vOTU vOTU-079938

vOTU: vOTU-079938

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-079938
Number of genomes	4
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Enterocloster → Enterocloster citroniae
Taxonomy (UHGV)	vFAM-00010 → vSUBFAM-00589 → vGENUS-13281 → vSUBGEN-21188 → vOTU-079938
Host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Enterocloster
Host range breadth	Genus
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1340914
Biosample ID	N/A
Genome length (bp)	38,458 bps
CheckV completeness	91.62% (High-quality)
CDS count	59
CDS density	93.83%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Enterocloster	Total connections	47	Host agreement	89.36
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Enterocloster → Enterocloster citroniae	Total connections	3	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 91.62)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-1340914_1	411902.CLOBOL_00139	63.9	0.0000000000095	Phage terminase, large subunit, PBSX family	N/A
COG	UHGV-1340914_1	COG1783	N/A	N/A	Phage terminase large subunit	N/A
PHROG	UHGV-1340914_2	phrog_533	412.6	0	portal protein	head and packaging
UniRef90	UHGV-1340914_2	UniRef90_UPI0011062C56	832.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-1340914_2	411902.CLOBOL_00138	851.0	0	N/A	N/A
Pfam	UHGV-1340914_2	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1340914_2	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-1340914_4	phrog_581	310.8	0	minor head protein	head and packaging
UniRef90	UHGV-1340914_4	UniRef90_A0A3E2UZQ7	742.0	0	Minor capsid protein	N/A
eggNOG-mapper	UHGV-1340914_4	411902.CLOBOL_00137	667.0	0	N/A	N/A
Pfam	UHGV-1340914_4	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-1340914_4	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1340914_4	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-1340914_5	phrog_419	108.2	8.3e-32	N/A	unknown function
UniRef90	UHGV-1340914_5	UniRef90_A0A0A8WEQ1	115.0	3.2e-31	Phage-related protein	N/A
eggNOG-mapper	UHGV-1340914_5	797515.HMPREF9103_00825	121.0	1.43e-34	N/A	N/A
PHROG	UHGV-1340914_6	phrog_194	100.2	2.4e-29	head scaffolding protein	head and packaging
UniRef90	UHGV-1340914_6	UniRef90_C0CSR8	294.0	0	Phage minor structural protein GP20	N/A
eggNOG-mapper	UHGV-1340914_6	411902.CLOBOL_00135	323.0	0	COG NOG36366 non supervised orthologous group	N/A
Pfam	UHGV-1340914_6	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-1340914_6	PF06810,MF_02110	N/A	N/A	N/A	N/A
PHROG	UHGV-1340914_7	phrog_10	181.5	0	major head protein	head and packaging
UniRef90	UHGV-1340914_7	UniRef90_UPI000E438149	702.0	0	phage major capsid protein	N/A
eggNOG-mapper	UHGV-1340914_7	411902.CLOBOL_00134	730.0	0	Phage capsid family	N/A
Pfam	UHGV-1340914_7	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-1340914_7	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-1340914_7	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-1340914_7	PF05065,PF13620,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1340914_8	phrog_541	89.5	2.9e-26	head-tail adaptor	connector
