vOTU vOTU-081014

vOTU: vOTU-081014

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-081014
Number of genomes	2
Taxonomy (ICTV)	Bacteria → Bacteroidota → Bacteroidia → Bacteroidales → Marinifilaceae → Odoribacter → ERR7745951_bin.46
Taxonomy (UHGV)	vFAM-00157 → vSUBFAM-01852 → vGENUS-02398 → vSUBGEN-35209 → vOTU-081014
Host lineage	Bacteria → Firmicutes_A → Clostridia → Christensenellales → CAG-74 → SFTH01 → ERR7745963_bin.54
Host range breadth	Species
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0030767
Biosample ID	SAMEA4765718
Genome length (bp)	46,900 bps
CheckV completeness	99.90% (High-quality)
CDS count	83
CDS density	91.96%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Christensenellales → CAG-74 → SFTH01 → ERR7745963_bin.54	Total connections	21	Host agreement	80.95
PHIST-predicted host lineage	Bacteria → Bacteroidota → Bacteroidia → Bacteroidales → Marinifilaceae → Odoribacter → ERR7745951_bin.46	Total connections	1	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 99.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0030767_1	K24213	46.5	0.00000000000041	C1QTNF9; complement C1q and tumor necrosis factor-related protein 9	N/A
PHROG	UHGV-0030767_1	phrog_27197	64.2	2.3e-18	N/A	unknown function
eggNOG-mapper	UHGV-0030767_1	445970.ALIPUT_01221	86.3	1.99e-17	DNA-templated transcription, initiation	N/A
Pfam	UHGV-0030767_1	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
COG	UHGV-0030767_1	COG1595	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	N/A
structural_annotation	UHGV-0030767_1	NF007410	N/A	N/A	N/A	N/A
PHROG	UHGV-0030767_3	phrog_2872	178.6	0	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0030767_3	UniRef90_R6SKG3	272.0	0	AAA domain-containing protein	N/A
eggNOG-mapper	UHGV-0030767_3	1304866.K413DRAFT_0827	252.0	0	AAA domain	N/A
Pfam	UHGV-0030767_3	PF13479	N/A	N/A	AAA domain	AAA_24
structural_annotation	UHGV-0030767_3	PF13479,MF_00350,TIGR01618,COG0468	N/A	N/A	N/A	N/A
PHROG	UHGV-0030767_4	phrog_18107	111.6	8.1e-33	N/A	unknown function
UniRef90	UHGV-0030767_4	UniRef90_UPI00058F46CC	129.0	2.61e-34	N/A	N/A
eggNOG-mapper	UHGV-0030767_4	476272.RUMHYD_01739	82.4	6.01e-17	N/A	N/A
Pfam	UHGV-0030767_4	PF05037	N/A	N/A	N/A	DUF669
structural_annotation	UHGV-0030767_4	PF05037	N/A	N/A	N/A	N/A
PHROG	UHGV-0030767_5	phrog_253	115.6	3.7e-34	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0030767_5	UniRef90_E5DV79	91.3	3.3e-20	Gp157-like protein	N/A
eggNOG-mapper	UHGV-0030767_5	749413.E5DV79_9VIRU	91.3	5.53e-21	Siphovirus Gp157	N/A
Pfam	UHGV-0030767_5	PF05565	N/A	N/A	Siphovirus Gp157	Sipho_Gp157
structural_annotation	UHGV-0030767_5	PF05565,NF002139	N/A	N/A	N/A	N/A
PHROG	UHGV-0030767_6	phrog_4973	66.3	4.1e-19	N/A	unknown function
UniRef90	UHGV-0030767_6	UniRef90_UPI001C21AA1A	72.4	0.00000000000000508	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0030767_6	205914.HS_1403	55.8	0.0000000033	Helix-turn-helix domain	N/A
Pfam	UHGV-0030767_6	PF14090	N/A	N/A	Helix-turn-helix domain	HTH_39
PHROG	UHGV-0030767_7	phrog_6969	88.1	9.3e-26	N/A	unknown function
UniRef90	UHGV-0030767_7	UniRef90_A0A285PT73	110.0	2.41e-25	Helix-turn-helix domain	N/A
eggNOG-mapper	UHGV-0030767_7	1232446.BAIE02000002_gene816	112.0	1.59e-27	N/A	N/A
structural_annotation	UHGV-0030767_7	TIGR01714	N/A	N/A	N/A	N/A
KOfam	UHGV-0030767_8	K02315	109.4	4.3e-32	dnaC; DNA replication protein DnaC	N/A
