vOTU vOTU-083543

vOTU: vOTU-083543

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-083543
Number of genomes	2
Taxonomy (ICTV)
Taxonomy (UHGV)	vFAM-00118 → vSUBFAM-01094 → vGENUS-01434 → vSUBGEN-31793 → vOTU-083543
Host lineage
Host range breadth
Lifestyle	lytic (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1470427
Biosample ID	N/A
Genome length (bp)	54,929 bps
CheckV completeness	99.90% (High-quality)
CDS count	93
CDS density	89.71%
tRNA count	3
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method
CRISPR-predicted host lineage	Total connections	Host agreement
PHIST-predicted host lineage	Total connections	Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 99.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
Pfam	UHGV-1470427_2	PF04647	N/A	N/A	Accessory gene regulator B	AgrB
structural_annotation	UHGV-1470427_2	PF08281,NF001067,COG2739	N/A	N/A	N/A	N/A
PHROG	UHGV-1470427_3	phrog_4707	57.9	2.2e-16	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1470427_3	UniRef90_UPI001ADDA9E8	55.5	0.0000000968	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1470427_3	1476583.DEIPH_ctg011orf0054	60.8	0.00000000185	N/A	N/A
Pfam	UHGV-1470427_3	PF13730	N/A	N/A	Helix-turn-helix domain	HTH_36
COG	UHGV-1470427_3	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-1470427_3	PF03428,MF_01177,TIGR04176,COG3355	N/A	N/A	N/A	N/A
PHROG	UHGV-1470427_6	phrog_21718	70.0	3.6e-20	N/A	unknown function
eggNOG-mapper	UHGV-1470427_6	397290.C810_05210	58.9	0.00000000956	N/A	N/A
PHROG	UHGV-1470427_8	phrog_16490	90.8	4.6e-29	N/A	unknown function
eggNOG-mapper	UHGV-1470427_8	658655.HMPREF0988_00917	118.0	9.91e-30	N/A	N/A
eggNOG-mapper	UHGV-1470427_9	658655.HMPREF0988_00916	130.0	4.45e-37	N/A	N/A
eggNOG-mapper	UHGV-1470427_10	1378168.N510_03079	56.2	0.00000114	N/A	N/A
eggNOG-mapper	UHGV-1470427_20	1378168.N510_02383	78.2	2.23e-16	N/A	N/A
KOfam	UHGV-1470427_21	K17680	75.4	5.1e-22	PEO1; twinkle protein [EC:5.6.2.3]	N/A
PHROG	UHGV-1470427_21	phrog_239	74.5	1.3e-21	DNA primase/helicase	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1470427_21	500633.CLOHIR_00351	75.1	0.00000000000446	DNA helicase	N/A
COG	UHGV-1470427_21	COG0305	N/A	N/A	Replicative DNA helicase	N/A
structural_annotation	UHGV-1470427_21	PF03796,MF_04154,NF006443,COG0305	N/A	N/A	N/A	N/A
PHROG	UHGV-1470427_24	phrog_986	72.1	7.1e-21	RNA-binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1470427_24	UniRef90_A0A256LHR9	81.3	1.93e-18	RNA-binding protein	N/A
eggNOG-mapper	UHGV-1470427_24	226185.EF_2118	73.2	0.00000000000000486	N/A	N/A
Pfam	UHGV-1470427_24	PF12961	N/A	N/A	N/A	DUF3850
structural_annotation	UHGV-1470427_24	PF12961,MF_00684,NF003443,COG4043	N/A	N/A	N/A	N/A
PHROG	UHGV-1470427_25	phrog_335	111.8	5.9e-33	phosphatase	other
UniRef90	UHGV-1470427_25	UniRef90_UPI00067E78B7	126.0	3.31e-34	macro domain-containing protein	N/A
eggNOG-mapper	UHGV-1470427_25	411902.CLOBOL_02960	92.8	1.1e-21	Macro domain	N/A
PADLOC	UHGV-1470427_25	darG	53.9	0.0000000000000033	N/A	N/A
Pfam	UHGV-1470427_25	PF01661	N/A	N/A	Macro domain	Macro
COG	UHGV-1470427_25	COG2110	N/A	N/A	O-acetyl-ADP-ribose deacetylase (regulator of RNase III), contains Macro domain	N/A
structural_annotation	UHGV-1470427_25	PF20016,MF_01205,NF001666,COG2110	N/A	N/A	N/A	N/A
KOfam	UHGV-1470427_26	K07319	162.1	0	yhdJ; adenine-specific DNA-methyltransferase [EC:2.1.1.72]	N/A
PHROG	UHGV-1470427_26	phrog_498	102.4	5.3e-30	DNA methyltransferase	other
UniRef90	UHGV-1470427_26	UniRef90_UPI00069B82E5	137.0	7.77e-37	DNA methyltransferase	N/A
eggNOG-mapper	UHGV-1470427_26	1382306.JNIM01000001_gene819	137.0	1.3e-37	DNA methylase	N/A
PADLOC	UHGV-1470427_26	MTase_II_00014	146.2	3.60134e-43	Type II methyltransferase	RM
Pfam	UHGV-1470427_26	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-1470427_26	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-1470427_26	PF01555,MF_01872,NF008572,COG0863	N/A	N/A	N/A	N/A
COG	UHGV-1470427_27	COG1802	N/A	N/A	DNA-binding transcriptional regulator, GntR family	N/A
PHROG	UHGV-1470427_29	phrog_3490	89.5	3.5e-26	ERCC4-type nuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1470427_29	UniRef90_UPI001D0995BC	83.2	6.08e-17	ERCC4 domain-containing protein	N/A
eggNOG-mapper	UHGV-1470427_29	887325.HMPREF0381_0094	64.3	0.000000000143	N/A	N/A
