vOTU vOTU-080905

vOTU: vOTU-080905

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-080905
Number of genomes	3
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia
Taxonomy (UHGV)	vFAM-00010 → vSUBFAM-01811 → vGENUS-01977 → vSUBGEN-24736 → vOTU-080905
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → CAG-272 → CAG-272 → CAG-272 sp000433515
Host range breadth	Species
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0052677
Biosample ID	SAMEA2142349
Genome length (bp)	42,160 bps
CheckV completeness	95.26% (High-quality)
CDS count	67
CDS density	91.48%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → CAG-272 → CAG-272 → CAG-272 sp000433515	Total connections	108	Host agreement	99.07
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia	Total connections	2	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 95.26)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-0052677_2	UniRef90_A0A098GES5	106.0	6.18e-28	Putative phage associated protein	N/A
structural_annotation	UHGV-0052677_2	PF01423,MF_00257,NF001963,COG1958	N/A	N/A	N/A	N/A
PHROG	UHGV-0052677_3	phrog_7566	101.0	6.2e-30	N/A	unknown function
eggNOG-mapper	UHGV-0052677_3	1118057.CAGX01000020_gene1648	50.4	0.000000899	N/A	N/A
PHROG	UHGV-0052677_4	phrog_72	45.9	0.00000000000085	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0052677_4	UniRef90_UPI000C7BF263	95.9	9.34e-22	recombination protein NinB	N/A
eggNOG-mapper	UHGV-0052677_4	445972.ANACOL_01825	108.0	3.18e-27	N/A	N/A
structural_annotation	UHGV-0052677_4	PF05772,NF007281	N/A	N/A	N/A	N/A
UniRef90	UHGV-0052677_5	UniRef90_B0PAM4	146.0	2.79993e-41	YqaJ domain-containing protein	N/A
eggNOG-mapper	UHGV-0052677_5	1308866.J416_09399	56.2	0.000000671	YqaJ viral recombinase family	N/A
COG	UHGV-0052677_5	COG5377	N/A	N/A	Phage-related protein, predicted endonuclease	N/A
structural_annotation	UHGV-0052677_5	PF12684,MF_03030,TIGR04328,COG4343	N/A	N/A	N/A	N/A
PHROG	UHGV-0052677_6	phrog_8492	50.4	0.000000000000033	Sak-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0052677_6	UniRef90_A0A6N9QJT6	206.0	0	N/A	N/A
eggNOG-mapper	UHGV-0052677_6	33035.JPJF01000135_gene5082	125.0	2.85e-33	N/A	N/A
Pfam	UHGV-0052677_6	PF06378	N/A	N/A	N/A	DUF1071
structural_annotation	UHGV-0052677_6	PF06378,TIGR00607,COG5055	N/A	N/A	N/A	N/A
Pfam	UHGV-0052677_10	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
PHROG	UHGV-0052677_12	phrog_8	42.3	0.000000000016	transcriptional regulator	transcription regulation
COG	UHGV-0052677_12	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
UniRef90	UHGV-0052677_13	UniRef90_A0A1Q6L0U5	311.0	0	SHOCT domain-containing protein	N/A
Pfam	UHGV-0052677_13	PF09851	N/A	N/A	Short C-terminal domain	SHOCT
UniRef90	UHGV-0052677_16	UniRef90_A0A1Q6L177	290.0	0	HTH cro/C1-type domain-containing protein	N/A
Pfam	UHGV-0052677_16	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0052677_16	PF13560,MF_00535,NF041951,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0052677_17	K14059	201.4	0	int; integrase	N/A
PHROG	UHGV-0052677_17	phrog_1	177.2	0	integrase	integration and excision
UniRef90	UHGV-0052677_17	UniRef90_A0A328U998	237.0	0	Site-specific integrase	N/A
eggNOG-mapper	UHGV-0052677_17	1304866.K413DRAFT_1180	215.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0052677_17	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0052677_17	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0052677_17	PF00589,PF12167,MF_02055,NF040815,COG4974	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0052677_18	626523.GCWU000342_00291	50.8	0.00000467	N/A	N/A
Pfam	UHGV-0052677_18	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0052677_18	COG2944	N/A	N/A	DNA-binding transcriptional regulator YiaG, XRE-type HTH domain	N/A