eggNOG-mapper	UHGV-1340914_8	411902.CLOBOL_00133	218.0	0	N/A	N/A
PHROG	UHGV-1340914_9	phrog_3366	77.8	1e-22	N/A	unknown function
eggNOG-mapper	UHGV-1340914_9	411902.CLOBOL_00132	213.0	0	N/A	N/A
Pfam	UHGV-1340914_9	PF20536	N/A	N/A	N/A	DUF6751
structural_annotation	UHGV-1340914_9	PF20536,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1340914_10	phrog_556	86.8	1.1e-25	minor head protein	head and packaging
UniRef90	UHGV-1340914_10	UniRef90_UPI00189CE0C6	243.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-1340914_10	411902.CLOBOL_00131	254.0	0	Minor capsid protein	N/A
Pfam	UHGV-1340914_10	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-1340914_10	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-1340914_11	phrog_3266	110.0	1.4e-32	tail completion	connector
eggNOG-mapper	UHGV-1340914_11	411902.CLOBOL_00130	268.0	0	N/A	N/A
structural_annotation	UHGV-1340914_11	PF20765	N/A	N/A	N/A	N/A
PHROG	UHGV-1340914_12	phrog_3099	168.5	0	N/A	unknown function
eggNOG-mapper	UHGV-1340914_12	411902.CLOBOL_00129	297.0	0	N/A	N/A
structural_annotation	UHGV-1340914_12	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1340914_13	phrog_11299	84.8	1e-24	N/A	unknown function
eggNOG-mapper	UHGV-1340914_13	411902.CLOBOL_00128	241.0	0	N/A	N/A
structural_annotation	UHGV-1340914_13	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-1340914_14	phrog_706	134.8	5.4e-40	N/A	unknown function
UniRef90	UHGV-1340914_14	UniRef90_A0A0F0CE18	367.0	0	Bacteriophage Gp15 protein	N/A
eggNOG-mapper	UHGV-1340914_14	411902.CLOBOL_00127	353.0	0	N/A	N/A
Pfam	UHGV-1340914_14	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-1340914_14	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-1340914_15	phrog_1535	297.4	0	tail length tape measure protein	tail
UniRef90	UHGV-1340914_15	UniRef90_A0A1H7MQ92	170.0	5.04e-39	Phage-related protein	N/A
eggNOG-mapper	UHGV-1340914_15	411902.CLOBOL_00126	1250.0	0	N/A	N/A
COG	UHGV-1340914_15	COG5283	N/A	N/A	Phage-related tail protein	N/A
PHROG	UHGV-1340914_16	phrog_1194	58.0	1.5e-16	N/A	unknown function
eggNOG-mapper	UHGV-1340914_16	411902.CLOBOL_00125	249.0	0	N/A	N/A
structural_annotation	UHGV-1340914_16	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1340914_17	phrog_13879	212.8	0	N/A	unknown function
eggNOG-mapper	UHGV-1340914_17	411902.CLOBOL_00124	1209.0	0	N/A	N/A
structural_annotation	UHGV-1340914_17	PF14594,PF21114,MF_00813,NF033848,TIGR02961,COG4379,COG4266	N/A	N/A	N/A	N/A
PHROG	UHGV-1340914_18	phrog_18725	50.6	0.000000000000037	N/A	unknown function
eggNOG-mapper	UHGV-1340914_18	411902.CLOBOL_00123	226.0	0	N/A	N/A
eggNOG-mapper	UHGV-1340914_19	411902.CLOBOL_00122	143.0	9.10984e-42	N/A	N/A
PHROG	UHGV-1340914_20	phrog_19111	50.4	0.000000000000021	N/A	unknown function
eggNOG-mapper	UHGV-1340914_20	411902.CLOBOL_00121	130.0	2.11e-34	nuclear chromosome segregation	N/A
COG	UHGV-1340914_20	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
structural_annotation	UHGV-1340914_20	PF17994,MF_00813,NF038128,COG5156	N/A	N/A	N/A	N/A
