vOTU vOTU-082153

vOTU: vOTU-082153

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-082153
Number of genomes	1
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae
Taxonomy (UHGV)	vFAM-00005 → vSUBFAM-00094 → vGENUS-02937 → vSUBGEN-45440 → vOTU-082153
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-170 → CAG-170 sp000432135
Host range breadth	Species
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0097531
Biosample ID	N/A
Genome length (bp)	33,568 bps
CheckV completeness	91.53% (High-quality)
CDS count	59
CDS density	92.15%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-170 → CAG-170 sp000432135	Total connections	292	Host agreement	88.7
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae	Total connections	11	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 91.53)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-0097531_1	742767.HMPREF9456_02044	63.5	0.000000000205	N/A	N/A
eggNOG-mapper	UHGV-0097531_4	642492.Clole_0961	76.6	1.38e-17	N/A	N/A
structural_annotation	UHGV-0097531_4	PF12286	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0097531_5	PF10548	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0097531_7	NF041247	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0097531_8	PF05082	N/A	N/A	N/A	N/A
KOfam	UHGV-0097531_11	K00390	99.4	4.4e-29	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	N/A
PHROG	UHGV-0097531_11	phrog_424	122.3	3.9e-36	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0097531_11	UniRef90_UPI001D087498	429.0	0	phosphoadenosine phosphosulfate reductase family protein	N/A
eggNOG-mapper	UHGV-0097531_11	1408437.JNJN01000032_gene2312	333.0	0	Phosphoadenosine phosphosulfate reductase	N/A
PADLOC	UHGV-0097531_11	BrxP_00001	62.6	3.9e-18	BrxP	BREX
Pfam	UHGV-0097531_11	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-0097531_11	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-0097531_11	PF01507,MF_00063,NF010369,COG0175	N/A	N/A	N/A	N/A
Pfam	UHGV-0097531_12	PF04448	N/A	N/A	N/A	DUF551
structural_annotation	UHGV-0097531_12	NF041588	N/A	N/A	N/A	N/A
PHROG	UHGV-0097531_13	phrog_3136	125.4	2.7e-37	N/A	unknown function
UniRef90	UHGV-0097531_13	UniRef90_UPI001A9A8D4F	111.0	4.14e-28	ASCH domain-containing protein	N/A
eggNOG-mapper	UHGV-0097531_13	1117108.PAALTS15_17241	53.9	0.000000249	ASCH	N/A
Pfam	UHGV-0097531_13	PF04266	N/A	N/A	ASCH domain	ASCH
COG	UHGV-0097531_13	COG4933	N/A	N/A	Predicted transcriptional regulator, contains an HTH and PUA-like domains	N/A
structural_annotation	UHGV-0097531_13	PF04266,MF_00684,NF008917,COG4933	N/A	N/A	N/A	N/A
PHROG	UHGV-0097531_14	phrog_355	75.5	7.5e-22	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0097531_14	UniRef90_R5AT00	115.0	1.31e-31	Gp57	N/A
eggNOG-mapper	UHGV-0097531_14	573061.Clocel_3558	89.7	4.36e-22	N/A	N/A
Pfam	UHGV-0097531_14	PF14359	N/A	N/A	N/A	DUF4406
COG	UHGV-0097531_14	COG3613	N/A	N/A	Nucleoside 2-deoxyribosyltransferase	N/A
structural_annotation	UHGV-0097531_14	PF14359,MF_03036,COG3613	N/A	N/A	N/A	N/A
PHROG	UHGV-0097531_15	phrog_38832	60.1	4.1e-21	N/A	unknown function
eggNOG-mapper	UHGV-0097531_15	445972.ANACOL_00165	62.0	0.00000000248	N/A	N/A
PHROG	UHGV-0097531_18	phrog_190	100.6	1.7e-29	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0097531_18	UniRef90_UPI0006C2AC63	134.0	1.23e-37	N/A	N/A
eggNOG-mapper	UHGV-0097531_18	1226322.HMPREF1545_00295	117.0	2.02e-31	N/A	N/A
Pfam	UHGV-0097531_18	PF06356	N/A	N/A	N/A	DUF1064
structural_annotation	UHGV-0097531_18	PF06356	N/A	N/A	N/A	N/A
PHROG	UHGV-0097531_20	phrog_374	59.0	1.1e-16	HNH endonuclease	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0097531_20	1423807.BACO01000037_gene1103	68.9	0.00000000000084	N/A	N/A
PHROG	UHGV-0097531_26	phrog_3584	113.2	2.3e-33	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0097531_26	537013.CLOSTMETH_02141	74.7	0.000000000000131	N/A	N/A
structural_annotation	UHGV-0097531_26	PF21578,MF_00360	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0097531_27	1297617.JPJD01000059_gene2640	84.7	3.61e-19	N/A	N/A
structural_annotation	UHGV-0097531_27	PF06530,TIGR01636	N/A	N/A	N/A	N/A
PHROG	UHGV-0097531_28	phrog_119	47.1	0.00000000000032	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0097531_28	UniRef90_A0A174XSZ8	127.0	1.02e-35	Prophage LambdaBa04, GP54	N/A
