vOTU vOTU-083576

vOTU: vOTU-083576

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-083576
Number of genomes	2
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae → CAG-217 → CAG-217 sp000436335
Taxonomy (UHGV)	vFAM-00035 → vSUBFAM-00258 → vGENUS-00437 → vSUBGEN-00218 → vOTU-083576
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae → CAG-217 → CAG-217 sp000436335
Host range breadth	Species
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0100648
Biosample ID	SAMEA3708631
Genome length (bp)	31,941 bps
CheckV completeness	99.24% (High-quality)
CDS count	47
CDS density	94.06%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae → CAG-217 → CAG-217 sp000436335	Total connections	301	Host agreement	99.34
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae → CAG-217 → CAG-217 sp000436335	Total connections	40	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 99.24)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0100648_1	K14059	219.4	0	int; integrase	N/A
PHROG	UHGV-0100648_1	phrog_1	200.6	0	integrase	integration and excision
UniRef90	UHGV-0100648_1	UniRef90_A0A316RE68	753.0	0	Tyr recombinase domain-containing protein	N/A
eggNOG-mapper	UHGV-0100648_1	1161902.HMPREF0378_0144	201.0	0	DNA integration	N/A
Pfam	UHGV-0100648_1	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0100648_1	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0100648_1	PF00589,PF13102,MF_01808,TIGR02224,COG4974	N/A	N/A	N/A	N/A
PHROG	UHGV-0100648_2	phrog_1847	462.5	0	N/A	unknown function
UniRef90	UHGV-0100648_2	UniRef90_R6INK9	788.0	0	T5orf172 domain-containing protein	N/A
eggNOG-mapper	UHGV-0100648_2	1232443.BAIA02000080_gene905	349.0	0	T5orf172	N/A
Pfam	UHGV-0100648_2	PF13250	N/A	N/A	N/A	DUF4041
Pfam	UHGV-0100648_2	PF13455	N/A	N/A	Meiotically up-regulated gene 113	MUG113
COG	UHGV-0100648_2	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
structural_annotation	UHGV-0100648_2	PF13250,PF19824	N/A	N/A	N/A	N/A
PHROG	UHGV-0100648_3	phrog_87	88.2	7.1e-26	metallo-protease	other
UniRef90	UHGV-0100648_3	UniRef90_A0A316RCR6	259.0	0	Peptidase_M78 domain-containing protein	N/A
eggNOG-mapper	UHGV-0100648_3	1507.HMPREF0262_00423	116.0	1.38e-31	IrrE N-terminal-like domain	N/A
Pfam	UHGV-0100648_3	PF06114	N/A	N/A	IrrE N-terminal-like domain	Peptidase_M78
COG	UHGV-0100648_3	COG2856	N/A	N/A	Zn-dependent peptidase ImmA, M78 family	N/A
structural_annotation	UHGV-0100648_3	PF06114,COG2856	N/A	N/A	N/A	N/A
KOfam	UHGV-0100648_4	K22299	48.8	0.00000000000017	rghR; HTH-type transcriptional regulator, competence development regulator	N/A
PHROG	UHGV-0100648_4	phrog_8	76.3	5.9e-22	transcriptional regulator	transcription regulation
UniRef90	UHGV-0100648_4	UniRef90_A0A1Q6LC39	171.0	0	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0100648_4	1507.HMPREF0262_00424	82.8	6.9e-19	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-0100648_4	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0100648_4	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0100648_4	PF12844,NF041951,COG1396	N/A	N/A	N/A	N/A
UniRef90	UHGV-0100648_5	UniRef90_A0A316R8G0	94.0	4.59e-24	HTH cro/C1-type domain-containing protein	N/A
Pfam	UHGV-0100648_5	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0100648_5	PF13560,NF041951,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-0100648_6	phrog_668	50.1	0.000000000000014	HTH DNA binding protein	DNA, RNA and nucleotide metabolism
KOfam	UHGV-0100648_7	K21919	41.3	0.000000000015	KCTD9; BTB/POZ domain-containing protein KCTD9	N/A
PHROG	UHGV-0100648_7	phrog_7713	84.0	7.3e-25	N/A	unknown function
