vOTU vOTU-083098

vOTU: vOTU-083098

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-083098
Number of genomes	2
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-170
Taxonomy (UHGV)	vFAM-00005 → vSUBFAM-00094 → vGENUS-00214 → vSUBGEN-25865 → vOTU-083098
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-170 → CAG-170 sp000432135
Host range breadth	Species
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0111275
Biosample ID	SAMEA3708791
Genome length (bp)	36,606 bps
CheckV completeness	99.60% (High-quality)
CDS count	67
CDS density	95.16%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-170 → CAG-170 sp000432135	Total connections	568	Host agreement	94.01
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-170	Total connections	10	Host agreement	80

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 99.6)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0111275_1	phrog_35892	123.3	1e-36	N/A	unknown function
UniRef90	UHGV-0111275_1	UniRef90_A0A843FMD8	176.0	0	Leucine-rich repeat domain-containing protein	N/A
eggNOG-mapper	UHGV-0111275_1	471875.RUMLAC_02240	154.0	1.08e-39	dockerin type I repeat-containing domain protein	N/A
Pfam	UHGV-0111275_1	PF13306	N/A	N/A	BspA type Leucine rich repeat region (6 copies)	LRR_5
NCBIFam	UHGV-0111275_1	TIGR02167.1	N/A	N/A	bacterial surface protein 26-residue repeat	N/A
COG	UHGV-0111275_1	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0111275_1	PF13306,NF041351	N/A	N/A	N/A	N/A
PHROG	UHGV-0111275_3	phrog_10898	40.2	0.000000000056	N/A	unknown function
structural_annotation	UHGV-0111275_3	PF16408,NF033510	N/A	N/A	N/A	N/A
PHROG	UHGV-0111275_4	phrog_10898	278.8	0	N/A	unknown function
UniRef90	UHGV-0111275_4	UniRef90_A0A7U3NJT3	186.0	0	Putative Ig-like domain-containing protein	N/A
eggNOG-mapper	UHGV-0111275_4	717606.PaecuDRAFT_2136	75.1	0.000000000000891	S-layer homology domain	N/A
COG	UHGV-0111275_4	COG1520	N/A	N/A	Outer membrane protein assembly factor BamB, contains PQQ-like beta-propeller repeat	N/A
structural_annotation	UHGV-0111275_4	PF19081,PF15418,MF_01905,NF032891,COG3291	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0111275_6	PF10651	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0111275_7	PF18614,MF_00085,NF003076	N/A	N/A	N/A	N/A
PHROG	UHGV-0111275_8	phrog_26795	128.1	5.4e-38	N/A	unknown function
UniRef90	UHGV-0111275_8	UniRef90_A0A5J6T4K8	134.0	2.17e-32	Minor tail protein	N/A
eggNOG-mapper	UHGV-0111275_8	1195236.CTER_5102	135.0	6.68e-34	N/A	N/A
structural_annotation	UHGV-0111275_8	PF14594,NF033848,COG4379	N/A	N/A	N/A	N/A
PHROG	UHGV-0111275_9	phrog_37549	79.9	4.5e-27	virion structural protein	head and packaging
UniRef90	UHGV-0111275_9	UniRef90_A0A3D0W045	221.0	0	Fibronectin type-III domain-containing protein	N/A
eggNOG-mapper	UHGV-0111275_9	1195236.CTER_5103	129.0	1.33e-28	N/A	N/A
structural_annotation	UHGV-0111275_9	PF02010,PF06848,PF19266,MF_04116,NF033679,NF032891,TIGR01633,TIGR04488,COG3401,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0111275_10	phrog_8462	129.0	5.7e-38	tail length tape measure protein	tail
UniRef90	UHGV-0111275_10	UniRef90_A0A2Z4I560	197.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-0111275_10	1195236.CTER_5104	181.0	0	nuclear chromosome segregation	N/A
COG	UHGV-0111275_10	COG5283	N/A	N/A	Phage-related tail protein	N/A
structural_annotation	UHGV-0111275_10	TIGR01760,NF033928	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0111275_11	PF11836	N/A	N/A	N/A	N/A
PHROG	UHGV-0111275_12	phrog_88	85.5	7.1e-25	major tail protein	tail
UniRef90	UHGV-0111275_12	UniRef90_S0FUN2	115.0	6.67e-29	Phage major tail protein, phi13 family	N/A