eggNOG-mapper	UHGV-0097531_28	1235793.C809_01915	119.0	4.94e-33	HNH endonuclease	N/A
Pfam	UHGV-0097531_28	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-0097531_28	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
PHROG	UHGV-0097531_29	phrog_1066	128.1	3.6e-38	N/A	unknown function
eggNOG-mapper	UHGV-0097531_29	1341151.ASZU01000004_gene265	126.0	8.07e-36	N/A	N/A
structural_annotation	UHGV-0097531_29	PF05119,TIGR01558	N/A	N/A	N/A	N/A
PHROG	UHGV-0097531_30	phrog_9	374.6	0	terminase large subunit	head and packaging
UniRef90	UHGV-0097531_30	UniRef90_A0A1Y3W5R1	785.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0097531_30	1203606.HMPREF1526_00981	731.0	0	Terminase	N/A
Pfam	UHGV-0097531_30	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0097531_30	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0097531_30	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0097531_30	PF20441,PF03354,MF_04145,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0097531_31	phrog_12	178.0	0	portal protein	head and packaging
UniRef90	UHGV-0097531_31	UniRef90_R8W4B0	499.0	0	HK97 family phage portal protein	N/A
eggNOG-mapper	UHGV-0097531_31	1203606.HMPREF1526_00980	499.0	0	Portal protein	N/A
Pfam	UHGV-0097531_31	PF04860	N/A	N/A	Phage portal protein	Phage_portal
COG	UHGV-0097531_31	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0097531_31	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-0097531_32	K01358	133.0	3.5e-39	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-0097531_32	phrog_94	200.0	0	head maturation protease	head and packaging
UniRef90	UHGV-0097531_32	UniRef90_UPI0018979DC8	201.0	0	Clp protease ClpP	N/A
eggNOG-mapper	UHGV-0097531_32	1280689.AUJC01000011_gene1520	188.0	0	Belongs to the peptidase S14 family	N/A
Pfam	UHGV-0097531_32	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-0097531_32	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-0097531_32	PF00574,MF_00444,NF011090,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-0097531_33	phrog_10	181.8	0	major head protein	head and packaging
UniRef90	UHGV-0097531_33	UniRef90_UPI00189AE5FE	400.0	0	phage major capsid protein	N/A
eggNOG-mapper	UHGV-0097531_33	1280689.AUJC01000011_gene1521	388.0	0	Phage major capsid protein, HK97 family	N/A
Pfam	UHGV-0097531_33	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0097531_33	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0097531_33	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0097531_33	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0097531_34	phrog_5223	41.1	0.000000000024	neck protein	connector
UniRef90	UHGV-0097531_34	UniRef90_UPI000BEC4770	54.7	0.000000117	head-tail connector protein	N/A
PHROG	UHGV-0097531_35	phrog_1951	74.1	1.4e-21	head-tail adaptor	connector
UniRef90	UHGV-0097531_35	UniRef90_A0A1F8UNT5	63.5	0.0000000000494	Phage head-tail adapter protein	N/A
eggNOG-mapper	UHGV-0097531_35	1094508.Tsac_2422	53.1	0.000000113	Phage head-tail joining protein	N/A
Pfam	UHGV-0097531_35	PF05521	N/A	N/A	Phage head-tail joining protein	Phage_H_T_join
NCBIFam	UHGV-0097531_35	TIGR01563.1	N/A	N/A	phage head closure protein	N/A
COG	UHGV-0097531_35	COG5614	N/A	N/A	Phage head-tail adaptor	N/A
structural_annotation	UHGV-0097531_35	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0097531_36	1487921.DP68_11350	60.5	0.000000000198	N/A	N/A
structural_annotation	UHGV-0097531_36	PF05657	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0097531_37	TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-0097531_38	phrog_88	85.7	6e-25	major tail protein	tail
UniRef90	UHGV-0097531_38	UniRef90_S0FUN2	113.0	2.65e-28	Phage major tail protein, phi13 family	N/A
eggNOG-mapper	UHGV-0097531_38	1195236.CTER_5106	113.0	4.44e-29	phage major tail protein, phi13 family	N/A
NCBIFam	UHGV-0097531_38	TIGR01603.1	N/A	N/A	major tail protein	N/A
COG	UHGV-0097531_38	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0097531_38	PF04630,TIGR01603,COG3498	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0097531_39	PF11836	N/A	N/A	N/A	N/A
PHROG	UHGV-0097531_40	phrog_13338	109.3	3.7e-32	N/A	unknown function
