vOTU vOTU-082983

vOTU: vOTU-082983

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-082983
Number of genomes	1
Taxonomy (ICTV)
Taxonomy (UHGV)	vFAM-00005 → vSUBFAM-06206 → vGENUS-15186 → vSUBGEN-26242 → vOTU-082983
Host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae
Host range breadth	Family
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0092900
Biosample ID	SAMEA3449216
Genome length (bp)	39,041 bps
CheckV completeness	93.96% (High-quality)
CDS count	51
CDS density	94.48%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae	Total connections	25	Host agreement	96
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 93.96)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0092900_1	K01447	101.5	1.2e-29	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0092900_1	phrog_670	114.5	1.1e-33	endolysin	lysis
UniRef90	UHGV-0092900_1	UniRef90_A0A844E740	412.0	0	N-acetylmuramoyl-L-alanine amidase domain-containing protein	N/A
eggNOG-mapper	UHGV-0092900_1	1235802.C823_05611	201.0	0	Ami_2	N/A
Pfam	UHGV-0092900_1	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
Pfam	UHGV-0092900_1	PF21540	N/A	N/A	Choline-binding repeat	Choline_bind_4
COG	UHGV-0092900_1	COG5632	N/A	N/A	N-acetylmuramoyl-L-alanine amidase CwlA	N/A
structural_annotation	UHGV-0092900_1	PF01510,MF_04111,NF008758,COG5632	N/A	N/A	N/A	N/A
PHROG	UHGV-0092900_2	phrog_1129	90.4	1.1e-26	holin	lysis
UniRef90	UHGV-0092900_2	UniRef90_U2Q4W5	182.0	0	Holin family protein	N/A
eggNOG-mapper	UHGV-0092900_2	1256908.HMPREF0373_00463	182.0	0	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-0092900_2	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0092900_2	PF06946	N/A	N/A	N/A	N/A
PHROG	UHGV-0092900_3	phrog_4105	91.1	8.1e-27	N/A	unknown function
eggNOG-mapper	UHGV-0092900_3	1256908.HMPREF0373_00464	167.0	0	N/A	N/A
eggNOG-mapper	UHGV-0092900_5	476272.RUMHYD_00002	121.0	2.18e-28	N/A	N/A
eggNOG-mapper	UHGV-0092900_6	742733.HMPREF9469_00973	65.1	0.0000000131	N/A	N/A
eggNOG-mapper	UHGV-0092900_8	1304866.K413DRAFT_3052	59.3	0.000000723	Collagen triple helix repeat (20 copies)	N/A
COG	UHGV-0092900_8	COG3266	N/A	N/A	Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain	N/A
UniRef90	UHGV-0092900_9	UniRef90_A0A396QFJ6	78.2	0.000000000000119	N/A	N/A
PHROG	UHGV-0092900_10	phrog_22978	654.3	0	N/A	unknown function
eggNOG-mapper	UHGV-0092900_10	1410650.JHWL01000003_gene2814	629.0	0	N/A	N/A
Pfam	UHGV-0092900_10	PF18838	N/A	N/A	Large polyvalent protein associated domain 23	LPD23
UniRef90	UHGV-0092900_11	UniRef90_R5DCX9	101.0	1.09e-20	PG_binding_1 domain-containing protein	N/A
eggNOG-mapper	UHGV-0092900_11	1410650.JHWL01000003_gene2815	173.0	0	N/A	N/A
PHROG	UHGV-0092900_13	phrog_511	215.3	0	internal virion protein	head and packaging
eggNOG-mapper	UHGV-0092900_13	1410650.JHWL01000003_gene2827	407.0	0	N/A	N/A
structural_annotation	UHGV-0092900_13	PF11134,NF038015,TIGR03721,COG3823	N/A	N/A	N/A	N/A
PHROG	UHGV-0092900_14	phrog_12105	105.7	3.4e-31	N/A	unknown function
eggNOG-mapper	UHGV-0092900_14	1226322.HMPREF1545_03850	57.0	0.0000000115	N/A	N/A
PHROG	UHGV-0092900_15	phrog_15239	42.0	0.000000000015	N/A	unknown function
PHROG	UHGV-0092900_16	phrog_1357	248.4	0	major head protein	head and packaging
UniRef90	UHGV-0092900_16	UniRef90_UPI00047AA53B	484.0	0	N4-gp56 family major capsid protein	N/A
eggNOG-mapper	UHGV-0092900_16	1410650.JHWL01000003_gene2830	484.0	0	N/A	N/A
Pfam	UHGV-0092900_16	PF13252	N/A	N/A	N/A	DUF4043
NCBIFam	UHGV-0092900_16	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-0092900_16	PF13252,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0092900_17	phrog_13908	238.9	0	N/A	unknown function
eggNOG-mapper	UHGV-0092900_17	1410650.JHWL01000003_gene2831	129.0	1.15e-32	N/A	N/A
KOfam	UHGV-0092900_18	K07584	57.2	3.6e-16	N/A	N/A
PHROG	UHGV-0092900_18	phrog_4478	50.1	0.000000000000035	peptidase	other
UniRef90	UHGV-0092900_18	UniRef90_A0A396QPR2	50.1	0.00000954	Ribosomal-processing cysteine protease Prp	N/A
eggNOG-mapper	UHGV-0092900_18	476272.RUMHYD_02852	50.1	0.00000175	Cysteine protease Prp	N/A
