vOTU vOTU-081525

vOTU: vOTU-081525

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-081525
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00022 → vSUBFAM-05016 → vGENUS-09942 → vSUBGEN-12406 → vOTU-081525
Host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Acetatifactor → Acetatifactor sp900066565
Host range breadth	Species
Lifestyle	temperate (evidence: integrase)

Representative genome
Genome ID	UHGV-1395137
Biosample ID	SAMN02333950
Genome length (bp)	29,362 bps
CheckV completeness	99.90% (High-quality)
CDS count	49
CDS density	95.75%
tRNA count	1
Integrase	Yes
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Acetatifactor → Acetatifactor sp900066565	Total connections	24	Host agreement	70.83
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 99.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1395137_1	phrog_119	65.3	9.5e-19	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1395137_1	UniRef90_UPI0005937579	124.0	2.21e-35	HNH endonuclease	N/A
eggNOG-mapper	UHGV-1395137_1	887929.HMP0721_1270	105.0	1.98e-28	HNH nucleases	N/A
Pfam	UHGV-1395137_1	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-1395137_1	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-1395137_3	PF16535,PF04545	N/A	N/A	N/A	N/A
KOfam	UHGV-1395137_4	K01160	49.3	0.00000000000014	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-1395137_4	phrog_1682	69.9	4.3e-20	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1395137_4	UniRef90_UPI001BC1CA28	121.0	6.14e-33	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-1395137_4	1235790.C805_00029	111.0	5.05e-30	Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC	N/A
COG	UHGV-1395137_4	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-1395137_4	PF19595,NF007305,COG4570	N/A	N/A	N/A	N/A
PHROG	UHGV-1395137_6	phrog_15768	70.7	2.4e-21	N/A	unknown function
Pfam	UHGV-1395137_6	PF19808	N/A	N/A	N/A	DUF6291
structural_annotation	UHGV-1395137_6	PF19808	N/A	N/A	N/A	N/A
PHROG	UHGV-1395137_7	phrog_18107	108.8	5.9e-32	N/A	unknown function
eggNOG-mapper	UHGV-1395137_7	397290.C810_05167	111.0	7.83e-28	N/A	N/A
structural_annotation	UHGV-1395137_7	PF05037	N/A	N/A	N/A	N/A
Pfam	UHGV-1395137_8	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
PHROG	UHGV-1395137_9	phrog_2872	145.5	2.8026e-43	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1395137_9	UniRef90_A0A3E2WAL4	246.0	0	ATP-binding protein	N/A
eggNOG-mapper	UHGV-1395137_9	1304866.K413DRAFT_0827	206.0	0	AAA domain	N/A
Pfam	UHGV-1395137_9	PF13479	N/A	N/A	AAA domain	AAA_24
structural_annotation	UHGV-1395137_9	PF13479,MF_00350,TIGR01618,COG0468	N/A	N/A	N/A	N/A
KOfam	UHGV-1395137_12	K03497	132.1	7.3e-39	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	N/A
PHROG	UHGV-1395137_12	phrog_6218	212.0	0	ParB-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1395137_12	UniRef90_A0A7X5CC58	219.0	0	ParB/RepB/Spo0J family partition protein	N/A
eggNOG-mapper	UHGV-1395137_12	411461.DORFOR_01144	209.0	0	Belongs to the ParB family	N/A
Pfam	UHGV-1395137_12	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
NCBIFam	UHGV-1395137_12	TIGR00180.1	N/A	N/A	ParB/RepB/Spo0J family partition protein	N/A
COG	UHGV-1395137_12	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-1395137_12	PF02195,PF18579,MF_02015,TIGR00180,COG1475	N/A	N/A	N/A	N/A
KOfam	UHGV-1395137_13	K01449	67.8	2.1e-19	cwlJ, sleB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
eggNOG-mapper	UHGV-1395137_13	536227.CcarbDRAFT_1301	57.4	0.000000596	cell wall hydrolase	N/A
Pfam	UHGV-1395137_13	PF07486	N/A	N/A	Cell Wall Hydrolase	Hydrolase_2
COG	UHGV-1395137_13	COG1388	N/A	N/A	LysM repeat	N/A
PHROG	UHGV-1395137_17	phrog_3777	44.0	0.0000000000025	N/A	unknown function
UniRef90	UHGV-1395137_17	UniRef90_A0A410PX07	107.0	3.99e-28	N/A	N/A
eggNOG-mapper	UHGV-1395137_17	665956.HMPREF1032_02664	55.8	0.000000116	N/A	N/A
Pfam	UHGV-1395137_17	PF12957	N/A	N/A	N/A	DUF3846
COG	UHGV-1395137_17	COG4734	N/A	N/A	Antirestriction protein ArdA	N/A
structural_annotation	UHGV-1395137_17	PF12957	N/A	N/A	N/A	N/A
UniRef90	UHGV-1395137_22	UniRef90_UPI0009C032EA	57.0	0.0000000297	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1395137_22	476272.RUMHYD_03349	63.5	0.00000000000416	N/A	N/A
