vOTU vOTU-081516

vOTU: vOTU-081516

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-081516
Number of genomes	2
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-103
Taxonomy (UHGV)	vFAM-00005 → vSUBFAM-00581 → vGENUS-00476 → vSUBGEN-31246 → vOTU-081516
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-103
Host range breadth	Genus
Lifestyle	lytic (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0036897
Biosample ID	N/A
Genome length (bp)	40,662 bps
CheckV completeness	98.06% (High-quality)
CDS count	40
CDS density	95.83%
tRNA count	1
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-103	Total connections	227	Host agreement	94.27
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-103	Total connections	3	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 98.06)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-0036897_1	411462.DORLON_01626	587.0	0	Protein conserved in bacteria	N/A
Pfam	UHGV-0036897_1	PF16640	N/A	N/A	Bacterial Ig-like domain (group 3)	Big_3_5
COG	UHGV-0036897_1	COG2911	N/A	N/A	Autotransporter translocation and assembly protein TamB	N/A
PHROG	UHGV-0036897_2	phrog_1129	61.2	1.3e-17	holin	lysis
UniRef90	UHGV-0036897_2	UniRef90_A0A8J6J3M3	101.0	2.03e-26	Phage holin family protein	N/A
eggNOG-mapper	UHGV-0036897_2	742740.HMPREF9474_03522	97.4	1.66e-25	N/A	N/A
Pfam	UHGV-0036897_2	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0036897_2	PF06946	N/A	N/A	N/A	N/A
PHROG	UHGV-0036897_3	phrog_4105	76.3	3.3e-22	N/A	unknown function
eggNOG-mapper	UHGV-0036897_3	592026.GCWU0000282_003290	88.6	1.73e-21	N/A	N/A
KOfam	UHGV-0036897_4	K01447	81.1	1.9e-23	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0036897_4	phrog_5182	155.5	0	endolysin	lysis
UniRef90	UHGV-0036897_4	UniRef90_R5AZE6	219.0	0	N-acetylmuramoyl-L-alanine amidase family 2	N/A
eggNOG-mapper	UHGV-0036897_4	397288.C806_00777	212.0	0	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase	N/A
Pfam	UHGV-0036897_4	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
COG	UHGV-0036897_4	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0036897_4	PF01510,MF_04111,COG5632	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0036897_5	411473.RUMCAL_00420	60.8	0.000000818	nuclear chromosome segregation	N/A
COG	UHGV-0036897_5	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
structural_annotation	UHGV-0036897_6	PF20622,NF033814,COG2372	N/A	N/A	N/A	N/A
PHROG	UHGV-0036897_7	phrog_22978	727.2	0	N/A	unknown function
UniRef90	UHGV-0036897_7	UniRef90_R5G452	445.0	0	PBECR5 domain-containing protein	N/A
eggNOG-mapper	UHGV-0036897_7	1410650.JHWL01000003_gene2814	353.0	0	N/A	N/A
Pfam	UHGV-0036897_7	PF18760	N/A	N/A	ADP-Ribosyltransferase in polyvalent proteins	ART-PolyVal
eggNOG-mapper	UHGV-0036897_8	1410650.JHWL01000003_gene2815	115.0	6.07e-25	N/A	N/A
structural_annotation	UHGV-0036897_9	PF00629,NF033675	N/A	N/A	N/A	N/A
PHROG	UHGV-0036897_11	phrog_38190	69.6	1.2e-20	N/A	unknown function
eggNOG-mapper	UHGV-0036897_11	411473.RUMCAL_00420	69.3	0.00000000013	nuclear chromosome segregation	N/A
COG	UHGV-0036897_11	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
PHROG	UHGV-0036897_13	phrog_511	179.4	0	internal virion protein	head and packaging
eggNOG-mapper	UHGV-0036897_13	1410650.JHWL01000003_gene2827	255.0	0	N/A	N/A
structural_annotation	UHGV-0036897_13	PF11134,TIGR03300,NF038126,COG1520	N/A	N/A	N/A	N/A
PHROG	UHGV-0036897_14	phrog_12105	129.5	1.4e-38	N/A	unknown function