UniRef90	UHGV-0100648_7	UniRef90_UPI001A9BFF4A	126.0	3.97e-33	pentapeptide repeat-containing protein	N/A
eggNOG-mapper	UHGV-0100648_7	1232443.BAIA02000078_gene49	122.0	6.42e-33	Pentapeptide repeat protein	N/A
Pfam	UHGV-0100648_7	PF00805	N/A	N/A	Pentapeptide repeats (8 copies)	Pentapeptide
Pfam	UHGV-0100648_7	PF19062	N/A	N/A	N/A	DUF5758
COG	UHGV-0100648_7	COG1357	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0100648_7	PF19062	N/A	N/A	N/A	N/A
PHROG	UHGV-0100648_8	phrog_33952	201.3	0	N/A	unknown function
PHROG	UHGV-0100648_10	phrog_3584	162.3	0	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0100648_10	642492.Clole_0725	121.0	8.01e-31	N/A	N/A
structural_annotation	UHGV-0100648_10	PF21578	N/A	N/A	N/A	N/A
PHROG	UHGV-0100648_11	phrog_34937	217.1	0	N/A	unknown function
PHROG	UHGV-0100648_12	phrog_190	111.8	5.1e-33	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0100648_12	UniRef90_R6ISF1	267.0	0	N/A	N/A
eggNOG-mapper	UHGV-0100648_12	563031.HMPREF0666_01122	91.3	8.52e-22	N/A	N/A
Pfam	UHGV-0100648_12	PF06356	N/A	N/A	N/A	DUF1064
structural_annotation	UHGV-0100648_12	PF06356	N/A	N/A	N/A	N/A
PHROG	UHGV-0100648_15	phrog_35860	47.5	0.00000000000028	N/A	unknown function
eggNOG-mapper	UHGV-0100648_15	742740.HMPREF9474_03120	57.0	0.000000045	PcfK-like protein	N/A
Pfam	UHGV-0100648_15	PF14058	N/A	N/A	PcfK-like protein	PcfK
structural_annotation	UHGV-0100648_15	PF14058	N/A	N/A	N/A	N/A
PHROG	UHGV-0100648_16	phrog_8470	474.3	0	N/A	unknown function
UniRef90	UHGV-0100648_16	UniRef90_UPI001C0AE9DA	174.0	1.68156e-44	PcfJ domain-containing protein	N/A
eggNOG-mapper	UHGV-0100648_16	1117108.PAALTS15_13637	154.0	6.67e-38	PcfJ-like protein	N/A
Pfam	UHGV-0100648_16	PF14284	N/A	N/A	PcfJ-like protein	PcfJ
structural_annotation	UHGV-0100648_16	PF14284	N/A	N/A	N/A	N/A
PHROG	UHGV-0100648_17	phrog_15609	342.6	0	N/A	unknown function
eggNOG-mapper	UHGV-0100648_17	1514668.JOOA01000001_gene225	89.0	3.08e-17	N/A	N/A
structural_annotation	UHGV-0100648_17	PF11300,NF038070	N/A	N/A	N/A	N/A
PHROG	UHGV-0100648_21	phrog_1558	52.8	2.8e-20	N/A	unknown function
UniRef90	UHGV-0100648_21	UniRef90_A0A316RAK3	206.0	0	Sigma70_r4_2 domain-containing protein	N/A
eggNOG-mapper	UHGV-0100648_21	411459.RUMOBE_01740	55.5	0.000000073	N/A	N/A
Pfam	UHGV-0100648_21	PF08281	N/A	N/A	Sigma-70, region 4	Sigma70_r4_2
structural_annotation	UHGV-0100648_21	PF06530,NF008895,COG1595	N/A	N/A	N/A	N/A
PHROG	UHGV-0100648_22	phrog_144	94.9	8.5e-28	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0100648_22	UniRef90_A0A844FGQ3	110.0	3.4e-28	HNH endonuclease	N/A
eggNOG-mapper	UHGV-0100648_22	411459.RUMOBE_01739	111.0	1.28e-29	N/A	N/A
PHROG	UHGV-0100648_23	phrog_83	63.2	5.3e-18	terminase small subunit	head and packaging
UniRef90	UHGV-0100648_23	UniRef90_A0A316RD76	328.0	0	Phage terminase small subunit P27 family	N/A
eggNOG-mapper	UHGV-0100648_23	742741.HMPREF9475_00421	125.0	2.92e-34	Phage terminase, small subunit	N/A
Pfam	UHGV-0100648_23	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
COG	UHGV-0100648_23	COG3747	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0100648_23	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
PHROG	UHGV-0100648_24	phrog_9	352.9	0	terminase large subunit	head and packaging
UniRef90	UHGV-0100648_24	UniRef90_A0A316R7M0	1146.0	0	Terminase large subunit	N/A
eggNOG-mapper	UHGV-0100648_24	411459.RUMOBE_01737	711.0	0	N/A	N/A
Pfam	UHGV-0100648_24	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0100648_24	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0100648_24	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0100648_24	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0100648_25	phrog_12	300.0	0	portal protein	head and packaging
