vOTU vOTU-083552

vOTU: vOTU-083552

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-083552
Number of genomes	4
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00005 → vSUBFAM-00346 → vGENUS-00244 → vSUBGEN-40126 → vOTU-083552
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Angelakisella
Host range breadth	Genus
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1536931
Biosample ID	SAMEA2159881
Genome length (bp)	40,669 bps
CheckV completeness	99.90% (High-quality)
CDS count	51
CDS density	95.03%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Angelakisella	Total connections	39	Host agreement	89.74
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Angelakisella → Angelakisella sp900547385	Total connections	8	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 99.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1536931_1	phrog_14770	102.1	1.1e-30	N/A	unknown function
eggNOG-mapper	UHGV-1536931_1	445971.ANASTE_00728	284.0	0	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair	N/A
Pfam	UHGV-1536931_1	PF18760	N/A	N/A	ADP-Ribosyltransferase in polyvalent proteins	ART-PolyVal
Pfam	UHGV-1536931_1	PF18857	N/A	N/A	Large polyvalent protein associated domain 38	LPD38
COG	UHGV-1536931_1	COG0503	N/A	N/A	Adenine/guanine phosphoribosyltransferase or related PRPP-binding protein	N/A
structural_annotation	UHGV-1536931_2	MF_01304	N/A	N/A	N/A	N/A
KOfam	UHGV-1536931_3	K01448	58.8	8e-17	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-1536931_3	phrog_435	72.2	9.3e-21	endolysin	lysis
UniRef90	UHGV-1536931_3	UniRef90_A0A2V2GRI9	473.0	0	MurNAc-LAA domain-containing protein	N/A
eggNOG-mapper	UHGV-1536931_3	697281.Mahau_0053	92.8	4.59e-20	n-acetylmuramoyl-l-alanine amidase	N/A
Pfam	UHGV-1536931_3	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
COG	UHGV-1536931_3	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-1536931_3	PF01520,MF_00562,TIGR02883,COG0860	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1536931_4	1347392.CCEZ01000043_gene405	55.5	0.0000000147	N/A	N/A
PHROG	UHGV-1536931_5	phrog_1863	64.9	7.4e-19	N/A	unknown function
eggNOG-mapper	UHGV-1536931_5	718252.FP2_04900	79.7	1.45e-18	N/A	N/A
KOfam	UHGV-1536931_6	K06871	202.6	0	N/A	N/A
PHROG	UHGV-1536931_6	phrog_1802	154.7	0	radical SAM domain-containing protein	other
UniRef90	UHGV-1536931_6	UniRef90_A0A174B214	414.0	0	Anaerobic sulfatase-maturase	N/A
eggNOG-mapper	UHGV-1536931_6	457412.RSAG_01114	415.0	0	4Fe-4S single cluster domain	N/A
Pfam	UHGV-1536931_6	PF04055	N/A	N/A	Radical SAM superfamily	Radical_SAM
NCBIFam	UHGV-1536931_6	TIGR04115.1	N/A	N/A	radical SAM peptide maturase, CXXX-repeat target family	N/A
COG	UHGV-1536931_6	COG0641	N/A	N/A	Sulfatase maturation enzyme AslB, radical SAM superfamily	N/A
structural_annotation	UHGV-1536931_6	PF00962,MF_00660,TIGR04115,COG0641	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1536931_7	PF13801,TIGR04116,COG5420	N/A	N/A	N/A	N/A
KOfam	UHGV-1536931_10	K08131	214.8	0	COL9A; collagen type IX alpha	N/A
PHROG	UHGV-1536931_10	phrog_819	149.1	0	tail protein	tail
UniRef90	UHGV-1536931_10	UniRef90_A0A8D9PE13	662.0	0	Virion structural protein	N/A
Pfam	UHGV-1536931_10	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
COG	UHGV-1536931_10	COG4675	N/A	N/A	Phage tail collar domain	N/A
PHROG	UHGV-1536931_11	phrog_3287	128.2	4.5e-38	virion structural protein	head and packaging
eggNOG-mapper	UHGV-1536931_11	665956.HMPREF1032_03917	483.0	0	N/A	N/A
structural_annotation	UHGV-1536931_11	PF11134,MF_01282,TIGR03300,COG5276	N/A	N/A	N/A	N/A
PHROG	UHGV-1536931_13	phrog_15239	41.7	0.000000000016	N/A	unknown function
PHROG	UHGV-1536931_14	phrog_1357	243.7	0	major head protein	head and packaging
UniRef90	UHGV-1536931_14	UniRef90_A0A8D9UHB3	599.0	0	Major capsid protein	N/A
eggNOG-mapper	UHGV-1536931_14	696281.Desru_1092	290.0	0	N/A	N/A
NCBIFam	UHGV-1536931_14	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-1536931_14	PF13252,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