KOfam	UHGV-0052677_20	K01447	55.6	0.0000000000000011	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0052677_20	phrog_15001	126.6	2.1e-37	endolysin	lysis
UniRef90	UHGV-0052677_20	UniRef90_R6U0F7	258.0	0	Putative lipoprotein	N/A
eggNOG-mapper	UHGV-0052677_20	552398.HMPREF0866_01156	162.0	0	Ami_2	N/A
Pfam	UHGV-0052677_20	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
COG	UHGV-0052677_20	COG5632	N/A	N/A	N-acetylmuramoyl-L-alanine amidase CwlA	N/A
PHROG	UHGV-0052677_21	phrog_1129	68.3	7.9e-20	holin	lysis
UniRef90	UHGV-0052677_21	UniRef90_A0A3D4QXE9	140.0	1.79002e-41	Enolase	N/A
eggNOG-mapper	UHGV-0052677_21	742740.HMPREF9474_03522	124.0	5.35e-36	N/A	N/A
Pfam	UHGV-0052677_21	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0052677_21	PF06946	N/A	N/A	N/A	N/A
PHROG	UHGV-0052677_22	phrog_37604	157.7	0	N/A	unknown function
eggNOG-mapper	UHGV-0052677_22	1232443.BAIA02000078_gene10	124.0	6.16e-34	N/A	N/A
structural_annotation	UHGV-0052677_25	PF16640,TIGR04488	N/A	N/A	N/A	N/A
PHROG	UHGV-0052677_26	phrog_372	139.9	1.29998e-41	tail protein	tail
eggNOG-mapper	UHGV-0052677_26	658088.HMPREF0987_01104	74.7	0.0000000000456	the current gene model (or a revised gene model) may contain a frame shift	N/A
Pfam	UHGV-0052677_26	PF05895	N/A	N/A	N/A	DUF859
COG	UHGV-0052677_26	COG4675	N/A	N/A	Phage tail collar domain	N/A
structural_annotation	UHGV-0052677_26	PF05895,MF_04116,NF010681,COG3291	N/A	N/A	N/A	N/A
PHROG	UHGV-0052677_27	phrog_6616	280.2	0	tail protein	tail
UniRef90	UHGV-0052677_27	UniRef90_A0A3D3U8S7	280.0	0	Peptidase S74 domain-containing protein	N/A
eggNOG-mapper	UHGV-0052677_27	33035.JPJF01000043_gene1002	204.0	0	N/A	N/A
structural_annotation	UHGV-0052677_27	PF05113,NF033848,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0052677_28	phrog_1194	62.1	9e-18	N/A	unknown function
Pfam	UHGV-0052677_28	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-0052677_28	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0052677_29	phrog_58	131.1	5.9e-39	tail length tape measure protein	tail
UniRef90	UHGV-0052677_29	UniRef90_A0A1C6JAZ8	120.0	4.17e-24	Phage-related protein	N/A
eggNOG-mapper	UHGV-0052677_29	1232443.BAIA02000078_gene18	105.0	3.91e-20	phage tail tape measure protein	N/A
Pfam	UHGV-0052677_29	PF04513	N/A	N/A	Baculovirus polyhedron envelope protein, PEP, C terminus	Baculo_PEP_C
COG	UHGV-0052677_29	COG1511	N/A	N/A	N/A	N/A
PHROG	UHGV-0052677_30	phrog_706	134.4	7.5e-40	N/A	unknown function
UniRef90	UHGV-0052677_30	UniRef90_A0A1C5M8I2	249.0	0	Bacteriophage Gp15 protein	N/A
eggNOG-mapper	UHGV-0052677_30	411459.RUMOBE_01383	206.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0052677_30	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0052677_30	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0052677_31	phrog_11299	88.1	1e-25	N/A	unknown function
eggNOG-mapper	UHGV-0052677_31	665956.HMPREF1032_03059	67.0	0.00000000000383	N/A	N/A
structural_annotation	UHGV-0052677_31	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-0052677_32	phrog_3099	151.6	4.2039e-45	N/A	unknown function
eggNOG-mapper	UHGV-0052677_32	411902.CLOBOL_00129	187.0	0	N/A	N/A
structural_annotation	UHGV-0052677_32	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0052677_33	phrog_3266	77.9	1.2e-22	tail completion	connector
eggNOG-mapper	UHGV-0052677_33	476272.RUMHYD_01781	174.0	0	N/A	N/A
structural_annotation	UHGV-0052677_33	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0052677_34	phrog_556	73.1	3.1e-21	minor head protein	head and packaging
UniRef90	UHGV-0052677_34	UniRef90_UPI000E4989EB	131.0	5.22e-36	minor capsid protein	N/A
eggNOG-mapper	UHGV-0052677_34	476272.RUMHYD_01780	158.0	0	N/A	N/A
Pfam	UHGV-0052677_34	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0052677_34	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0052677_35	phrog_3366	96.9	1.9e-28	N/A	unknown function