Pfam	UHGV-0092900_18	PF04327	N/A	N/A	Cysteine protease Prp	Peptidase_Prp
COG	UHGV-0092900_18	COG2868	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0092900_18	PF04327,NF011133,COG2868	N/A	N/A	N/A	N/A
PHROG	UHGV-0092900_19	phrog_156	322.2	0	portal protein	head and packaging
eggNOG-mapper	UHGV-0092900_19	1410650.JHWL01000003_gene2833	666.0	0	N/A	N/A
structural_annotation	UHGV-0092900_19	PF16510,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0092900_20	K06909	138.2	8.99998e-41	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0092900_20	phrog_979	129.9	2.29999e-40	terminase large subunit	head and packaging
UniRef90	UHGV-0092900_20	UniRef90_UPI0006875436	652.0	0	phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0092900_20	1410650.JHWL01000003_gene2834	652.0	0	N/A	N/A
Pfam	UHGV-0092900_20	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-0092900_20	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0092900_20	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
KOfam	UHGV-0092900_21	K07474	52.4	8e-21	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-0092900_21	phrog_51	74.2	1.2e-29	terminase small subunit	head and packaging
UniRef90	UHGV-0092900_21	UniRef90_UPI001C111A52	98.6	8e-22	terminase small subunit	N/A
eggNOG-mapper	UHGV-0092900_21	1158602.I590_02986	61.6	0.00000000325	DNA packaging	N/A
Pfam	UHGV-0092900_21	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-0092900_21	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
PHROG	UHGV-0092900_23	phrog_20593	55.6	2e-16	N/A	unknown function
UniRef90	UHGV-0092900_24	UniRef90_R5TJQ4	66.2	0.00000000000115	Carbamoyl-phosphate synthase L chain ATP-binding protein	N/A
structural_annotation	UHGV-0092900_26	PF21715,COG4901	N/A	N/A	N/A	N/A
UniRef90	UHGV-0092900_28	UniRef90_A0A416JWI8	89.7	2.87e-22	N/A	N/A
eggNOG-mapper	UHGV-0092900_28	1256908.HMPREF0373_00667	109.0	2.26e-30	N/A	N/A
KOfam	UHGV-0092900_29	K03111	57.8	1.3e-16	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0092900_29	phrog_26861	136.9	7.00005e-41	N/A	unknown function
UniRef90	UHGV-0092900_29	UniRef90_A0A3A9H148	195.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0092900_29	1235790.C805_03806	192.0	0	N/A	N/A
Pfam	UHGV-0092900_29	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0092900_29	NF004476.0	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0092900_29	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0092900_29	PF00436,PF13567,MF_00984,NF004476,COG0629	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0092900_30	PF12286,MF_00839,NF007780	N/A	N/A	N/A	N/A
KOfam	UHGV-0092900_32	K03497	121.9	9.6e-36	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	N/A
PHROG	UHGV-0092900_32	phrog_6218	192.3	0	ParB-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0092900_32	UniRef90_UPI001C0206B8	492.0	0	ParB/RepB/Spo0J family partition protein	N/A
eggNOG-mapper	UHGV-0092900_32	411461.DORFOR_01144	250.0	0	Belongs to the ParB family	N/A
Pfam	UHGV-0092900_32	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
NCBIFam	UHGV-0092900_32	TIGR00180.1	N/A	N/A	ParB/RepB/Spo0J family partition protein	N/A
COG	UHGV-0092900_32	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
PHROG	UHGV-0092900_34	phrog_7566	102.7	2e-30	N/A	unknown function
eggNOG-mapper	UHGV-0092900_34	1235800.C819_00511	127.0	7.28e-36	N/A	N/A
KOfam	UHGV-0092900_35	K03111	131.9	7.5e-39	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0092900_35	phrog_44	136.0	2.6e-40	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0092900_35	UniRef90_A0A173UNZ4	229.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0092900_35	1256908.HMPREF0373_03133	200.0	0	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-0092900_35	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0092900_35	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0092900_35	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0092900_35	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0092900_35	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A
KOfam	UHGV-0092900_36	K03469	60.6	3.4e-17	rnhA, RNASEH1; ribonuclease HI [EC:3.1.26.4]	N/A
