vOTU vOTU-082515

vOTU: vOTU-082515

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-082515
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00008 → vSUBFAM-00203 → vGENUS-00137 → vSUBGEN-26026 → vOTU-082515
Host lineage	Bacteria → Firmicutes_C → Negativicutes → Veillonellales → Dialisteraceae → Dialister → Dialister invisus
Host range breadth	Species
Lifestyle	lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0057467
Biosample ID	SAMEA2157853
Genome length (bp)	31,726 bps
CheckV completeness	95.28% (High-quality)
CDS count	44
CDS density	96.54%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_C → Negativicutes → Veillonellales → Dialisteraceae → Dialister → Dialister invisus	Total connections	489	Host agreement	100
PHIST-predicted host lineage	Bacteria → Firmicutes_C → Negativicutes → Veillonellales → Dialisteraceae → Dialister → Dialister invisus	Total connections	8	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 95.28)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-0057467_1	886377.Murru_3299	68.9	0.00000000000302	N/A	N/A
KOfam	UHGV-0057467_5	K01356	133.5	2.5e-39	lexA; repressor LexA [EC:3.4.21.88]	N/A
PHROG	UHGV-0057467_5	phrog_4	114.2	1.4e-33	transcriptional repressor	transcription regulation
UniRef90	UHGV-0057467_5	UniRef90_U7UJL7	259.0	0	Peptidase S24-like protein	N/A
eggNOG-mapper	UHGV-0057467_5	1111454.HMPREF1250_0782	259.0	0	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0057467_5	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
Pfam	UHGV-0057467_5	PF00717	N/A	N/A	Peptidase S24-like	Peptidase_S24
COG	UHGV-0057467_5	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
structural_annotation	UHGV-0057467_5	PF00717,PF12844,MF_00015,TIGR00498,COG1974	N/A	N/A	N/A	N/A
UniRef90	UHGV-0057467_7	UniRef90_UPI000C9ADD73	68.6	0.000000000000343	N/A	N/A
eggNOG-mapper	UHGV-0057467_7	663278.Ethha_0449	74.3	3.07e-16	N/A	N/A
Pfam	UHGV-0057467_7	PF13031	N/A	N/A	N/A	DUF3892
PHROG	UHGV-0057467_8	phrog_7735	53.0	0.0000000000000065	excisionase	integration and excision
eggNOG-mapper	UHGV-0057467_8	1443125.Z962_05785	49.7	0.00000225	N/A	N/A
Pfam	UHGV-0057467_8	PF12728	N/A	N/A	Helix-turn-helix domain	HTH_17
structural_annotation	UHGV-0057467_8	PF12728,MF_01155,NF033787,COG3311	N/A	N/A	N/A	N/A
PHROG	UHGV-0057467_9	phrog_14367	49.3	0.000000000000033	N/A	unknown function
UniRef90	UHGV-0057467_9	UniRef90_E4L8C9	91.3	4.27e-22	LysM domain-containing protein	N/A
eggNOG-mapper	UHGV-0057467_9	1123288.SOV_5c02190	48.9	0.00000342	Lysin motif	N/A
COG	UHGV-0057467_9	COG1388	N/A	N/A	LysM repeat	N/A
structural_annotation	UHGV-0057467_9	PF01476,MF_02014,NF010723,COG1388	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0057467_12	PF09953,MF_00369,NF037951	N/A	N/A	N/A	N/A
PHROG	UHGV-0057467_13	phrog_674	73.3	2.6e-21	N/A	unknown function
UniRef90	UHGV-0057467_13	UniRef90_UPI0019577DA3	146.0	6.63e-38	N/A	N/A
eggNOG-mapper	UHGV-0057467_13	1391647.AVSV01000003_gene1789	84.7	6.51e-16	N/A	N/A
Pfam	UHGV-0057467_13	PF07083	N/A	N/A	N/A	DUF1351
structural_annotation	UHGV-0057467_13	PF07083	N/A	N/A	N/A	N/A
PHROG	UHGV-0057467_14	phrog_1366	308.9	0	N/A	unknown function
UniRef90	UHGV-0057467_14	UniRef90_R5T4I4	553.0	0	AAA domain-containing protein	N/A
eggNOG-mapper	UHGV-0057467_14	1123288.SOV_1c03840	310.0	0	AAA domain	N/A
Pfam	UHGV-0057467_14	PF13479	N/A	N/A	AAA domain	AAA_24
COG	UHGV-0057467_14	COG0468	N/A	N/A	RecA/RadA recombinase	N/A
structural_annotation	UHGV-0057467_14	PF13479,MF_00350,TIGR01618,COG0468	N/A	N/A	N/A	N/A