PHROG	UHGV-0030767_8	phrog_50	112.2	5.4e-33	DnaC-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0030767_8	UniRef90_A0A349YQ92	208.0	0	IstB_IS21 domain-containing protein	N/A
eggNOG-mapper	UHGV-0030767_8	445972.ANACOL_01829	190.0	0	N/A	N/A
Pfam	UHGV-0030767_8	PF00308	N/A	N/A	Bacterial dnaA protein	Bac_DnaA
COG	UHGV-0030767_8	COG1484	N/A	N/A	DNA replication protein DnaC	N/A
structural_annotation	UHGV-0030767_8	PF01695,MF_01158,NF005378,COG1484	N/A	N/A	N/A	N/A
KOfam	UHGV-0030767_9	K01160	60.2	5.8e-17	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-0030767_9	phrog_34	59.3	7.7e-17	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0030767_9	UniRef90_A0A371IJT7	159.0	0	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-0030767_9	796940.HMPREF9628_00163	154.0	0	Endodeoxyribonuclease RusA	N/A
Pfam	UHGV-0030767_9	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-0030767_9	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-0030767_9	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
PHROG	UHGV-0030767_14	phrog_24386	255.0	0	N/A	unknown function
eggNOG-mapper	UHGV-0030767_14	742740.HMPREF9474_02291	218.0	0	phosphatase activity	N/A
COG	UHGV-0030767_14	COG0561	N/A	N/A	Hydroxymethylpyrimidine pyrophosphatase and other HAD family phosphatases	N/A
PHROG	UHGV-0030767_15	phrog_599	41.6	0.000000000024	Lar-like restriction alleviation protein	moron, auxiliary metabolic gene and host takeover
eggNOG-mapper	UHGV-0030767_15	97139.C824_00027	48.5	0.00000171	Restriction alleviation protein Lar	N/A
Pfam	UHGV-0030767_15	PF14354	N/A	N/A	Restriction alleviation protein Lar	Lar_restr_allev
dbAPIS	UHGV-0030767_15	APIS033	N/A	N/A	Lar is functionally similar to RaI, is able to alleviate restriction and enhance modification by EcoKI. And the nucleotide sequences of their genes share 47% identity, indicating a common origin.	N/A
structural_annotation	UHGV-0030767_15	PF05223,NF003262	N/A	N/A	N/A	N/A
KOfam	UHGV-0030767_18	K00390	48.3	2.3e-22	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	N/A
PHROG	UHGV-0030767_18	phrog_424	107.2	1.3e-31	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0030767_18	UniRef90_A0A3D2CNF7	315.0	0	Phosphoadenosine phosphosulfate reductase	N/A
eggNOG-mapper	UHGV-0030767_18	1291050.JAGE01000001_gene2907	287.0	0	Phosphoadenosine phosphosulfate reductase	N/A
Pfam	UHGV-0030767_18	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-0030767_18	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-0030767_18	PF01507,MF_00063,NF010369,COG0175	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0030767_22	NF033716	N/A	N/A	N/A	N/A
UniRef90	UHGV-0030767_24	UniRef90_UPI00156F5677	254.0	0	thymidylate synthase ThyX	N/A
eggNOG-mapper	UHGV-0030767_24	1235793.C809_02394	243.0	0	N/A	N/A
Pfam	UHGV-0030767_24	PF02511	N/A	N/A	Thymidylate synthase complementing protein	Thy1
structural_annotation	UHGV-0030767_24	PF02511,MF_01408,TIGR02170,COG1351	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0030767_25	PF18892	N/A	N/A	N/A	N/A
PHROG	UHGV-0030767_28	phrog_36	51.7	0.000000000000016	transcriptional regulator	transcription regulation
eggNOG-mapper	UHGV-0030767_28	1410624.JNKK01000051_gene2469	67.0	0.00000000000564	sigma factor activity	N/A
COG	UHGV-0030767_28	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
COG	UHGV-0030767_31	COG2214	N/A	N/A	Curved DNA-binding protein CbpA, contains a DnaJ-like domain	N/A
UniRef90	UHGV-0030767_34	UniRef90_A0A0F0C267	83.6	2.6e-16	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0030767_34	1235793.C809_00539	66.2	0.0000000000425	N/A	N/A