structural_annotation	UHGV-1395137_23	PF05339,NF041951,COG1513	N/A	N/A	N/A	N/A
KOfam	UHGV-1395137_24	K22300	62.9	6.7e-18	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-1395137_24	phrog_8	53.1	0.0000000000000077	transcriptional regulator	transcription regulation
UniRef90	UHGV-1395137_24	UniRef90_A0A8J8SBE0	70.5	0.00000000000012	Helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-1395137_24	1163671.JAGI01000002_gene2856	66.6	0.00000000000213	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-1395137_24	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1395137_24	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1395137_24	PF01381,MF_00535,NF041951,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-1395137_25	K14059	141.5	1.19993e-41	int; integrase	N/A
PHROG	UHGV-1395137_25	phrog_1	151.7	5.60519e-45	integrase	integration and excision
UniRef90	UHGV-1395137_25	UniRef90_A0A7U9STR7	178.0	0	Putative prophage phiRv2 integrase	N/A
eggNOG-mapper	UHGV-1395137_25	1235799.C818_03513	163.0	1.82169e-44	Phage integrase, N-terminal SAM-like domain	N/A
Pfam	UHGV-1395137_25	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1395137_25	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1395137_25	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
PHROG	UHGV-1395137_26	phrog_9589	59.6	5.7e-17	endolysin	lysis
Pfam	UHGV-1395137_26	PF05257	N/A	N/A	CHAP domain	CHAP
Pfam	UHGV-1395137_26	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
COG	UHGV-1395137_26	COG0741	N/A	N/A	Soluble lytic murein transglycosylase or regulatory protein s ( may contain LysM/invasin domain)	N/A
structural_annotation	UHGV-1395137_26	PF01471,PF06940,TIGR02594,NF038080,COG3942	N/A	N/A	N/A	N/A
PHROG	UHGV-1395137_27	phrog_881	64.2	1.4e-18	holin	lysis
UniRef90	UHGV-1395137_27	UniRef90_A0A087DGL7	76.3	1.65e-16	Phage holin-like protein	N/A
eggNOG-mapper	UHGV-1395137_27	158787.BSCA_0719	76.3	2.76e-17	Putative phage holin Dp-1	N/A
Pfam	UHGV-1395137_27	PF16938	N/A	N/A	Putative phage holin Dp-1	Phage_holin_Dp1
structural_annotation	UHGV-1395137_27	PF16938	N/A	N/A	N/A	N/A
PHROG	UHGV-1395137_28	phrog_4105	47.6	0.00000000000012	N/A	unknown function
eggNOG-mapper	UHGV-1395137_28	428125.CLOLEP_01431	50.1	0.00000465	N/A	N/A
PHROG	UHGV-1395137_31	phrog_35892	102.4	0	N/A	unknown function
UniRef90	UHGV-1395137_31	UniRef90_A0A843HCR4	145.0	5.96e-35	Leucine-rich repeat protein	N/A
eggNOG-mapper	UHGV-1395137_31	471875.RUMLAC_02240	70.1	0.000000000587	dockerin type I repeat-containing domain protein	N/A
Pfam	UHGV-1395137_31	PF13306	N/A	N/A	BspA type Leucine rich repeat region (6 copies)	LRR_5
NCBIFam	UHGV-1395137_31	TIGR02167.1	N/A	N/A	bacterial surface protein 26-residue repeat	N/A
COG	UHGV-1395137_31	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1395137_31	PF13306,NF041351	N/A	N/A	N/A	N/A
PHROG	UHGV-1395137_32	phrog_13589	149.9	1.26117e-44	N/A	unknown function
eggNOG-mapper	UHGV-1395137_32	411460.RUMTOR_01324	182.0	0	N/A	N/A
PHROG	UHGV-1395137_33	phrog_31538	50.7	0.000000000000033	N/A	unknown function
eggNOG-mapper	UHGV-1395137_33	428125.CLOLEP_01433	57.4	0.00000000168	N/A	N/A
PHROG	UHGV-1395137_34	phrog_15594	105.7	2.1e-31	N/A	unknown function
eggNOG-mapper	UHGV-1395137_34	1118055.CAGU01000013_gene763	97.4	4.35e-25	N/A	N/A
structural_annotation	UHGV-1395137_34	PF16640,TIGR04488	N/A	N/A	N/A	N/A
PHROG	UHGV-1395137_35	phrog_1067	304.8	0	minor head protein	head and packaging
UniRef90	UHGV-1395137_35	UniRef90_A0A316NPB5	374.0	0	Peptidase S74 domain-containing protein	N/A
eggNOG-mapper	UHGV-1395137_35	1160721.RBI_I01574	304.0	0	Prophage endopeptidase tail	N/A
Pfam	UHGV-1395137_35	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-1395137_35	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-1395137_35	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-1395137_35	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-1395137_36	phrog_33	81.8	1.5e-23	distal tail protein Dit	tail
UniRef90	UHGV-1395137_36	UniRef90_A0A1C6H6D2	123.0	1.25e-30	Phage-related protein	N/A
eggNOG-mapper	UHGV-1395137_36	439292.Bsel_2995	93.2	5.65e-20	tail component	N/A