eggNOG-mapper	UHGV-0052677_35	476272.RUMHYD_01779	157.0	0	N/A	N/A
structural_annotation	UHGV-0052677_35	PF20536,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0052677_36	phrog_541	80.7	1.5e-23	head-tail adaptor	connector
eggNOG-mapper	UHGV-0052677_36	1235790.C805_00076	135.0	6.64e-38	N/A	N/A
PHROG	UHGV-0052677_37	phrog_544	147.7	6.16571e-44	major head protein	head and packaging
UniRef90	UHGV-0052677_37	UniRef90_A0A395X7A1	573.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0052677_37	1232453.BAIF02000011_gene3359	388.0	0	N/A	N/A
Pfam	UHGV-0052677_37	PF18316	N/A	N/A	S-layer protein SbsC C-terminal domain	S-l_SbsC_C
structural_annotation	UHGV-0052677_37	PF03864,PF18316,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0052677_38	phrog_194	81.0	2e-23	head scaffolding protein	head and packaging
UniRef90	UHGV-0052677_38	UniRef90_UPI001D14C9C8	130.0	1.51e-34	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-0052677_38	476272.RUMHYD_01775	137.0	8.44e-38	COG NOG36366 non supervised orthologous group	N/A
Pfam	UHGV-0052677_38	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
PHROG	UHGV-0052677_39	phrog_28802	67.0	2.1e-36	N/A	unknown function
eggNOG-mapper	UHGV-0052677_39	476272.RUMHYD_01772	131.0	7.8e-37	N/A	N/A
PHROG	UHGV-0052677_40	phrog_20016	175.1	0	N/A	unknown function
UniRef90	UHGV-0052677_40	UniRef90_A0A2Z4QB67	175.0	0	Carbohydrate binding domain/collagen triple helix repeat protein	N/A
eggNOG-mapper	UHGV-0052677_40	397290.C810_05214	158.0	0	N/A	N/A
structural_annotation	UHGV-0052677_40	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-0052677_41	phrog_16490	201.3	0	N/A	unknown function
eggNOG-mapper	UHGV-0052677_41	658655.HMPREF0988_00917	199.0	0	N/A	N/A
PHROG	UHGV-0052677_42	phrog_22984	77.7	1.3e-22	N/A	unknown function
PHROG	UHGV-0052677_43	phrog_21718	92.7	3.5e-27	N/A	unknown function
eggNOG-mapper	UHGV-0052677_43	397290.C810_05210	94.7	9.17e-23	N/A	N/A
PHROG	UHGV-0052677_44	phrog_3754	107.8	9.1e-32	N/A	unknown function
eggNOG-mapper	UHGV-0052677_44	476272.RUMHYD_01764	202.0	0	N/A	N/A
PHROG	UHGV-0052677_45	phrog_3675	86.7	1.7e-25	N/A	unknown function
UniRef90	UHGV-0052677_45	UniRef90_R6NR22	88.6	1.1e-20	YjcQ protein	N/A
eggNOG-mapper	UHGV-0052677_45	936375.HMPREF1152_1073	85.5	3.18e-20	YjcQ protein	N/A
Pfam	UHGV-0052677_45	PF09639	N/A	N/A	YjcQ protein	YjcQ
structural_annotation	UHGV-0052677_45	PF09639,TIGR04176,COG2345	N/A	N/A	N/A	N/A
PHROG	UHGV-0052677_47	phrog_581	240.6	0	minor head protein	head and packaging
UniRef90	UHGV-0052677_47	UniRef90_A0A1C5M9T1	429.0	0	Phage minor capsid protein 2	N/A
eggNOG-mapper	UHGV-0052677_47	476272.RUMHYD_01761	366.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-0052677_47	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0052677_47	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0052677_47	PF06152,TIGR01641	N/A	N/A	N/A	N/A
PHROG	UHGV-0052677_48	phrog_533	276.0	0	portal protein	head and packaging
UniRef90	UHGV-0052677_48	UniRef90_A0A1C5MB20	533.0	0	Phage portal protein, putative, A118 family	N/A
eggNOG-mapper	UHGV-0052677_48	33035.JPJF01000106_gene3135	426.0	0	phage minor capsid protein	N/A
structural_annotation	UHGV-0052677_48	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0052677_49	K06909	422.0	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0052677_49	phrog_3717	187.9	0	terminase large subunit	head and packaging
UniRef90	UHGV-0052677_49	UniRef90_A0A1C7I418	593.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0052677_49	33035.JPJF01000106_gene3136	597.0	0	Terminase small subunit	N/A
Pfam	UHGV-0052677_49	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-0052677_49	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-0052677_49	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0052677_49	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0052677_49	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0052677_51	phrog_5057	84.7	7.8e-25	N/A	unknown function