UniRef90	UHGV-0097531_40	UniRef90_A0A2Z4I560	162.0	9.65e-39	Phage tail protein	N/A
eggNOG-mapper	UHGV-0097531_40	1195236.CTER_5104	181.0	0	nuclear chromosome segregation	N/A
Pfam	UHGV-0097531_40	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
COG	UHGV-0097531_40	COG5283	N/A	N/A	Phage-related tail protein	N/A
structural_annotation	UHGV-0097531_40	PF11570,PF10145,TIGR01760	N/A	N/A	N/A	N/A
PHROG	UHGV-0097531_41	phrog_37549	63.8	3.1e-19	virion structural protein	head and packaging
UniRef90	UHGV-0097531_41	UniRef90_A0A2H4JAI8	119.0	2.12e-24	Putative structural protein	N/A
eggNOG-mapper	UHGV-0097531_41	997296.PB1_16159	90.9	7.05e-16	self proteolysis	N/A
COG	UHGV-0097531_41	COG3209	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0097531_41	PF06995,PF19077,PF16794,PF00041,MF_04116,NF010681,COG3401,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0097531_42	phrog_26795	129.3	6.7e-40	N/A	unknown function
eggNOG-mapper	UHGV-0097531_42	1382315.JPOI01000001_gene271	229.0	0	N/A	N/A
structural_annotation	UHGV-0097531_42	PF14594,NF033848,COG4379	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0097531_43	PF01176,MF_00085,TIGR00523,COG0361	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0097531_45	PF01176,MF_00085,TIGR00523,COG0361	N/A	N/A	N/A	N/A
PHROG	UHGV-0097531_46	phrog_937	46.0	0.00000000000085	hemolysin	other
PHROG	UHGV-0097531_47	phrog_443	56.8	7.3e-16	holin	lysis
UniRef90	UHGV-0097531_47	UniRef90_A0A4R1QPE5	91.7	4.38e-23	Phage r1t holin	N/A
eggNOG-mapper	UHGV-0097531_47	1469948.JPNB01000002_gene3855	91.7	7.34e-24	Putative lactococcus lactis phage r1t holin	N/A
Pfam	UHGV-0097531_47	PF16945	N/A	N/A	Putative lactococcus lactis phage r1t holin	Phage_r1t_holin
structural_annotation	UHGV-0097531_47	PF16945	N/A	N/A	N/A	N/A
KOfam	UHGV-0097531_48	K01447	109.0	6.9e-32	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0097531_48	phrog_1794	105.4	7.6e-31	amidase	lysis
UniRef90	UHGV-0097531_48	UniRef90_N1ZHY5	132.0	2.16e-34	N-acetylmuramoyl-L-alanine amidase domain-containing protein	N/A
eggNOG-mapper	UHGV-0097531_48	97138.C820_00251	132.0	3.62e-35	Ami_2	N/A
Pfam	UHGV-0097531_48	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
COG	UHGV-0097531_48	COG3023	N/A	N/A	N-acetyl-anhydromuramyl-L-alanine amidase AmpD	N/A
structural_annotation	UHGV-0097531_48	PF01510,MF_04111,NF008758,COG5632	N/A	N/A	N/A	N/A
UniRef90	UHGV-0097531_53	UniRef90_A0A8F0WD75	82.8	9.5e-17	RNA polymerase sigma factor/Ubiquitin-like protein	N/A
eggNOG-mapper	UHGV-0097531_53	1378168.N510_03079	72.8	0.000000000000289	N/A	N/A
KOfam	UHGV-0097531_54	K06400	248.1	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-0097531_54	phrog_95	261.5	0	integrase	integration and excision
UniRef90	UHGV-0097531_54	UniRef90_G9YSD9	416.0	0	Resolvase protein	N/A
eggNOG-mapper	UHGV-0097531_54	1408437.JNJN01000002_gene1420	406.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-0097531_54	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-0097531_54	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-0097531_54	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-0097531_54	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0097531_54	PF07508,PF00239,NF041201,COG1961	N/A	N/A	N/A	N/A
Pfam	UHGV-0097531_55	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0097531_55	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0097531_55	PF12844,MF_00535,NF041677,COG1396	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0097531_56	1121924.ATWH01000011_gene257	73.9	0.0000000000118	TM2 domain	N/A
COG	UHGV-0097531_56	COG2314	N/A	N/A	N/A	N/A
KOfam	UHGV-0097531_57	K22300	55.8	0.0000000000000012	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0097531_57	phrog_8	55.8	8.2e-16	transcriptional regulator	transcription regulation
UniRef90	UHGV-0097531_57	UniRef90_A0A2U1BEG8	124.0	2.02e-34	Helix-turn-helix protein	N/A
eggNOG-mapper	UHGV-0097531_57	445972.ANACOL_03315	111.0	5.67e-30	N/A	N/A
PADLOC	UHGV-0097531_57	retron_type_VI_hth_cluster2_1	41.2	0.000000000034	N/A	Retron
Pfam	UHGV-0097531_57	PF12844	N/A	N/A	Helix-turn-helix domain	HTH_19
COG	UHGV-0097531_57	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0097531_57	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0097531	Yes	33,568	59	92	1