_annotation	UHGV-0385134_31	PF10665,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0385134_32	phrog_556	73.3	2.8e-21	minor head protein	head and packaging
UniRef90	UHGV-0385134_32	UniRef90_A0A1C6GMA0	104.0	2.24e-26	Minor capsid protein	N/A
eggNOG-mapper	UHGV-0385134_32	1497679.EP56_07750	72.4	0.00000000000000738	Minor capsid protein	N/A
Pfam	UHGV-0385134_32	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0385134_32	PF11114	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0385134_33	PF08873	N/A	N/A	N/A	N/A
PHROG	UHGV-0385134_34	phrog_820	49.7	0.000000000000035	major tail protein	tail
UniRef90	UHGV-0385134_34	UniRef90_A0A174M1L1	115.0	1.98e-27	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0385134_34	663278.Ethha_0099	89.0	3.71e-19	N/A	N/A
structural_annotation	UHGV-0385134_34	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0385134_35	536233.CLO_0892	55.1	0.0000000553	N/A	N/A
structural_annotation	UHGV-0385134_35	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-0385134_36	phrog_706	111.2	9e-33	N/A	unknown function
UniRef90	UHGV-0385134_36	UniRef90_A0A1C6GMP1	186.0	0	Bacteriophage Gp15 protein	N/A
eggNOG-mapper	UHGV-0385134_36	1321782.HMPREF1986_02275	54.7	0.00000173	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0385134_36	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0385134_36	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0385134_37	phrog_6900	106.3	5e-31	tail length tape measure protein	tail
UniRef90	UHGV-0385134_37	UniRef90_A0A1C6GMQ4	597.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0385134_37	1504822.CCNO01000012_gene489	170.0	1.93996e-41	phage tail tape measure protein	N/A
COG	UHGV-0385134_37	COG5412	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0385134_38	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0385134_39	PF14594,NF033848,COG3500	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0385134_44	PF21621	N/A	N/A	N/A	N/A
PHROG	UHGV-0385134_46	phrog_199	77.9	1.2e-22	holin	lysis
UniRef90	UHGV-0385134_46	UniRef90_A0A1C6CUD9	282.0	0	Phage-related holin (Lysis protein)	N/A
eggNOG-mapper	UHGV-0385134_46	1120746.CCNL01000017_gene2574	170.0	0	toxin secretion phage lysis holin	N/A
Pfam	UHGV-0385134_46	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-0385134_46	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
COG	UHGV-0385134_46	COG4824	N/A	N/A	Phage-related holin (Lysis protein)	N/A
structural_annotation	UHGV-0385134_46	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
KOfam	UHGV-0385134_47	K01447	90.7	2.3e-26	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0385134_47	phrog_1794	87.8	1.7e-25	amidase	lysis
UniRef90	UHGV-0385134_47	UniRef90_R7KX59	461.0	0	Muramidase (Flagellum-specific)	N/A
eggNOG-mapper	UHGV-0385134_47	1298920.KI911353_gene2668	84.0	2.01e-16	N-Acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-0385134_47	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
Pfam	UHGV-0385134_47	PF05036	N/A	N/A	SPOR domain	SPOR
COG	UHGV-0385134_47	COG5632	N/A	N/A	N-acetylmuramoyl-L-alanine amidase CwlA	N/A
structural_annotation	UHGV-0385134_47	PF01510,MF_04111,NF008758,COG5632	N/A	N/A	N/A	N/A
KOfam	UHGV-0385134_48	K06400	359.5	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-0385134_48	phrog_95	338.6	0	integrase	integration and excision
UniRef90	UHGV-0385134_48	UniRef90_A0A1C6GEY5	949.0	0	Resolvase, N terminal domain	N/A
eggNOG-mapper	UHGV-0385134_48	537013.CLOSTMETH_02040	332.0	0	N/A	N/A
Pfam	UHGV-0385134_48	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-0385134_48	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-0385134_48	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-0385134_48	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0385134_48	PF07508,PF00239,NF041201,COG1961	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0385134_49	PF19495,TIGR03931	N/A	N/A	N/A	N/A
UniRef90	UHGV-0385134_50	UniRef90_UPI001EDE047F	152.0	5.41001e-40	phage minor capsid protein	N/A
eggNOG-mapper	UHGV-0385134_50	411902.CLOBOL_02557	124.0	1.76e-30	N/A	N/A
structural_annotation	UHGV-0385134_50	PF06152	N/A	N/A	N/A	N/A
KOfam	UHGV-0385134_51	K01356	88.5	1e-25	lexA; repressor LexA [EC:3.4.21.88]	N/A
PHROG	UHGV-0385134_51	phrog_4	132.6	3.4e-39	transcriptional repressor	transcription regulation
UniRef90	UHGV-0385134_51	UniRef90_UPI001F06DC2B	213.0	0	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0385134_51	1232453.BAIF02000027_gene4195	177.0	0	Peptidase S24-like	N/A
Pfam	UHGV-0385134_51	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
Pfam	UHGV-0385134_51	PF00717	N/A	N/A	Peptidase S24-like	Peptidase_S24
COG	UHGV-0385134_51	COG2932	N/A	N/A	Phage repressor protein C, contains Cro/C1-type HTH and peptisase s24 domains	N/A
structural_annotation	UHGV-0385134_51	PF13560,NF041951,COG1396	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0385134_52	PF12844,NF041951,COG1396	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0385134	Yes	35,047	48	100	1