structural_annotation	UHGV-0030767_34	PF16677	N/A	N/A	N/A	N/A
PHROG	UHGV-0030767_35	phrog_38	181.3	0	terminase large subunit	head and packaging
UniRef90	UHGV-0030767_35	UniRef90_UPI000419A6BC	402.0	0	phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0030767_35	1121866.AUGK01000003_gene1428	402.0	0	chromosome segregation	N/A
COG	UHGV-0030767_35	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0030767_35	PF17289,PF02562,MF_04147,NF033889,COG5362,COG5410	N/A	N/A	N/A	N/A
PHROG	UHGV-0030767_36	phrog_64	227.6	0	portal protein	head and packaging
UniRef90	UHGV-0030767_36	UniRef90_UPI001D08CF6B	371.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-0030767_36	1121866.AUGK01000003_gene1429	301.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0030767_36	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0030767_36	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0030767_37	phrog_115	41.3	0.000000000024	minor head protein	head and packaging
UniRef90	UHGV-0030767_37	UniRef90_A0A3D3Y4T2	126.0	1.46e-32	Phage_Mu_F domain-containing protein	N/A
Pfam	UHGV-0030767_37	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
NCBIFam	UHGV-0030767_37	TIGR01641.1	N/A	N/A	minor capsid protein	N/A
COG	UHGV-0030767_37	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0030767_37	PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-0030767_39	phrog_1328	117.6	7.7e-35	major head protein	head and packaging
UniRef90	UHGV-0030767_39	UniRef90_UPI00164DD2D5	482.0	0	N/A	N/A
eggNOG-mapper	UHGV-0030767_39	398512.JQKC01000052_gene2672	215.0	0	N/A	N/A
Pfam	UHGV-0030767_39	PF17236	N/A	N/A	N/A	DUF5309
structural_annotation	UHGV-0030767_39	PF17236,MF_04119,NF041162,COG4653	N/A	N/A	N/A	N/A
UniRef90	UHGV-0030767_40	UniRef90_A0A374HKI7	101.0	1.24e-25	DNA-packaging protein	N/A
Pfam	UHGV-0030767_40	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
structural_annotation	UHGV-0030767_40	TIGR01560	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0030767_41	1121866.AUGK01000003_gene1432	55.1	0.0000000632	N/A	N/A
structural_annotation	UHGV-0030767_43	PF06141,TIGR02367,COG3167	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0030767_44	1298920.KI911353_gene2652	166.0	0	N/A	N/A
structural_annotation	UHGV-0030767_44	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
UniRef90	UHGV-0030767_45	UniRef90_UPI001D0975F6	85.5	3.84e-19	N/A	N/A
PHROG	UHGV-0030767_47	phrog_1535	99.9	3.4e-30	tail length tape measure protein	tail
eggNOG-mapper	UHGV-0030767_47	1123263.AUKY01000015_gene1620	103.0	2.09e-19	Phage tail tape measure protein TP901	N/A
COG	UHGV-0030767_47	COG5280	N/A	N/A	Phage-related minor tail protein	N/A
PHROG	UHGV-0030767_48	phrog_1194	104.5	5.9e-31	N/A	unknown function
UniRef90	UHGV-0030767_48	UniRef90_A0A0L8EWZ8	90.9	4.44e-21	N/A	N/A
eggNOG-mapper	UHGV-0030767_48	1229517.AMFD01000023_gene1305	92.0	3.09e-22	N/A	N/A
Pfam	UHGV-0030767_48	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-0030767_48	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0030767_49	phrog_6616	150.3	1.12104e-44	tail protein	tail
eggNOG-mapper	UHGV-0030767_49	1262449.CP6013_3213	98.2	6.14e-18	Phage minor structural protein	N/A
COG	UHGV-0030767_49	COG4733	N/A	N/A	Phage-related protein, tail protein J	N/A
structural_annotation	UHGV-0030767_52	PF00927,PF03422,MF_04116,NF040680,COG4326	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0030767_53	PF16640	N/A	N/A	N/A	N/A