eggNOG-mapper	UHGV-0036897_14	1226322.HMPREF1545_03850	87.4	1.71e-20	N/A	N/A
PHROG	UHGV-0036897_15	phrog_15239	51.0	0.000000000000022	N/A	unknown function
PHROG	UHGV-0036897_16	phrog_1357	217.9	0	major head protein	head and packaging
UniRef90	UHGV-0036897_16	UniRef90_A0A2V2CFL5	625.0	0	N4-gp56 family major capsid protein	N/A
eggNOG-mapper	UHGV-0036897_16	1410650.JHWL01000003_gene2830	274.0	0	N/A	N/A
NCBIFam	UHGV-0036897_16	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-0036897_16	PF13252,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0036897_17	phrog_13908	191.1	0	N/A	unknown function
eggNOG-mapper	UHGV-0036897_17	1410650.JHWL01000003_gene2831	120.0	1.02e-28	N/A	N/A
KOfam	UHGV-0036897_18	K07584	41.5	0.000000000019	N/A	N/A
PHROG	UHGV-0036897_18	phrog_4478	49.9	0.000000000000027	peptidase	other
eggNOG-mapper	UHGV-0036897_18	521098.Aaci_1816	48.5	0.00000842	Cysteine protease Prp	N/A
Pfam	UHGV-0036897_18	PF04327	N/A	N/A	Cysteine protease Prp	Peptidase_Prp
COG	UHGV-0036897_18	COG2868	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0036897_18	PF04327,NF011124,COG2868	N/A	N/A	N/A	N/A
PHROG	UHGV-0036897_19	phrog_156	297.6	0	portal protein	head and packaging
eggNOG-mapper	UHGV-0036897_19	1410650.JHWL01000003_gene2833	523.0	0	N/A	N/A
structural_annotation	UHGV-0036897_19	PF16510,MF_04120,TIGR01538,COG5518	N/A	N/A	N/A	N/A
KOfam	UHGV-0036897_20	K06909	119.3	3.8e-35	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0036897_20	phrog_979	118.9	6.9e-37	terminase large subunit	head and packaging
UniRef90	UHGV-0036897_20	UniRef90_A0A810Q5R0	619.0	0	Phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0036897_20	1410650.JHWL01000003_gene2834	563.0	0	N/A	N/A
Pfam	UHGV-0036897_20	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-0036897_20	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0036897_20	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0036897_21	phrog_1206	40.1	0.0000000000084	terminase small subunit	head and packaging
UniRef90	UHGV-0036897_23	UniRef90_UPI00164AED9E	85.5	2.04e-19	helix-turn-helix domain-containing protein	N/A
COG	UHGV-0036897_23	COG2944	N/A	N/A	DNA-binding transcriptional regulator YiaG, XRE-type HTH domain	N/A
structural_annotation	UHGV-0036897_23	NF040522,COG2944	N/A	N/A	N/A	N/A
PHROG	UHGV-0036897_24	phrog_6160	128.6	5.4e-38	N/A	unknown function
eggNOG-mapper	UHGV-0036897_24	37105.F8J1D6_9CAUD	105.0	3.12e-23	N/A	N/A
KOfam	UHGV-0036897_26	K01160	59.3	1.1e-16	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-0036897_26	phrog_1682	80.0	3.3e-23	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0036897_26	UniRef90_A0A174WGH7	124.0	9.17e-34	Holliday junction resolvase	N/A
eggNOG-mapper	UHGV-0036897_26	1235790.C805_00029	117.0	1.58e-32	Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC	N/A
COG	UHGV-0036897_26	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-0036897_26	PF19595,NF007305,COG4570	N/A	N/A	N/A	N/A
PHROG	UHGV-0036897_27	phrog_474	99.6	4.9e-29	phosphofructokinase	other
UniRef90	UHGV-0036897_27	UniRef90_A0A2V2FHD6	112.0	4.02e-29	N/A	N/A
eggNOG-mapper	UHGV-0036897_27	1203606.HMPREF1526_00237	97.1	6.59e-24	N/A	N/A
Pfam	UHGV-0036897_27	PF19905	N/A	N/A	N/A	DUF6378
structural_annotation	UHGV-0036897_27	PF19905	N/A	N/A	N/A	N/A
PHROG	UHGV-0036897_30	phrog_3392	110.3	1.7e-32	N/A	unknown function
UniRef90	UHGV-0036897_30	UniRef90_R7NB62	82.4	9.3e-17	Putative phage protein	N/A
eggNOG-mapper	UHGV-0036897_30	1217710.F969_00044	114.0	5.07e-28	N/A	N/A