eggNOG-mapper	UHGV-0111275_12	1195236.CTER_5106	115.0	1.12e-29	phage major tail protein, phi13 family	N/A
NCBIFam	UHGV-0111275_12	TIGR01603.1	N/A	N/A	major tail protein	N/A
COG	UHGV-0111275_12	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0111275_12	PF04630,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-0111275_13	phrog_5	40.9	0.000000000044	tail completion or Neck1 protein	connector
structural_annotation	UHGV-0111275_13	TIGR01725	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0111275_14	1487921.DP68_11350	60.5	0.000000000198	N/A	N/A
structural_annotation	UHGV-0111275_14	PF05657	N/A	N/A	N/A	N/A
PHROG	UHGV-0111275_15	phrog_1951	74.5	1e-21	head-tail adaptor	connector
UniRef90	UHGV-0111275_15	UniRef90_UPI001B02B074	63.5	0.0000000000519	phage head closure protein	N/A
eggNOG-mapper	UHGV-0111275_15	1094508.Tsac_2422	54.7	0.0000000285	Phage head-tail joining protein	N/A
Pfam	UHGV-0111275_15	PF05521	N/A	N/A	Phage head-tail joining protein	Phage_H_T_join
NCBIFam	UHGV-0111275_15	TIGR01563.1	N/A	N/A	phage head closure protein	N/A
COG	UHGV-0111275_15	COG5614	N/A	N/A	Phage head-tail adaptor	N/A
structural_annotation	UHGV-0111275_15	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0111275_16	phrog_5223	45.8	0.00000000000084	neck protein	connector
UniRef90	UHGV-0111275_16	UniRef90_B6W9Y5	61.6	0.000000000257	Putative phage DNA packaging protein	N/A
eggNOG-mapper	UHGV-0111275_16	561177.ANHYDRO_01411	61.6	0.0000000000431	N/A	N/A
PHROG	UHGV-0111275_17	phrog_10	180.3	0	major head protein	head and packaging
UniRef90	UHGV-0111275_17	UniRef90_UPI00189AE5FE	406.0	0	phage major capsid protein	N/A
eggNOG-mapper	UHGV-0111275_17	1280689.AUJC01000011_gene1521	382.0	0	Phage major capsid protein, HK97 family	N/A
Pfam	UHGV-0111275_17	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0111275_17	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0111275_17	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0111275_17	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-0111275_18	K01358	130.9	1.5e-38	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-0111275_18	phrog_94	203.0	0	head maturation protease	head and packaging
UniRef90	UHGV-0111275_18	UniRef90_UPI0018979DC8	202.0	0	Clp protease ClpP	N/A
eggNOG-mapper	UHGV-0111275_18	1280689.AUJC01000011_gene1520	193.0	0	Belongs to the peptidase S14 family	N/A
Pfam	UHGV-0111275_18	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-0111275_18	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-0111275_18	PF00574,MF_00444,NF011090,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-0111275_19	phrog_12	176.8	0	portal protein	head and packaging
UniRef90	UHGV-0111275_19	UniRef90_UPI001898FCCE	499.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-0111275_19	626523.GCWU000342_01027	498.0	0	Portal protein	N/A
Pfam	UHGV-0111275_19	PF04860	N/A	N/A	Phage portal protein	Phage_portal
COG	UHGV-0111275_19	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0111275_19	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-0111275_20	phrog_9	378.4	0	terminase large subunit	head and packaging
UniRef90	UHGV-0111275_20	UniRef90_A0A1Y3W5R1	788.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0111275_20	1203606.HMPREF1526_00981	735.0	0	Terminase	N/A
Pfam	UHGV-0111275_20	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0111275_20	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0111275_20	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0111275_20	PF20441,PF03354,MF_04145,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0111275_21	phrog_1066	129.1	1.7e-38	N/A	unknown function