PHROG	UHGV-0092900_36	phrog_531	56.5	2.8e-16	Rnase H	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0092900_36	UniRef90_A0A173UM21	235.0	0	Ribonuclease H	N/A
eggNOG-mapper	UHGV-0092900_36	1235790.C805_03782	87.8	6.76e-20	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids	N/A
Pfam	UHGV-0092900_36	PF00075	N/A	N/A	RNase H	RNase_H
COG	UHGV-0092900_36	COG0328	N/A	N/A	Ribonuclease HI	N/A
structural_annotation	UHGV-0092900_36	PF00075,MF_00042,NF001236,COG0328	N/A	N/A	N/A	N/A
PHROG	UHGV-0092900_37	phrog_3584	155.2	0	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0092900_37	1235800.C819_02258	241.0	0	N/A	N/A
structural_annotation	UHGV-0092900_37	PF21578,NF041486	N/A	N/A	N/A	N/A
PHROG	UHGV-0092900_39	phrog_17873	77.3	1.2e-22	N/A	unknown function
structural_annotation	UHGV-0092900_40	PF16311,NF002796	N/A	N/A	N/A	N/A
PHROG	UHGV-0092900_44	phrog_355	56.5	5.3e-16	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0092900_44	UniRef90_A0A415G5B2	164.0	0	N/A	N/A
eggNOG-mapper	UHGV-0092900_44	397290.C810_05229	159.0	0	N/A	N/A
Pfam	UHGV-0092900_44	PF14359	N/A	N/A	N/A	DUF4406
structural_annotation	UHGV-0092900_44	PF14359	N/A	N/A	N/A	N/A
PHROG	UHGV-0092900_45	phrog_1048	178.5	0	N/A	unknown function
UniRef90	UHGV-0092900_45	UniRef90_A0A395V4Z5	292.0	0	N/A	N/A
eggNOG-mapper	UHGV-0092900_45	457412.RSAG_01107	271.0	0	N/A	N/A
Pfam	UHGV-0092900_45	PF11195	N/A	N/A	N/A	DUF2829
dbAPIS	UHGV-0092900_45	APIS029	N/A	N/A	Tad2 is a "sponge" that sequesters the immune signaling molecules produced by Thoeris TIR-domain proteins in response to phage.	N/A
structural_annotation	UHGV-0092900_45	PF11195	N/A	N/A	N/A	N/A
KOfam	UHGV-0092900_47	K18830	64.1	2.9e-18	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-0092900_47	phrog_8	56.2	7.5e-16	transcriptional regulator	transcription regulation
UniRef90	UHGV-0092900_47	UniRef90_UPI001D120794	174.0	0	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0092900_47	411470.RUMGNA_00191	167.0	0	DNA-binding helix-turn-helix protein	N/A
Pfam	UHGV-0092900_47	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0092900_47	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0092900_47	PF01381,MF_00535,NF007257,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0092900_48	K23779	50.0	0.000000000000065	sutR; XRE family transcriptional regulator, regulator of sulfur utilization	N/A
PHROG	UHGV-0092900_48	phrog_2967	45.7	0.0000000000012	transcriptional regulator	transcription regulation
UniRef90	UHGV-0092900_48	UniRef90_A0A3R6TWB5	95.9	9.08e-25	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0092900_48	411470.RUMGNA_00189	93.6	1.25e-24	Cro/C1-type HTH DNA-binding domain	N/A
PADLOC	UHGV-0092900_48	retron_type_VI_hth_cluster2_1	44.0	0.0000000000059	N/A	Retron
Pfam	UHGV-0092900_48	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0092900_48	PF01381,NF041951,COG1396	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0092900_49	1504822.CCNO01000008_gene2080	67.0	0.00000000312	Metallo-beta-lactamase superfamily	N/A
COG	UHGV-0092900_49	COG2333	N/A	N/A	DNA uptake channel protein ComEC C-terminal domain, metallo-beta-lactamase superfamily	N/A
KOfam	UHGV-0092900_50	K06400	328.8	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-0092900_50	phrog_95	372.1	0	integrase	integration and excision
UniRef90	UHGV-0092900_50	UniRef90_A0A374JP43	910.0	0	Recombinase family protein	N/A
eggNOG-mapper	UHGV-0092900_50	411468.CLOSCI_00582	743.0	0	Recombinase	N/A
Pfam	UHGV-0092900_50	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-0092900_50	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-0092900_50	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-0092900_50	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0092900_50	PF07508,PF00239,NF041201,COG1961	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0092900_51	1256908.HMPREF0373_01541	123.0	1.13e-32	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine	N/A
COG	UHGV-0092900_51	COG0621	N/A	N/A	tRNA A37 methylthiotransferase MiaB	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0092900	Yes	39,041	44	94	1