UniRef90	UHGV-0100648_25	UniRef90_A0A316R7D3	840.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0100648_25	411459.RUMOBE_01735	446.0	0	N/A	N/A
Pfam	UHGV-0100648_25	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-0100648_25	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-0100648_25	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0100648_25	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-0100648_26	K01358	104.0	2.4e-30	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-0100648_26	phrog_94	172.4	0	head maturation protease	head and packaging
UniRef90	UHGV-0100648_26	UniRef90_A0A316R8I3	487.0	0	Clp protease	N/A
eggNOG-mapper	UHGV-0100648_26	742741.HMPREF9475_00424	200.0	0	Clp protease	N/A
Pfam	UHGV-0100648_26	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-0100648_26	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-0100648_26	PF00574,MF_00444,NF011090,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-0100648_27	phrog_10	181.6	0	major head protein	head and packaging
UniRef90	UHGV-0100648_27	UniRef90_A0A316RM35	589.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-0100648_27	411459.RUMOBE_01733	312.0	0	phage phi-C31 gp36 major capsid-like protein	N/A
Pfam	UHGV-0100648_27	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0100648_27	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0100648_27	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0100648_27	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
UniRef90	UHGV-0100648_28	UniRef90_A0A316R9F5	179.0	0	Phage gp6-like head-tail connector protein	N/A
eggNOG-mapper	UHGV-0100648_28	411459.RUMOBE_01732	75.5	1.2e-16	N/A	N/A
Pfam	UHGV-0100648_28	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
NCBIFam	UHGV-0100648_28	TIGR01560.2	N/A	N/A	head-tail connector protein	N/A
structural_annotation	UHGV-0100648_28	PF05135,TIGR01560	N/A	N/A	N/A	N/A
UniRef90	UHGV-0100648_29	UniRef90_A0A316R8D9	219.0	0	Phage head-tail adapter protein	N/A
eggNOG-mapper	UHGV-0100648_29	195103.CPF_1582	67.4	0.000000000000463	Phage head-tail adaptor	N/A
Pfam	UHGV-0100648_29	PF05521	N/A	N/A	Phage head-tail joining protein	Phage_H_T_join
NCBIFam	UHGV-0100648_29	TIGR01563.1	N/A	N/A	phage head closure protein	N/A
structural_annotation	UHGV-0100648_29	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0100648_30	phrog_5	41.8	0.000000000022	tail completion or Neck1 protein	connector
UniRef90	UHGV-0100648_30	UniRef90_A0A174MCG9	96.7	1.02e-22	Phage protein, HK97 gp10 family	N/A
eggNOG-mapper	UHGV-0100648_30	411459.RUMOBE_01730	96.7	1.7e-23	Phage protein, HK97 gp10 family	N/A
NCBIFam	UHGV-0100648_30	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
structural_annotation	UHGV-0100648_30	PF04883,TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-0100648_31	phrog_78	50.4	0.000000000000048	tail terminator	connector
eggNOG-mapper	UHGV-0100648_31	411468.CLOSCI_01495	94.7	2.03e-23	N/A	N/A
structural_annotation	UHGV-0100648_31	PF05657,NF040576,COG3167	N/A	N/A	N/A	N/A
PHROG	UHGV-0100648_32	phrog_88	138.4	3.89995e-41	major tail protein	tail
UniRef90	UHGV-0100648_32	UniRef90_A0A316RAJ2	392.0	0	Major tail protein	N/A
eggNOG-mapper	UHGV-0100648_32	411459.RUMOBE_01728	229.0	0	phage major tail protein, phi13 family	N/A
NCBIFam	UHGV-0100648_32	TIGR01603.1	N/A	N/A	major tail protein	N/A