eggNOG-mapper	UHGV-0111275_21	1341151.ASZU01000004_gene265	124.0	3.27e-35	N/A	N/A
structural_annotation	UHGV-0111275_21	PF05119,TIGR01558	N/A	N/A	N/A	N/A
PHROG	UHGV-0111275_22	phrog_119	48.1	0.00000000000016	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0111275_22	UniRef90_A0A174XSZ8	125.0	4.14e-35	Prophage LambdaBa04, GP54	N/A
eggNOG-mapper	UHGV-0111275_22	1235793.C809_01915	119.0	3.49e-33	HNH endonuclease	N/A
Pfam	UHGV-0111275_22	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-0111275_22	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
eggNOG-mapper	UHGV-0111275_23	1297617.JPJD01000059_gene2640	80.9	1.14e-17	N/A	N/A
structural_annotation	UHGV-0111275_23	PF06530,TIGR01636	N/A	N/A	N/A	N/A
PHROG	UHGV-0111275_24	phrog_3584	116.9	1.4e-34	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0111275_24	537013.CLOSTMETH_02141	62.4	0.00000000451	N/A	N/A
structural_annotation	UHGV-0111275_24	PF21578,MF_00360	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0111275_30	PF10013	N/A	N/A	N/A	N/A
PHROG	UHGV-0111275_32	phrog_190	106.5	2.6e-31	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0111275_32	UniRef90_UPI0006C2AC63	129.0	2.16e-35	N/A	N/A
eggNOG-mapper	UHGV-0111275_32	693746.OBV_25250	121.0	5.76e-33	N/A	N/A
Pfam	UHGV-0111275_32	PF06356	N/A	N/A	N/A	DUF1064
structural_annotation	UHGV-0111275_32	PF06356	N/A	N/A	N/A	N/A
PHROG	UHGV-0111275_36	phrog_38832	80.5	4.7e-25	N/A	unknown function
eggNOG-mapper	UHGV-0111275_36	665956.HMPREF1032_03087	91.7	2.07e-21	N/A	N/A
structural_annotation	UHGV-0111275_36	PF11717,TIGR02450	N/A	N/A	N/A	N/A
PHROG	UHGV-0111275_38	phrog_38832	75.7	5.4e-22	N/A	unknown function
eggNOG-mapper	UHGV-0111275_38	665956.HMPREF1032_03087	111.0	2.32e-29	N/A	N/A
PHROG	UHGV-0111275_39	phrog_3136	145.3	1.4013e-43	N/A	unknown function
UniRef90	UHGV-0111275_39	UniRef90_A0A329TS47	158.0	1.4013e-45	ASCH domain-containing protein	N/A
eggNOG-mapper	UHGV-0111275_39	714943.Mucpa_2008	52.0	0.00000491	ASCH	N/A
Pfam	UHGV-0111275_39	PF04266	N/A	N/A	ASCH domain	ASCH
COG	UHGV-0111275_39	COG4933	N/A	N/A	Predicted transcriptional regulator, contains an HTH and PUA-like domains	N/A
structural_annotation	UHGV-0111275_39	PF08819,MF_00684,NF008917,COG4933	N/A	N/A	N/A	N/A
PHROG	UHGV-0111275_40	phrog_1384	121.8	5.1e-36	Mom-like DNA modification protein	other
eggNOG-mapper	UHGV-0111275_40	665956.HMPREF1032_03086	281.0	0	COG NOG12663 non supervised orthologous group	N/A
structural_annotation	UHGV-0111275_40	PF11124,MF_02210,NF040502,COG3818	N/A	N/A	N/A	N/A
PHROG	UHGV-0111275_42	phrog_424	77.3	1.9e-22	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
eggNOG-mapper	UHGV-0111275_42	445972.ANACOL_01819	497.0	0	Phosphoadenosine phosphosulfate reductase family	N/A
COG	UHGV-0111275_42	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-0111275_42	PF01507,MF_00064,NF010367,COG0175	N/A	N/A	N/A	N/A
KOfam	UHGV-0111275_44	K00571	122.7	4e-36	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	N/A
PHROG	UHGV-0111275_44	phrog_67	102.0	3.2e-30	DNA methyltransferase	other
UniRef90	UHGV-0111275_44	UniRef90_A0A2U1CFM2	416.0	0	Methyltransferase	N/A
eggNOG-mapper	UHGV-0111275_44	411468.CLOSCI_00299	360.0	0	DNA methylase	N/A
PADLOC	UHGV-0111275_44	MTase_II_00157	93.6	2.7e-27	Type II methyltransferase	RM
Pfam	UHGV-0111275_44	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-0111275_44	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-0111275_44	PF01555,MF_01872,NF010253,COG0863	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0111275_47	PF05082	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0111275_49	PF10548	N/A	N/A	N/A	N/A