KOfam	UHGV-0057467_15	K03111	69.8	6.7e-20	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0057467_15	phrog_44	84.5	1.9e-24	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0057467_15	UniRef90_R5T9W3	196.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0057467_15	657322.FPR_24250	74.3	0.0000000000000159	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-0057467_15	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0057467_15	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0057467_15	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0057467_15	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0057467_16	phrog_355	53.7	0.0000000000000029	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0057467_16	UniRef90_UPI001F4960A3	62.8	0.000000000395	N/A	N/A
eggNOG-mapper	UHGV-0057467_16	936573.HMPREF1147_1315	62.0	0.000000000123	N/A	N/A
Pfam	UHGV-0057467_16	PF14359	N/A	N/A	N/A	DUF4406
structural_annotation	UHGV-0057467_16	PF14359,MF_03036,TIGR03646,COG3613	N/A	N/A	N/A	N/A
PHROG	UHGV-0057467_17	phrog_2562	193.7	0	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0057467_17	UniRef90_A0A379CFM4	127.0	3.11e-31	N/A	N/A
eggNOG-mapper	UHGV-0057467_17	706434.HMPREF9429_00772	160.0	2.8026e-45	N/A	N/A
Pfam	UHGV-0057467_17	PF14297	N/A	N/A	Lin1244/Lin1753-like, N-terminal	Lin1244_N
COG	UHGV-0057467_17	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0057467_17	PF14297,TIGR01714	N/A	N/A	N/A	N/A
KOfam	UHGV-0057467_18	K02315	153.4	1.4013e-45	dnaC; DNA replication protein DnaC	N/A
PHROG	UHGV-0057467_18	phrog_50	147.7	8.54792e-44	DnaC-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0057467_18	UniRef90_R6BBB2	148.0	1.15e-40	DNA replication protein DnaC	N/A
eggNOG-mapper	UHGV-0057467_18	1280706.AUJE01000003_gene2277	140.0	2.13e-38	DNA-dependent DNA replication	N/A
Pfam	UHGV-0057467_18	PF01695	N/A	N/A	IstB-like ATP binding protein	IstB_IS21
COG	UHGV-0057467_18	COG1484	N/A	N/A	DNA replication protein DnaC	N/A
structural_annotation	UHGV-0057467_18	PF01695,MF_01919,NF005992,COG1484	N/A	N/A	N/A	N/A
KOfam	UHGV-0057467_22	K01160	47.6	0.00000000000049	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-0057467_22	phrog_1682	66.4	5e-19	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0057467_22	UniRef90_A0A134CHV4	140.0	1.13e-39	Crossover junction endodeoxyribonuclease RusA	N/A
eggNOG-mapper	UHGV-0057467_22	910314.HMPREF9220_1104	132.0	1.39e-38	Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC	N/A
COG	UHGV-0057467_22	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-0057467_22	PF19595,NF007305,COG4570	N/A	N/A	N/A	N/A
PHROG	UHGV-0057467_25	phrog_36	57.9	1.9e-16	transcriptional regulator	transcription regulation
eggNOG-mapper	UHGV-0057467_25	706434.HMPREF9429_00383	52.4	0.00000308	N/A	N/A
structural_annotation	UHGV-0057467_25	PF07374,TIGR01636	N/A	N/A	N/A	N/A
PHROG	UHGV-0057467_26	phrog_309	183.8	0	terminase small subunit	head and packaging
UniRef90	UHGV-0057467_26	UniRef90_A0A414NWE7	175.0	0	Helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0057467_26	272558.10176158	170.0	0	Homeodomain-like domain	N/A
Pfam	UHGV-0057467_26	PF13022	N/A	N/A	Helix-turn-helix of insertion element transposase	HTH_Tnp_1_2
COG	UHGV-0057467_26	COG2963	N/A	N/A	Transposase InsE and inactivated derivatives	N/A
structural_annotation	UHGV-0057467_26	PF07141	N/A	N/A	N/A	N/A
KOfam	UHGV-0057467_27	K06909	123.4	2.4e-36	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0057467_27	phrog_2	107.8	1.6e-31	terminase large subunit	head and packaging
UniRef90	UHGV-0057467_27	UniRef90_UPI001D073785	709.0	0	phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0057467_27	401526.TcarDRAFT_1283	334.0	0	Phage terminase large subunit (GpA)	N/A