UniRef90	UHGV-1536931_15	UniRef90_A0A8D9UHB9	415.0	0	Non-structural protein 5	N/A
UniRef90	UHGV-1536931_16	UniRef90_A0A8D9UHD6	124.0	4.05e-36	Ogr/Delta-like zinc finger	N/A
structural_annotation	UHGV-1536931_16	PF20020	N/A	N/A	N/A	N/A
PHROG	UHGV-1536931_17	phrog_156	170.4	0	portal protein	head and packaging
UniRef90	UHGV-1536931_17	UniRef90_A0A8D9UHD1	1119.0	0	Portal protein	N/A
eggNOG-mapper	UHGV-1536931_17	1121091.AUMP01000003_gene2583	365.0	0	N/A	N/A
Pfam	UHGV-1536931_17	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1536931_17	PF16510,MF_04120,TIGR01538,COG5518	N/A	N/A	N/A	N/A
KOfam	UHGV-1536931_19	K06909	141.6	6.30024e-42	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1536931_19	phrog_979	163.0	0	terminase large subunit	head and packaging
UniRef90	UHGV-1536931_19	UniRef90_A0A8D9UH35	924.0	0	Large subunit terminase	N/A
eggNOG-mapper	UHGV-1536931_19	1232449.BAHV02000016_gene1824	481.0	0	N/A	N/A
Pfam	UHGV-1536931_19	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-1536931_19	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1536931_19	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
UniRef90	UHGV-1536931_20	UniRef90_A0A8D9UHF6	166.0	0	N/A	N/A
eggNOG-mapper	UHGV-1536931_20	272630.MexAM1_META1p3985	67.4	0.000000000000245	N/A	N/A
Pfam	UHGV-1536931_20	PF18932	N/A	N/A	N/A	DUF5681
PHROG	UHGV-1536931_21	phrog_7339	102.6	3.4e-30	DNA repair exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1536931_21	UniRef90_A0A2V2GLL9	528.0	0	Metallophos_2 domain-containing protein	N/A
eggNOG-mapper	UHGV-1536931_21	1150474.JQJI01000006_gene784	95.1	1.92e-20	metallophosphoesterase	N/A
Pfam	UHGV-1536931_21	PF00149	N/A	N/A	Calcineurin-like phosphoesterase	Metallophos
COG	UHGV-1536931_21	COG1408	N/A	N/A	Predicted phosphohydrolase, MPP superfamily	N/A
structural_annotation	UHGV-1536931_21	PF12850,MF_00325,NF003118,COG1311	N/A	N/A	N/A	N/A
PHROG	UHGV-1536931_23	phrog_36	42.9	0.0000000000087	transcriptional regulator	transcription regulation
UniRef90	UHGV-1536931_23	UniRef90_UPI001D0837DD	118.0	3.1e-31	N/A	N/A
structural_annotation	UHGV-1536931_23	PF07374,TIGR01636	N/A	N/A	N/A	N/A
PHROG	UHGV-1536931_25	phrog_22543	49.4	0.000000000000025	N/A	unknown function
UniRef90	UHGV-1536931_25	UniRef90_UPI00073F9737	64.3	0.0000000000948	N/A	N/A
structural_annotation	UHGV-1536931_26	PF14354	N/A	N/A	N/A	N/A
PHROG	UHGV-1536931_27	phrog_38832	47.7	0.00000000000028	N/A	unknown function
eggNOG-mapper	UHGV-1536931_27	665956.HMPREF1032_03087	52.0	0.000000733	N/A	N/A
PHROG	UHGV-1536931_28	phrog_954	203.6	0	DNA methyltransferase	other
UniRef90	UHGV-1536931_28	UniRef90_A0A810Q0N4	328.0	0	Methyltransferase	N/A
eggNOG-mapper	UHGV-1536931_28	1280698.AUJS01000007_gene1028	278.0	0	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA	N/A
PADLOC	UHGV-1536931_28	MTase_II_00074	204.8	0	Type II methyltransferase	RM
Pfam	UHGV-1536931_28	PF08241	N/A	N/A	Methyltransferase domain	Methyltransf_11
COG	UHGV-1536931_28	COG1092	N/A	N/A	23S rRNA G2069 N7-methylase RlmK or C1962 C5-methylase RlmI	N/A
structural_annotation	UHGV-1536931_28	PF05148,MF_03044,NF033398,COG1041	N/A	N/A	N/A	N/A
KOfam	UHGV-1536931_32	K01160	63.7	5e-18	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-1536931_32	phrog_34	69.1	7.2e-20	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1536931_32	UniRef90_A0A498CNH4	144.0	1.10983e-42	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-1536931_32	477974.Daud_0813	52.4	0.00000132	N/A	N/A
Pfam	UHGV-1536931_32	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
structural_annotation	UHGV-1536931_32	PF19595,NF007305,COG4570	N/A	N/A	N/A	N/A
KOfam	UHGV-1536931_33	K00558	168.9	0	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-1536931_33	phrog_116	210.1	0	DNA methyltransferase	other
UniRef90	UHGV-1536931_33	UniRef90_A0A316NA61	393.0	0	DNA (cytosine-5-)-methyltransferase	N/A
eggNOG-mapper	UHGV-1536931_33	718252.FP2_16350	391.0	0	C-5 cytosine-specific DNA methylase	N/A
PADLOC	UHGV-1536931_33	oMTase_00004	229.0	0	orphan methyltransferase	RM
Pfam	UHGV-1536931_33	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