COG	UHGV-1395137_36	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-1395137_36	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
KOfam	UHGV-1395137_37	K20361	43.6	0.0000000000015	USO1; intracellular protein transport protein USO1	N/A
PHROG	UHGV-1395137_37	phrog_8462	156.6	0	tail length tape measure protein	tail
UniRef90	UHGV-1395137_37	UniRef90_R7FHV4	84.7	0.000000000000725	Phage tail tape measure protein family	N/A
eggNOG-mapper	UHGV-1395137_37	1121289.JHVL01000019_gene659	164.0	5.43e-39	tape measure	N/A
COG	UHGV-1395137_37	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
PHROG	UHGV-1395137_39	phrog_88	85.9	4.6e-25	major tail protein	tail
UniRef90	UHGV-1395137_39	UniRef90_A0A3E3ACS6	72.0	0.00000000000365	Phage tail protein	N/A
eggNOG-mapper	UHGV-1395137_39	33035.JPJF01000039_gene278	82.4	7.45e-17	N/A	N/A
NCBIFam	UHGV-1395137_39	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-1395137_39	PF06488,TIGR01603,COG3498	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1395137_40	33035.JPJF01000039_gene277	92.4	1.84e-21	N/A	N/A
eggNOG-mapper	UHGV-1395137_41	1232446.BAIE02000002_gene829	71.2	0.0000000000000172	N/A	N/A
structural_annotation	UHGV-1395137_41	PF05657	N/A	N/A	N/A	N/A
PHROG	UHGV-1395137_42	phrog_19734	74.1	2e-21	N/A	unknown function
UniRef90	UHGV-1395137_42	UniRef90_A0A0D8I708	67.8	0.00000000000227	Phage head-tail joining protein	N/A
eggNOG-mapper	UHGV-1395137_42	349161.Dred_2602	72.0	0.00000000000000822	N/A	N/A
structural_annotation	UHGV-1395137_42	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1395137_43	phrog_5223	76.4	2.5e-22	neck protein	connector
UniRef90	UHGV-1395137_43	UniRef90_A0A3B9G1D8	89.7	1.77e-21	DNA-packaging protein	N/A
eggNOG-mapper	UHGV-1395137_43	411471.SUBVAR_05853	85.1	2.46e-20	N/A	N/A
NCBIFam	UHGV-1395137_43	TIGR01560.2	N/A	N/A	head-tail connector protein	N/A
structural_annotation	UHGV-1395137_43	TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-1395137_45	phrog_10	124.1	1.4e-36	major head protein	head and packaging
UniRef90	UHGV-1395137_45	UniRef90_A0A3B8UB33	239.0	0	Phage major capsid protein	N/A
Pfam	UHGV-1395137_45	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-1395137_45	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-1395137_45	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-1395137_45	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-1395137_46	K06904	120.0	2.5e-35	N/A	N/A
PHROG	UHGV-1395137_46	phrog_80	143.6	1.80067e-42	head maturation protease	head and packaging
UniRef90	UHGV-1395137_46	UniRef90_A0A3B9G0S9	188.0	0	HK97 family phage prohead protease	N/A
eggNOG-mapper	UHGV-1395137_46	445975.COLSTE_02163	149.0	1.63952e-42	Caudovirus prohead serine protease	N/A
Pfam	UHGV-1395137_46	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
NCBIFam	UHGV-1395137_46	TIGR01543.1	N/A	N/A	HK97 family phage prohead protease	N/A
COG	UHGV-1395137_46	COG3740	N/A	N/A	Phage head maturation protease	N/A
structural_annotation	UHGV-1395137_46	PF04586,TIGR01543,COG3740	N/A	N/A	N/A	N/A
PHROG	UHGV-1395137_47	phrog_12	85.8	4.6e-26	portal protein	head and packaging
UniRef90	UHGV-1395137_47	UniRef90_D1PNC9	442.0	0	Putative phage portal protein, HK97 family	N/A
eggNOG-mapper	UHGV-1395137_47	411471.SUBVAR_05850	442.0	0	Phage portal protein	N/A
Pfam	UHGV-1395137_47	PF04860	N/A	N/A	Phage portal protein	Phage_portal
COG	UHGV-1395137_47	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-1395137_47	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-1395137_48	phrog_9	343.3	0	terminase large subunit	head and packaging
UniRef90	UHGV-1395137_48	UniRef90_A0A8J6TY49	765.0	0	Terminase large subunit	N/A
eggNOG-mapper	UHGV-1395137_48	887929.HMP0721_1268	723.0	0	Phage Terminase	N/A
Pfam	UHGV-1395137_48	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-1395137_48	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-1395137_48	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-1395137_48	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-1395137_49	phrog_13845	111.2	3.7e-33	N/A	unknown function
eggNOG-mapper	UHGV-1395137_49	1399942.U3PDR2_9CAUD	103.0	8.25e-26	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1395137	Yes	29,362	55	100	1