Pfam	UHGV-0057467_27	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
COG	UHGV-0057467_27	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0057467_27	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0057467_29	phrog_156	358.7	0	portal protein	head and packaging
UniRef90	UHGV-0057467_29	UniRef90_F7NK66	397.0	0	Putative phage portal protein	N/A
eggNOG-mapper	UHGV-0057467_29	401526.TcarDRAFT_1284	408.0	0	Tfp pilus assembly protein FimV	N/A
Pfam	UHGV-0057467_29	PF16510	N/A	N/A	Phage P22-like portal protein	P22_portal
COG	UHGV-0057467_29	COG3170	N/A	N/A	Type IV pilus assembly protein FimV	N/A
structural_annotation	UHGV-0057467_29	PF16510,MF_04120,TIGR01538,COG4383	N/A	N/A	N/A	N/A
PHROG	UHGV-0057467_31	phrog_334	201.1	0	major head protein	head and packaging
UniRef90	UHGV-0057467_31	UniRef90_UPI000E723A53	459.0	0	N4-gp56 family major capsid protein	N/A
eggNOG-mapper	UHGV-0057467_31	401526.TcarDRAFT_1286	252.0	0	N/A	N/A
Pfam	UHGV-0057467_31	PF13252	N/A	N/A	N/A	DUF4043
NCBIFam	UHGV-0057467_31	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-0057467_31	PF13252,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0057467_32	PF20387	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0057467_33	1123288.SOV_4c02700	53.1	0.00000131	N/A	N/A
structural_annotation	UHGV-0057467_33	PF20387	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0057467_34	1485543.JMME01000005_gene872	338.0	0	N/A	N/A
structural_annotation	UHGV-0057467_34	PF11134,MF_03008,NF010237,TIGR04362,COG4257	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0057467_35	1408428.JNJP01000025_gene297	54.7	0.00000648	tail fiber protein	N/A
COG	UHGV-0057467_35	COG5301	N/A	N/A	Phage-related tail fiber protein	N/A
structural_annotation	UHGV-0057467_35	PF20747	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0057467_37	PF11039,MF_00084,NF000482,COG3818	N/A	N/A	N/A	N/A
UniRef90	UHGV-0057467_38	UniRef90_UPI001D07B8A4	333.0	0	Hint domain-containing protein	N/A
eggNOG-mapper	UHGV-0057467_38	1123288.SOV_4c02760	142.0	8.64e-35	N/A	N/A
Pfam	UHGV-0057467_38	PF13403	N/A	N/A	Hint domain	Hint_2
structural_annotation	UHGV-0057467_38	PF07591,NF038136,TIGR03017,COG4942	N/A	N/A	N/A	N/A
PHROG	UHGV-0057467_40	phrog_9854	498.5	0	N/A	unknown function
UniRef90	UHGV-0057467_40	UniRef90_UPI001389E669	1360.0	0	phage tail tip lysozyme	N/A
eggNOG-mapper	UHGV-0057467_40	401526.TcarDRAFT_1293	911.0	0	protein secretion by the type IV secretion system	N/A
Pfam	UHGV-0057467_40	PF18013	N/A	N/A	Phage tail lysozyme	Phage_lysozyme2
Pfam	UHGV-0057467_40	PF18857	N/A	N/A	Large polyvalent protein associated domain 38	LPD38
COG	UHGV-0057467_40	COG0503	N/A	N/A	Adenine/guanine phosphoribosyltransferase or related PRPP-binding protein	N/A
structural_annotation	UHGV-0057467_40	PF18857,PF18013	N/A	N/A	N/A	N/A
PHROG	UHGV-0057467_41	phrog_4105	64.2	1.9e-18	N/A	unknown function
eggNOG-mapper	UHGV-0057467_41	1273103.NM10_01731	68.2	0.000000000000254	N/A	N/A
KOfam	UHGV-0057467_43	K07273	161.2	0	acm; lysozyme	N/A
PHROG	UHGV-0057467_43	phrog_6745	129.6	2.5e-38	endolysin	lysis
UniRef90	UHGV-0057467_43	UniRef90_UPI001D0872FD	309.0	0	glycosyl hydrolase family 25	N/A
eggNOG-mapper	UHGV-0057467_43	910314.HMPREF9220_0603	283.0	0	Glycosyl hydrolases family 25	N/A
Pfam	UHGV-0057467_43	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-0057467_43	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-0057467_43	PF01183,NF008377,COG3757	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0057467	Yes	31,726	44	95	1