COG	UHGV-0100648_32	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0100648_32	PF04630,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-0100648_33	phrog_13494	59.1	6.6e-17	N/A	unknown function
eggNOG-mapper	UHGV-0100648_33	742741.HMPREF9475_00431	53.5	0.000000127	N/A	N/A
PHROG	UHGV-0100648_34	phrog_25901	74.9	1.6e-21	N/A	unknown function
eggNOG-mapper	UHGV-0100648_34	411468.CLOSCI_01498	65.1	0.000000000035	N/A	N/A
KOfam	UHGV-0100648_35	K10421	44.0	0.0000000000011	CLIP1, RSN; CAP-Gly domain-containing linker protein 1	N/A
PHROG	UHGV-0100648_35	phrog_1533	517.8	0	tail length tape measure protein	tail
UniRef90	UHGV-0100648_35	UniRef90_A0A316R7C3	912.0	0	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-0100648_35	35241.Q9AYV8_BPTU2	391.0	0	peptidoglycan catabolic process	N/A
Pfam	UHGV-0100648_35	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
NCBIFam	UHGV-0100648_35	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
PHROG	UHGV-0100648_36	phrog_33	77.5	3e-22	distal tail protein Dit	tail
UniRef90	UHGV-0100648_36	UniRef90_UPI0019689066	100.0	4.36e-22	phage tail protein	N/A
eggNOG-mapper	UHGV-0100648_36	1232452.BAIB02000007_gene1615	139.0	7.81e-38	phage tail	N/A
Pfam	UHGV-0100648_36	PF05709	N/A	N/A	Phage tail protein RIFT-related domain	Sipho_tail
NCBIFam	UHGV-0100648_36	TIGR01633.1	N/A	N/A	distal tail protein Dit	N/A
COG	UHGV-0100648_36	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0100648_36	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0100648_37	phrog_1067	121.7	0	minor head protein	head and packaging
UniRef90	UHGV-0100648_37	UniRef90_A0A316RM27	942.0	0	Prophage_tail domain-containing protein	N/A
eggNOG-mapper	UHGV-0100648_37	1235798.C817_04594	117.0	6.34e-25	Prophage endopeptidase tail	N/A
Pfam	UHGV-0100648_37	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-0100648_37	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0100648_37	COG4926	N/A	N/A	Phage-related protein	N/A
UniRef90	UHGV-0100648_38	UniRef90_A0A316R9D9	1098.0	0	BppU_N domain-containing protein	N/A
eggNOG-mapper	UHGV-0100648_38	641107.CDLVIII_4353	59.7	0.0000002	N/A	N/A
Pfam	UHGV-0100648_38	PF10651	N/A	N/A	BppU N-terminal domain	BppU_N
structural_annotation	UHGV-0100648_38	PF00386,NF033147	N/A	N/A	N/A	N/A
UniRef90	UHGV-0100648_39	UniRef90_R6J123	110.0	1.46e-30	ATP synthase B chain	N/A
PHROG	UHGV-0100648_40	phrog_4105	80.1	2e-23	N/A	unknown function
eggNOG-mapper	UHGV-0100648_40	610130.Closa_0762	69.7	0.0000000000000806	N/A	N/A
PHROG	UHGV-0100648_41	phrog_263	89.8	1.8e-26	holin	lysis
UniRef90	UHGV-0100648_41	UniRef90_R6JQI4	154.0	0	Holin SPP1 family	N/A
eggNOG-mapper	UHGV-0100648_41	1297617.JPJD01000099_gene2175	75.5	7.05e-17	SPP1 phage holin	N/A
Pfam	UHGV-0100648_41	PF04688	N/A	N/A	SPP1 phage holin	Holin_SPP1
NCBIFam	UHGV-0100648_41	TIGR01592.1	N/A	N/A	phage holin	N/A
structural_annotation	UHGV-0100648_41	PF04688	N/A	N/A	N/A	N/A
UniRef90	UHGV-0100648_42	UniRef90_R6J3S0	570.0	0	Peptidase_C39_2 domain-containing protein	N/A
Pfam	UHGV-0100648_42	PF13529	N/A	N/A	Peptidase_C39 like family	Peptidase_C39_2
structural_annotation	UHGV-0100648_42	PF11814,NF033920,COG4990	N/A	N/A	N/A	N/A
UniRef90	UHGV-0100648_44	UniRef90_A0A315YPS7	76.6	0.00000000000000784	Helix-turn-helix protein	N/A
eggNOG-mapper	UHGV-0100648_44	1280668.ATVT01000007_gene1190	52.0	0.00000054	sequence-specific DNA binding	N/A
COG	UHGV-0100648_44	COG2944	N/A	N/A	DNA-binding transcriptional regulator YiaG, XRE-type HTH domain	N/A
structural_annotation	UHGV-0100648_45	PF19923,NF009981,COG0355	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0100648	Yes	31,941	51	99	1
UHGV-1486158	No	19,575	52	61	1