PHROG	UHGV-0111275_51	phrog_478	134.6	3.4e-40	site-specific recombination directionality factor RDF	integration and excision
UniRef90	UHGV-0111275_51	UniRef90_A0A373Q857	164.0	0	YopX domain-containing protein	N/A
eggNOG-mapper	UHGV-0111275_51	1111121.HMPREF1247_0834	100.0	3.59e-25	N/A	N/A
eggNOG-mapper	UHGV-0111275_52	642492.Clole_0961	70.9	0.00000000000000265	N/A	N/A
structural_annotation	UHGV-0111275_52	PF12286	N/A	N/A	N/A	N/A
KOfam	UHGV-0111275_56	K22300	54.7	0.0000000000000025	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0111275_56	phrog_4	50.0	0.000000000000078	transcriptional repressor	transcription regulation
UniRef90	UHGV-0111275_56	UniRef90_A0A2U1BEG8	119.0	1.9e-32	Helix-turn-helix protein	N/A
eggNOG-mapper	UHGV-0111275_56	1235797.C816_03553	107.0	7.27e-28	DNA-binding helix-turn-helix protein	N/A
PADLOC	UHGV-0111275_56	retron_type_VI_hth_cluster2_1	42.3	0.000000000016	N/A	Retron
Pfam	UHGV-0111275_56	PF12844	N/A	N/A	Helix-turn-helix domain	HTH_19
COG	UHGV-0111275_56	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0111275_56	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-0111275_58	phrog_10292	76.2	2.8e-22	N/A	unknown function
UniRef90	UHGV-0111275_58	UniRef90_A0A416W984	92.0	2.9e-21	TM2 domain-containing protein	N/A
eggNOG-mapper	UHGV-0111275_58	537013.CLOSTMETH_02269	82.8	4.95e-18	TM2 domain	N/A
Pfam	UHGV-0111275_58	PF13240	N/A	N/A	zinc-ribbon domain	zinc_ribbon_2
Pfam	UHGV-0111275_58	PF05154	N/A	N/A	TM2 domain	TM2
COG	UHGV-0111275_58	COG2314	N/A	N/A	N/A	N/A
UniRef90	UHGV-0111275_59	UniRef90_A0A810PZB1	69.7	0.00000000000518	HTH cro/C1-type domain-containing protein	N/A
Pfam	UHGV-0111275_59	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0111275_59	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0111275_59	PF12844,MF_00535,NF041677,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0111275_60	K06400	377.4	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-0111275_60	phrog_95	363.5	0	integrase	integration and excision
UniRef90	UHGV-0111275_60	UniRef90_UPI00189960B8	503.0	0	recombinase family protein	N/A
eggNOG-mapper	UHGV-0111275_60	1235835.C814_00825	404.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-0111275_60	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-0111275_60	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-0111275_60	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-0111275_60	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0111275_60	PF07508,PF00239,NF041201,COG1961	N/A	N/A	N/A	N/A
UniRef90	UHGV-0111275_61	UniRef90_A0A7M1RTM1	80.5	7.73e-16	RNA polymerase sigma factor/ubiquitin-like protein	N/A
eggNOG-mapper	UHGV-0111275_61	1378168.N510_03079	70.9	0.00000000000148	N/A	N/A
structural_annotation	UHGV-0111275_64	PF13412,MF_00674,COG1342	N/A	N/A	N/A	N/A
UniRef90	UHGV-0111275_65	UniRef90_H1CEM5	223.0	0	SH3b domain-containing protein	N/A
eggNOG-mapper	UHGV-0111275_65	525254.HMPREF0072_1273	216.0	0	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase	N/A
COG	UHGV-0111275_65	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
structural_annotation	UHGV-0111275_65	NF033743	N/A	N/A	N/A	N/A
PHROG	UHGV-0111275_66	phrog_6918	94.8	6.1e-28	holin	lysis
UniRef90	UHGV-0111275_66	UniRef90_A0A316QCY7	99.4	5.7e-25	Holin	N/A
eggNOG-mapper	UHGV-0111275_66	1297617.JPJD01000020_gene301	97.8	3.99e-25	Bacteriophage holin of superfamily 6 (Holin_LLH)	N/A
Pfam	UHGV-0111275_66	PF09682	N/A	N/A	Bacteriophage holin of superfamily 6 (Holin_LLH)	Phage_holin_6_1
structural_annotation	UHGV-0111275_66	PF09682,TIGR01673	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0111275	Yes	36,606	57	100	1
UHGV-1748880	No	10,777	58	29	1