PHROG	UHGV-1340914_22	phrog_199	53.9	0.0000000000000021	holin	lysis
UniRef90	UHGV-1340914_22	UniRef90_R0CKA9	289.0	0	Toxin secretion/phage lysis holin	N/A
eggNOG-mapper	UHGV-1340914_22	1121333.JMLH01000047_gene1005	160.0	0	Bacteriophage holin family	N/A
Pfam	UHGV-1340914_22	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-1340914_22	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
structural_annotation	UHGV-1340914_22	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
PHROG	UHGV-1340914_24	phrog_19695	69.4	7.9e-20	N/A	unknown function
eggNOG-mapper	UHGV-1340914_24	411462.DORLON_00772	88.6	3.85e-21	N/A	N/A
structural_annotation	UHGV-1340914_24	PF10651	N/A	N/A	N/A	N/A
PHROG	UHGV-1340914_25	phrog_6782	46.5	0.00000000000014	tail fiber protein	tail
UniRef90	UHGV-1340914_25	UniRef90_A0A174NC72	294.0	0	BppU_N domain-containing protein	N/A
eggNOG-mapper	UHGV-1340914_25	742733.HMPREF9469_00973	284.0	0	N/A	N/A
KOfam	UHGV-1340914_26	K00689	42.4	0.0000000000024	E2.4.1.5; dextransucrase [EC:2.4.1.5]	N/A
PHROG	UHGV-1340914_26	phrog_7854	73.6	3.3e-21	endolysin	lysis
UniRef90	UHGV-1340914_26	UniRef90_A0A0F0CDM5	553.0	0	Autolysin	N/A
eggNOG-mapper	UHGV-1340914_26	1304866.K413DRAFT_1245	422.0	0	Putative cell wall binding repeat	N/A
Pfam	UHGV-1340914_26	PF00877	N/A	N/A	NlpC/P60 family	NLPC_P60
Pfam	UHGV-1340914_26	PF19127	N/A	N/A	Choline-binding repeat	Choline_bind_3
COG	UHGV-1340914_26	COG5263	N/A	N/A	Glucan-binding domain (YG repeat)	N/A
structural_annotation	UHGV-1340914_26	PF19127,PF05382,MF_00727,TIGR04035,NF033742,COG5263	N/A	N/A	N/A	N/A
PHROG	UHGV-1340914_27	phrog_2657	223.9	0	transcriptional regulator	transcription regulation
UniRef90	UHGV-1340914_27	UniRef90_UPI0002D18C60	410.0	0	Rha family transcriptional regulator	N/A
eggNOG-mapper	UHGV-1340914_27	742740.HMPREF9474_03525	357.0	0	phage regulatory protein, rha family	N/A
Pfam	UHGV-1340914_27	PF09669	N/A	N/A	Phage regulatory protein Rha (Phage_pRha)	Phage_pRha
NCBIFam	UHGV-1340914_27	TIGR02681.1	N/A	N/A	phage regulatory protein, Rha family	N/A
COG	UHGV-1340914_27	COG3646	N/A	N/A	Phage regulatory protein Rha	N/A
structural_annotation	UHGV-1340914_27	PF09669,TIGR02681,COG3646	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1340914_28	PF17516,MF_01354,NF037951,COG1862	N/A	N/A	N/A	N/A
KOfam	UHGV-1340914_29	K14059	223.6	0	int; integrase	N/A
PHROG	UHGV-1340914_29	phrog_1	181.7	0	integrase	integration and excision
UniRef90	UHGV-1340914_29	UniRef90_A0A5M8BL88	678.0	0	Tyrosine-type recombinase/integrase	N/A
eggNOG-mapper	UHGV-1340914_29	742733.HMPREF9469_01857	676.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-1340914_29	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
Pfam	UHGV-1340914_29	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1340914_29	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1340914_29	PF00589,PF13102,MF_01808,TIGR02224,COG4974	N/A	N/A	N/A	N/A
PHROG	UHGV-1340914_30	phrog_87	59.3	3.9e-17	metallo-protease	other
UniRef90	UHGV-1340914_30	UniRef90_G5HGT7	468.0	0	Peptidase_M78 domain-containing protein	N/A