PHROG	UHGV-0030767_55	phrog_13589	45.9	1e-27	N/A	unknown function
eggNOG-mapper	UHGV-0030767_55	411471.SUBVAR_06929	339.0	0	ATPase involved in DNA repair	N/A
COG	UHGV-0030767_55	COG0419	N/A	N/A	DNA repair exonuclease SbcCD ATPase subunit	N/A
KOfam	UHGV-0030767_57	K00571	163.7	0	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	N/A
PHROG	UHGV-0030767_57	phrog_67	164.9	0	DNA methyltransferase	other
UniRef90	UHGV-0030767_57	UniRef90_A0A401IT16	201.0	0	Methyltransferase	N/A
eggNOG-mapper	UHGV-0030767_57	1541883.A0A088FRS2_9CAUD	181.0	0	N-methyltransferase activity	N/A
PADLOC	UHGV-0030767_57	MTase_II_00037	187.8	0	Type II methyltransferase	RM
Pfam	UHGV-0030767_57	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
PHROG	UHGV-0030767_58	phrog_14030	118.0	4.6e-35	N/A	unknown function
UniRef90	UHGV-0030767_58	UniRef90_A0A416FZN6	179.0	0	PG_binding_1 domain-containing protein	N/A
eggNOG-mapper	UHGV-0030767_58	411461.DORFOR_00720	150.0	8.36996e-41	N/A	N/A
Pfam	UHGV-0030767_58	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
Pfam	UHGV-0030767_58	PF08239	N/A	N/A	Bacterial SH3 domain	SH3_3
structural_annotation	UHGV-0030767_58	PF01471,PF18342,TIGR02869,TIGR04457,COG4991	N/A	N/A	N/A	N/A
PHROG	UHGV-0030767_59	phrog_937	56.0	7.8e-16	hemolysin	other
eggNOG-mapper	UHGV-0030767_60	1499683.CCFF01000016_gene802	49.7	0.00000715	N/A	N/A
structural_annotation	UHGV-0030767_64	PF07878,NF041264,COG4710	N/A	N/A	N/A	N/A
KOfam	UHGV-0030767_70	K14059	225.5	0	int; integrase	N/A
PHROG	UHGV-0030767_70	phrog_1	183.2	0	integrase	integration and excision
UniRef90	UHGV-0030767_70	UniRef90_UPI001C0F402D	138.0	9.96e-34	site-specific integrase	N/A
eggNOG-mapper	UHGV-0030767_70	1294142.CINTURNW_1001	110.0	3.67e-24	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0030767_70	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-0030767_70	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0030767_70	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0030767_70	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0030767_72	PF19818,TIGR03931	N/A	N/A	N/A	N/A
Pfam	UHGV-0030767_73	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
UniRef90	UHGV-0030767_75	UniRef90_A0A3R6ILK5	73.2	0.0000000000000445	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0030767_75	1507.HMPREF0262_01301	57.8	0.00000000665	Cro/C1-type HTH DNA-binding domain	N/A
UniRef90	UHGV-0030767_76	UniRef90_A0A417ABT7	63.9	0.00000000000572	DNA-binding protein	N/A
eggNOG-mapper	UHGV-0030767_76	1219626.HMPREF1639_07045	54.3	0.00000000551	N/A	N/A
structural_annotation	UHGV-0030767_76	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-0030767_80	phrog_23707	45.6	0.00000000000097	N/A	unknown function
eggNOG-mapper	UHGV-0030767_80	411470.RUMGNA_00214	70.5	0.000000000000255	N/A	N/A
Pfam	UHGV-0030767_80	PF10263	N/A	N/A	SprT-like family	SprT-like
structural_annotation	UHGV-0030767_80	PF08325,COG4900	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0030767_82	PF12728,NF040990	N/A	N/A	N/A	N/A
PHROG	UHGV-0030767_83	phrog_4433	74.2	1.9e-21	N/A	unknown function
eggNOG-mapper	UHGV-0030767_83	886882.PPSC2_p0363	94.4	1.2e-20	regulation of DNA-templated transcription, elongation	N/A
COG	UHGV-0030767_83	COG5164	N/A	N/A	Transcription elongation factor SPT5	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0030767	Yes	46,900	50	100	1
UHGV-0186978	No	20,401	50	45	1