NCBIFam	UHGV-1536931_33	TIGR00675.1	N/A	N/A	DNA (cytosine-5-)-methyltransferase	N/A
COG	UHGV-1536931_33	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
PHROG	UHGV-1536931_34	phrog_9804	167.1	0	N/A	unknown function
UniRef90	UHGV-1536931_34	UniRef90_UPI001E312ACC	363.0	0	replicative helicase loader/inhibitor	N/A
eggNOG-mapper	UHGV-1536931_34	1121344.JHZO01000003_gene981	178.0	0	Loader and inhibitor of phage G40P	N/A
Pfam	UHGV-1536931_34	PF11417	N/A	N/A	Loader and inhibitor of phage G40P	Inhibitor_G39P
structural_annotation	UHGV-1536931_34	PF11417	N/A	N/A	N/A	N/A
PHROG	UHGV-1536931_35	phrog_16304	90.1	2.6e-26	N/A	unknown function
UniRef90	UHGV-1536931_35	UniRef90_UPI001E560709	364.0	0	N/A	N/A
eggNOG-mapper	UHGV-1536931_35	290402.Cbei_3733	61.6	0.0000000135	DnaD domain protein	N/A
Pfam	UHGV-1536931_35	PF19808	N/A	N/A	N/A	DUF6291
COG	UHGV-1536931_35	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-1536931_35	PF19808	N/A	N/A	N/A	N/A
KOfam	UHGV-1536931_36	K03111	131.8	8e-39	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1536931_36	phrog_44	129.2	3e-38	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1536931_36	UniRef90_UPI001E2A5A6F	179.0	0	single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1536931_36	445972.ANACOL_01827	139.0	1.54e-40	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-1536931_36	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1536931_36	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1536931_36	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1536931_36	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1536931_36	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-1536931_37	phrog_7566	51.8	0.000000000000011	N/A	unknown function
eggNOG-mapper	UHGV-1536931_37	693746.OBV_24070	69.7	0.0000000000000683	N/A	N/A
PHROG	UHGV-1536931_38	phrog_72	63.0	4.5e-18	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1536931_38	UniRef90_UPI001F3F3E5C	144.0	1.36999e-40	recombination protein NinB	N/A
eggNOG-mapper	UHGV-1536931_38	445972.ANACOL_01825	129.0	1.4e-35	N/A	N/A
structural_annotation	UHGV-1536931_38	PF05772	N/A	N/A	N/A	N/A
PHROG	UHGV-1536931_39	phrog_14970	191.2	0	N/A	unknown function
UniRef90	UHGV-1536931_39	UniRef90_UPI00123F00F5	177.0	0	Rad52/Rad22 family DNA repair protein	N/A
eggNOG-mapper	UHGV-1536931_39	428127.EUBDOL_01248	154.0	2.52234e-44	double-strand break repair protein	N/A
Pfam	UHGV-1536931_39	PF04098	N/A	N/A	Rad52/22 family double-strand break repair protein	Rad52_Rad22
COG	UHGV-1536931_39	COG4712	N/A	N/A	Predicted ssDNA annealing protein, contains HHH motif, Rad42/Rad22/RecT/erf family	N/A
structural_annotation	UHGV-1536931_39	PF04098,TIGR00607,COG4712	N/A	N/A	N/A	N/A
PHROG	UHGV-1536931_41	phrog_4433	199.9	0	N/A	unknown function
eggNOG-mapper	UHGV-1536931_41	767434.Fraau_1460	115.0	1.88e-28	regulation of DNA-templated transcription, elongation	N/A
COG	UHGV-1536931_41	COG5164	N/A	N/A	Transcription elongation factor SPT5	N/A
structural_annotation	UHGV-1536931_44	NF041588	N/A	N/A	N/A	N/A
UniRef90	UHGV-1536931_46	UniRef90_A0A372V3V8	68.9	0.0000000000000452	XRE family transcriptional regulator	N/A
structural_annotation	UHGV-1536931_46	PF13560,NF041951,COG1396	N/A	N/A	N/A	N/A
UniRef90	UHGV-1536931_47	UniRef90_A0A372V3Y4	92.0	1.27e-21	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-1536931_47	1378168.N510_01712	78.6	6.35e-16	N/A	N/A
KOfam	UHGV-1536931_50	K14059	204.8	0	int; integrase	N/A
PHROG	UHGV-1536931_50	phrog_1	184.0	0	integrase	integration and excision
UniRef90	UHGV-1536931_50	UniRef90_A0A8D9PE11	346.0	0	Integrase	N/A
eggNOG-mapper	UHGV-1536931_50	693746.OBV_01970	155.0	4.65007e-41	Phage integrase family	N/A
Pfam	UHGV-1536931_50	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1536931_50	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1536931_50	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1536931	Yes	40,669	52	100	1
UHGV-0051604	No	40,986	52	100	1
UHGV-1466958	No	33,575	53	86	1
UHGV-0016563	No	24,844	53	64	1