eggNOG-mapper	UHGV-1340914_30	742733.HMPREF9469_01856	468.0	0	N/A	N/A
Pfam	UHGV-1340914_30	PF06114	N/A	N/A	IrrE N-terminal-like domain	Peptidase_M78
structural_annotation	UHGV-1340914_30	PF06114,COG2856	N/A	N/A	N/A	N/A
KOfam	UHGV-1340914_31	K22300	41.0	0.000000000039	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-1340914_31	phrog_8	58.9	1.3e-16	transcriptional regulator	transcription regulation
UniRef90	UHGV-1340914_31	UniRef90_A0A0J9CFC3	228.0	0	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-1340914_31	742733.HMPREF9469_01855	160.0	0	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-1340914_31	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
COG	UHGV-1340914_31	COG3093	N/A	N/A	Plasmid maintenance system antidote protein VapI, contains XRE-type HTH domain	N/A
structural_annotation	UHGV-1340914_31	PF01381,MF_02017,NF041951,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-1340914_32	phrog_8	55.0	0.000000000000002	transcriptional regulator	transcription regulation
UniRef90	UHGV-1340914_32	UniRef90_A0A0J9CH97	140.0	1.54984e-42	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-1340914_32	476272.RUMHYD_01735	66.2	0.0000000000000901	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-1340914_32	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-1340914_32	PF01381,NF041951,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-1340914_39	K03698	65.0	1e-18	cbf, cbf1; 3'-5' exoribonuclease [EC:3.1.-.-]	N/A
PHROG	UHGV-1340914_39	phrog_5889	95.5	5e-28	N/A	unknown function
UniRef90	UHGV-1340914_39	UniRef90_R0CVH9	382.0	0	HDc domain-containing protein	N/A
eggNOG-mapper	UHGV-1340914_39	411468.CLOSCI_00316	219.0	0	Metal dependent phosphohydrolases with conserved 'HD' motif.	N/A
Pfam	UHGV-1340914_39	PF01966	N/A	N/A	HD domain	HD
NCBIFam	UHGV-1340914_39	TIGR00277.1	N/A	N/A	HDIG domain-containing protein	N/A
COG	UHGV-1340914_39	COG3481	N/A	N/A	3'-5' exoribonuclease YhaM, can participate in 23S rRNA maturation, HD superfamily	N/A
structural_annotation	UHGV-1340914_39	PF07514,MF_01427,NF010007,COG3481	N/A	N/A	N/A	N/A
PHROG	UHGV-1340914_40	phrog_14970	324.5	0	N/A	unknown function
eggNOG-mapper	UHGV-1340914_40	411468.CLOSCI_00315	268.0	0	double-strand break repair protein	N/A
COG	UHGV-1340914_40	COG4712	N/A	N/A	Predicted ssDNA annealing protein, contains HHH motif, Rad42/Rad22/RecT/erf family	N/A
structural_annotation	UHGV-1340914_40	PF04098,TIGR00607,COG4712	N/A	N/A	N/A	N/A
PHROG	UHGV-1340914_41	phrog_72	41.6	0.000000000014	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1340914_41	411468.CLOSCI_00314	133.0	9.58e-37	N/A	N/A
PHROG	UHGV-1340914_42	phrog_7566	90.7	9.8e-27	N/A	unknown function
UniRef90	UHGV-1340914_42	UniRef90_A0A414AP32	209.0	0	Phosphoenolpyruvate carboxykinase	N/A
eggNOG-mapper	UHGV-1340914_42	1304866.K413DRAFT_1198	58.2	0.00000000104	N/A	N/A
PHROG	UHGV-1340914_43	phrog_2113	64.9	9.3e-19	N/A	unknown function
structural_annotation	UHGV-1340914_43	PF01978,NF007528,COG3388	N/A	N/A	N/A	N/A