KOfam	UHGV-0052677_52	K03497	71.9	1.4e-20	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	N/A
PHROG	UHGV-0052677_52	phrog_940	295.1	0	nuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0052677_52	UniRef90_UPI001C389DC7	377.0	0	N/A	N/A
eggNOG-mapper	UHGV-0052677_52	1232449.BAHV02000018_gene1534	249.0	0	N/A	N/A
PADLOC	UHGV-0052677_52	MTase_II_00015	83.2	4.1e-24	Type II methyltransferase	RM
Pfam	UHGV-0052677_52	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
Pfam	UHGV-0052677_52	PF14386	N/A	N/A	N/A	DUF4417
COG	UHGV-0052677_52	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-0052677_52	PF14386,PF02195,TIGR00180	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0052677_56	318464.IO99_07375	77.8	2.45e-17	N/A	N/A
PHROG	UHGV-0052677_60	phrog_478	119.1	2.1e-35	site-specific recombination directionality factor RDF	integration and excision
UniRef90	UHGV-0052677_60	UniRef90_A0A373Q857	164.0	0	YopX domain-containing protein	N/A
eggNOG-mapper	UHGV-0052677_60	1497679.EP56_15100	88.2	9.74e-21	N/A	N/A
KOfam	UHGV-0052677_62	K00390	65.7	3.9e-19	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	N/A
PHROG	UHGV-0052677_62	phrog_424	136.8	4.30002e-41	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0052677_62	UniRef90_A0A3D4KZM8	339.0	0	PAPS_reduct domain-containing protein	N/A
eggNOG-mapper	UHGV-0052677_62	665956.HMPREF1032_00140	285.0	0	Phosphoadenosine phosphosulfate reductase family	N/A
Pfam	UHGV-0052677_62	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
Pfam	UHGV-0052677_62	PF13392	N/A	N/A	HNH endonuclease	HNH_3
COG	UHGV-0052677_62	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
PHROG	UHGV-0052677_63	phrog_9804	103.2	2.5e-30	N/A	unknown function
UniRef90	UHGV-0052677_63	UniRef90_UPI00189C0C42	99.4	1.33e-22	replicative helicase loader/inhibitor	N/A
eggNOG-mapper	UHGV-0052677_63	1121344.JHZO01000003_gene981	103.0	3.5e-25	Loader and inhibitor of phage G40P	N/A
Pfam	UHGV-0052677_63	PF11417	N/A	N/A	Loader and inhibitor of phage G40P	Inhibitor_G39P
structural_annotation	UHGV-0052677_63	PF11417	N/A	N/A	N/A	N/A
PHROG	UHGV-0052677_64	phrog_20437	228.2	0	DNA replication initiation	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0052677_64	UniRef90_R6M2T8	323.0	0	N/A	N/A
eggNOG-mapper	UHGV-0052677_64	755731.Clo1100_1141	164.0	0	N/A	N/A
Pfam	UHGV-0052677_64	PF14297	N/A	N/A	Lin1244/Lin1753-like, N-terminal	Lin1244_N
COG	UHGV-0052677_64	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0052677_64	PF14297	N/A	N/A	N/A	N/A
KOfam	UHGV-0052677_65	K03111	126.1	4.6e-37	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0052677_65	phrog_44	138.7	3.69999e-41	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0052677_65	UniRef90_A0A1Q6S9C1	142.0	1.22e-40	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0052677_65	1235835.C814_01372	124.0	2.82e-34	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-0052677_65	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0052677_65	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0052677_65	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0052677_65	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0052677_65	PF00436,MF_00984,NF005579,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0052677_66	phrog_4973	52.6	0.0000000000000073	N/A	unknown function
Pfam	UHGV-0052677_66	PF14090	N/A	N/A	Helix-turn-helix domain	HTH_39
structural_annotation	UHGV-0052677_66	PF14090,NF040939,COG4738	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0052677_67	PF13969	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0052677	Yes	42,160	50	95	1
UHGV-1389498	No	42,160	50	95	1
UHGV-2131907	No	29,992	52	68	1