PHROG	UHGV-0036897_31	phrog_424	103.0	3.3e-30	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0036897_31	UniRef90_UPI001C3EFA65	302.0	0	phosphoadenosine phosphosulfate reductase	N/A
eggNOG-mapper	UHGV-0036897_31	742740.HMPREF9474_01224	163.0	4.62428e-44	N/A	N/A
PADLOC	UHGV-0036897_31	SspD_00001	67.9	3e-19	SspD	SSP
COG	UHGV-0036897_31	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-0036897_31	PF01507,MF_01161,NF005316,COG1606	N/A	N/A	N/A	N/A
PHROG	UHGV-0036897_34	phrog_9474	125.8	3.8e-37	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0036897_34	UniRef90_A0A1I7FTR4	118.0	7.19e-28	DnaD and phage-associated domain-containing protein	N/A
eggNOG-mapper	UHGV-0036897_34	644966.Tmar_0029	109.0	1.13e-24	HNH endonuclease	N/A
COG	UHGV-0036897_34	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
KOfam	UHGV-0036897_35	K03111	140.4	1.90002e-41	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0036897_35	phrog_44	134.6	7e-40	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0036897_35	UniRef90_A0A1Y4M5T6	184.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0036897_35	1226322.HMPREF1545_04080	179.0	0	Single-strand binding protein family	N/A
Pfam	UHGV-0036897_35	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0036897_35	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0036897_35	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0036897_35	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0036897_35	PF00436,MF_00984,NF005242,COG0629	N/A	N/A	N/A	N/A
KOfam	UHGV-0036897_36	K07455	174.3	0	recT; recombination protein RecT	N/A
PHROG	UHGV-0036897_36	phrog_148	166.9	0	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0036897_36	UniRef90_A0A7X7Z0P1	320.0	0	Recombinase RecT	N/A
eggNOG-mapper	UHGV-0036897_36	1591073.A0A0B5D0I3_9CAUD	188.0	0	DNA metabolic process	N/A
Pfam	UHGV-0036897_36	PF03837	N/A	N/A	RecT family	RecT
NCBIFam	UHGV-0036897_36	TIGR00616.1	N/A	N/A	recombinase, phage RecT family	N/A
structural_annotation	UHGV-0036897_36	PF03837,TIGR00616,COG3723	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0036897_37	PF12844,MF_00535,NF041951,COG5499	N/A	N/A	N/A	N/A
PHROG	UHGV-0036897_38	phrog_434	318.9	0	RecE-like recombination exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0036897_38	UniRef90_A0A1Y4L975	296.0	0	YqaJ domain-containing protein	N/A
eggNOG-mapper	UHGV-0036897_38	1121344.JHZO01000003_gene985	279.0	0	YqaJ viral recombinase family	N/A
Pfam	UHGV-0036897_38	PF09588	N/A	N/A	YqaJ-like viral recombinase domain	YqaJ
NCBIFam	UHGV-0036897_38	TIGR03033.1	N/A	N/A	putative phage-type endonuclease	N/A
COG	UHGV-0036897_38	COG5377	N/A	N/A	Phage-related protein, predicted endonuclease	N/A
structural_annotation	UHGV-0036897_38	PF09588,MF_03030,TIGR03033,COG5377	N/A	N/A	N/A	N/A
KOfam	UHGV-0036897_40	K00558	78.1	3.1e-30	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-0036897_40	phrog_116	108.7	5.29971e-42	DNA methyltransferase	other
UniRef90	UHGV-0036897_40	UniRef90_A0A1C5KYC3	240.0	0	DNA (cytosine-5-)-methyltransferase	N/A
eggNOG-mapper	UHGV-0036897_40	718252.FP2_16350	227.0	0	C-5 cytosine-specific DNA methylase	N/A
PADLOC	UHGV-0036897_40	oMTase_00004	58.5	3.9e-35	orphan methyltransferase	RM
Pfam	UHGV-0036897_40	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
COG	UHGV-0036897_40	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-0036897_40	PF00145,TIGR00675	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0036897	Yes	40,662	60	98	1
UHGV-1558175	No	11,276	63	27	1