PHROG	UHGV-1340914_44	phrog_244	74.8	1.4e-21	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1340914_44	742740.HMPREF9474_03491	169.0	0	N/A	N/A
structural_annotation	UHGV-1340914_44	PF01870,MF_01490,NF040854,COG1591	N/A	N/A	N/A	N/A
PHROG	UHGV-1340914_45	phrog_2514	97.6	1.3e-28	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1340914_45	UniRef90_A0A174WT25	151.0	4.74998e-41	Replication initiator A domain-containing protein	N/A
eggNOG-mapper	UHGV-1340914_45	742733.HMPREF9469_01845	478.0	0	N/A	N/A
structural_annotation	UHGV-1340914_45	PF10771,MF_01177,TIGR01714,COG5529	N/A	N/A	N/A	N/A
KOfam	UHGV-1340914_46	K02315	146.0	3.09687e-43	dnaC; DNA replication protein DnaC	N/A
PHROG	UHGV-1340914_46	phrog_50	146.6	1.90577e-43	DnaC-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1340914_46	UniRef90_N9XN33	454.0	0	IstB_IS21 domain-containing protein	N/A
eggNOG-mapper	UHGV-1340914_46	742733.HMPREF9469_01844	414.0	0	IstB-like ATP binding protein	N/A
Pfam	UHGV-1340914_46	PF01695	N/A	N/A	IstB-like ATP binding protein	IstB_IS21
COG	UHGV-1340914_46	COG1484	N/A	N/A	DNA replication protein DnaC	N/A
structural_annotation	UHGV-1340914_46	PF01695,MF_00377,NF005992,COG1484	N/A	N/A	N/A	N/A
KOfam	UHGV-1340914_48	K00558	165.8	0	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-1340914_48	phrog_363	258.1	0	DNA methyltransferase	other
UniRef90	UHGV-1340914_48	UniRef90_UPI0018990EC8	677.0	0	DNA (cytosine-5-)-methyltransferase	N/A
eggNOG-mapper	UHGV-1340914_48	742738.HMPREF9460_04053	358.0	0	C-5 cytosine-specific DNA methylase	N/A
PADLOC	UHGV-1340914_48	MTase_II_00058	128.7	8.9e-38	Type II methyltransferase	RM
Pfam	UHGV-1340914_48	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
NCBIFam	UHGV-1340914_48	TIGR00675.1	N/A	N/A	DNA (cytosine-5-)-methyltransferase	N/A
COG	UHGV-1340914_48	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-1340914_48	PF00145,MF_00351,TIGR00675,COG0270	N/A	N/A	N/A	N/A
PHROG	UHGV-1340914_49	phrog_15198	43.0	0.0000000000036	N/A	unknown function
UniRef90	UHGV-1340914_49	UniRef90_A0A0F0C886	230.0	0	N/A	N/A
eggNOG-mapper	UHGV-1340914_49	1232453.BAIF02000057_gene1153	52.8	0.000001	N/A	N/A
Pfam	UHGV-1340914_49	PF04448	N/A	N/A	N/A	DUF551
structural_annotation	UHGV-1340914_50	NF008911	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1340914_51	67356.KL575597_gene7705	62.4	0.00000000128	N/A	N/A
PHROG	UHGV-1340914_52	phrog_9298	249.8	0	radical SAM domain protein	other
UniRef90	UHGV-1340914_52	UniRef90_A0A3E2VQZ3	590.0	0	Radical SAM protein	N/A
eggNOG-mapper	UHGV-1340914_52	478749.BRYFOR_07592	504.0	0	N/A	N/A
COG	UHGV-1340914_52	COG1032	N/A	N/A	Radical SAM superfamily enzyme YgiQ, UPF0313 family	N/A
structural_annotation	UHGV-1340914_52	MF_01865,TIGR00089,COG0621	N/A	N/A	N/A	N/A
PHROG	UHGV-1340914_55	phrog_32198	159.0	0	N/A	unknown function
eggNOG-mapper	UHGV-1340914_56	411902.CLOBOL_05675	70.1	0.00000000000000852	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1340914	Yes	38,458	47	92	1
UHGV-0395706	No	23,320	49	55	1
UHGV-0412620	No	16,969	45	39	1
UHGV-0411468	No	10,352	45	21	1