structural_annotation	UHGV-1470427_29	PF03834,NF040956,COG1948	N/A	N/A	N/A	N/A
PHROG	UHGV-1470427_31	phrog_10048	60.5	1.8e-28	N/A	unknown function
eggNOG-mapper	UHGV-1470427_31	1111134.HMPREF1253_1200	112.0	1.37e-27	N/A	N/A
structural_annotation	UHGV-1470427_31	PF04404,TIGR00607,COG5055	N/A	N/A	N/A	N/A
PHROG	UHGV-1470427_32	phrog_298	107.2	7.6e-32	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1470427_32	UniRef90_A0A6J5LGN0	68.2	0.000000000276	PD-(D/E)XK nuclease superfamily	N/A
eggNOG-mapper	UHGV-1470427_32	1305732.JAGG01000001_gene1576	66.2	0.000000000233	PD-(D/E)XK nuclease superfamily	N/A
COG	UHGV-1470427_32	COG1074	N/A	N/A	3'-5' helicase subunit RecB of the DNA repair enzyme RecBCD (exonuclease V)	N/A
structural_annotation	UHGV-1470427_32	PF12705,MF_03030,TIGR00372,COG2887	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1470427_37	PF14173	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1470427_47	1287476.HMPREF1651_10420	57.4	0.0000000167	N/A	N/A
KOfam	UHGV-1470427_50	K01258	56.8	8.9e-25	pepT; tripeptide aminopeptidase [EC:3.4.11.4]	N/A
PHROG	UHGV-1470427_50	phrog_34186	138.4	7.09996e-41	N/A	unknown function
UniRef90	UHGV-1470427_50	UniRef90_A0A1T4Y6L2	231.0	0	Peptidase family M28	N/A
eggNOG-mapper	UHGV-1470427_50	411467.BACCAP_03129	201.0	0	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls	N/A
Pfam	UHGV-1470427_50	PF04389	N/A	N/A	Peptidase family M28	Peptidase_M28
COG	UHGV-1470427_50	COG0624	N/A	N/A	Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase or related deacylase	N/A
structural_annotation	UHGV-1470427_50	PF05343,MF_00550,TIGR01883,COG1363	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1470427_51	411467.BACCAP_03130	131.0	6.27e-30	N/A	N/A
PHROG	UHGV-1470427_66	phrog_38	98.0	8.2e-29	terminase large subunit	head and packaging
UniRef90	UHGV-1470427_66	UniRef90_A0A1S9I916	71.6	0.00000000197	Terminase_6C domain-containing protein	N/A
eggNOG-mapper	UHGV-1470427_66	428127.EUBDOL_01551	151.0	3.93e-38	chromosome segregation	N/A
COG	UHGV-1470427_66	COG5410	N/A	N/A	N/A	N/A
PHROG	UHGV-1470427_68	phrog_64	122.9	1.9e-36	portal protein	head and packaging
UniRef90	UHGV-1470427_68	UniRef90_UPI0013EDE607	137.0	2.37e-31	phage portal protein	N/A
eggNOG-mapper	UHGV-1470427_68	1121866.AUGK01000003_gene1429	142.0	4.14e-34	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-1470427_68	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1470427_68	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-1470427_70	phrog_909	43.8	0.0000000000035	major head protein	head and packaging
UniRef90	UHGV-1470427_70	UniRef90_A0A0A8JLJ9	51.2	0.00000554	N/A	N/A
PHROG	UHGV-1470427_71	phrog_29	164.9	0	major head protein	head and packaging
UniRef90	UHGV-1470427_71	UniRef90_A0A2K9P3U0	220.0	0	Phage major capsid protein E	N/A
eggNOG-mapper	UHGV-1470427_71	1232443.BAIA02000078_gene29	197.0	0	Phage major capsid protein E	N/A
Pfam	UHGV-1470427_71	PF03864	N/A	N/A	Phage major capsid protein E	Phage_cap_E
structural_annotation	UHGV-1470427_71	PF03864,MF_04133,NF041162,COG4653	N/A	N/A	N/A	N/A
Pfam	UHGV-1470427_73	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
PHROG	UHGV-1470427_77	phrog_158	46.4	0.00000000000071	major tail protein	tail
UniRef90	UHGV-1470427_77	UniRef90_UPI00189AB4AD	101.0	2.21e-24	phage tail protein	N/A
eggNOG-mapper	UHGV-1470427_77	1232453.BAIF02000058_gene1634	69.7	0.000000000000707	N/A	N/A
structural_annotation	UHGV-1470427_77	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1470427_80	phrog_28918	47.4	0.0000000000000068	N/A	unknown function
eggNOG-mapper	UHGV-1470427_80	1121866.AUGK01000003_gene1437	90.1	0.00000000000000203	phage tail tape measure protein	N/A
COG	UHGV-1470427_80	COG1280	N/A	N/A	Threonine/homoserine/homoserine lactone efflux protein	N/A
Pfam	UHGV-1470427_81	PF09479	N/A	N/A	Listeria-Bacteroides repeat domain (List_Bact_rpt)	Flg_new
structural_annotation	UHGV-1470427_81	PF20458,TIGR02126,COG5437	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1470427_87	411473.RUMCAL_00420	80.5	0.000000000000238	nuclear chromosome segregation	N/A
COG	UHGV-1470427_87	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1470427	Yes	54,929	43	100	1
UHGV-0090067	No	54,929	43	100	1