vOTU vOTU-084199

vOTU: vOTU-084199

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-084199
Number of genomes	2
Taxonomy (ICTV)
Taxonomy (UHGV)	vFAM-00004 → vSUBFAM-00013 → vGENUS-02675 → vSUBGEN-06315 → vOTU-084199
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium
Host range breadth	Genus
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0032073
Biosample ID	N/A
Genome length (bp)	41,805 bps
CheckV completeness	99.29% (High-quality)
CDS count	65
CDS density	89.85%
tRNA count	2
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium	Total connections	338	Host agreement	96.75
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 99.29)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0032073_1	phrog_27197	78.7	7e-23	N/A	unknown function
eggNOG-mapper	UHGV-0032073_1	445970.ALIPUT_01221	52.0	0.00000296	DNA-templated transcription, initiation	N/A
COG	UHGV-0032073_1	COG1595	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	N/A
structural_annotation	UHGV-0032073_1	NF007410	N/A	N/A	N/A	N/A
PHROG	UHGV-0032073_3	phrog_4652	86.8	3.8e-26	N/A	unknown function
eggNOG-mapper	UHGV-0032073_3	397290.C810_01459	146.0	5.01001e-40	N/A	N/A
structural_annotation	UHGV-0032073_4	PF10743,NF033787	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0032073_6	PF07870,COG3461	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0032073_8	PF14120	N/A	N/A	N/A	N/A
PHROG	UHGV-0032073_10	phrog_561	108.3	8.7e-32	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0032073_10	UniRef90_A0A1G8PW75	141.0	1.5e-37	RecT family protein	N/A
eggNOG-mapper	UHGV-0032073_10	563192.HMPREF0179_00147	153.0	3.15012e-42	N/A	N/A
structural_annotation	UHGV-0032073_10	PF03837,NF007351,COG3723	N/A	N/A	N/A	N/A
KOfam	UHGV-0032073_11	K03111	142.4	4.49957e-42	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0032073_11	phrog_44	143.2	1.3999e-42	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0032073_11	UniRef90_A0A844DI52	259.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0032073_11	718252.FP2_06770	218.0	0	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	N/A
Pfam	UHGV-0032073_11	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0032073_11	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0032073_11	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0032073_11	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0032073_11	PF00436,MF_00984,NF005579,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0032073_12	phrog_5968	76.9	2.2e-22	replisome organizer	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0032073_12	UniRef90_UPI001C02E649	377.0	0	DnaD domain protein	N/A
eggNOG-mapper	UHGV-0032073_12	718252.FP2_01000	184.0	0	N/A	N/A
Pfam	UHGV-0032073_12	PF07261	N/A	N/A	Replication initiation and membrane attachment	DnaB_2
NCBIFam	UHGV-0032073_12	TIGR01446.1	N/A	N/A	DnaD domain protein	N/A
COG	UHGV-0032073_12	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0032073_12	PF09681,MF_01819,TIGR01714,TIGR01446,COG3935	N/A	N/A	N/A	N/A
PHROG	UHGV-0032073_14	phrog_757	51.3	0.000000000000018	DNA methyltransferase	other
UniRef90	UHGV-0032073_14	UniRef90_A0A7J2R6L5	68.9	0.0000000000000216	DNA cytosine methyltransferase (Fragment)	N/A
eggNOG-mapper	UHGV-0032073_14	748224.HMPREF9436_03069	104.0	2.44e-27	DNA (cytosine-5-)-methyltransferase activity	N/A
COG	UHGV-0032073_14	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
PHROG	UHGV-0032073_15	phrog_3136	112.8	9.9e-34	N/A	unknown function
UniRef90	UHGV-0032073_15	UniRef90_A0A6N7TMC2	160.0	0	ASCH domain-containing protein	N/A
eggNOG-mapper	UHGV-0032073_15	394503.Ccel_3165	51.2	0.00000927	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome	N/A
COG	UHGV-0032073_15	COG4933	N/A	N/A	Predicted transcriptional regulator, contains an HTH and PUA-like domains	N/A
structural_annotation	UHGV-0032073_15	PF04266,MF_00684,NF008917,COG4933	N/A	N/A	N/A	N/A
KOfam	UHGV-0032073_16	K01160	61.5	2.4e-17	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-0032073_16	phrog_34	59.3	7.2e-17	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0032073_16	UniRef90_A0A844DBG8	243.0	0	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-0032073_16	875454.BAEW01000002_gene491	135.0	1.32e-39	Endodeoxyribonuclease RusA	N/A
Pfam	UHGV-0032073_16	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-0032073_16	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-0032073_16	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
UniRef90	UHGV-0032073_17	UniRef90_A0A845R8R0	100.0	8.97e-25	N/A	N/A
PHROG	UHGV-0032073_18	phrog_36	42.7	0.0000000000099	transcriptional regulator	transcription regulation
UniRef90	UHGV-0032073_18	UniRef90_A0A6N7TNN9	57.8	0.000000161	N/A	N/A
structural_annotation	UHGV-0032073_18	PF07374,MF_00245,TIGR01636,COG2739	N/A	N/A	N/A	N/A
KOfam	UHGV-0032073_19	K06909	368.8	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0032073_19	phrog_3717	159.9	0	terminase large subunit	head and packaging
UniRef90	UHGV-0032073_19	UniRef90_A0A416S378	491.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0032073_19	665956.HMPREF1032_02957	445.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-0032073_19	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-0032073_19	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-0032073_19	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0032073_19	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0032073_19	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0032073_20	phrog_64	115.7	1.7e-34	portal protein	head and packaging
UniRef90	UHGV-0032073_20	UniRef90_A0A6N7TNT3	478.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0032073_20	673376.F2VHW1_9CAUD	155.0	1.74e-39	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0032073_20	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0032073_20	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
PHROG	UHGV-0032073_21	phrog_2468	80.7	8.5e-24	head morphogenesis	head and packaging
UniRef90	UHGV-0032073_21	UniRef90_A0A844DBI4	611.0	0	Phage_Mu_F domain-containing protein	N/A
eggNOG-mapper	UHGV-0032073_21	1504822.CCNO01000013_gene286	128.0	5.65e-30	cell adhesion	N/A
Pfam	UHGV-0032073_21	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
COG	UHGV-0032073_21	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0032073_21	PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-0032073_22	phrog_5	53.1	0.0000000000000078	tail completion or Neck1 protein	connector
UniRef90	UHGV-0032073_22	UniRef90_A0A844DDB3	289.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0032073_22	1123309.AQYB01000018_gene814	94.4	9.95e-23	Bacteriophage HK97-gp10, putative tail-component	N/A
Pfam	UHGV-0032073_22	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-0032073_22	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0032073_24	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-0032073_25	phrog_544	142.2	3.59994e-42	major head protein	head and packaging
UniRef90	UHGV-0032073_25	UniRef90_R0BKA1	435.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0032073_25	476272.RUMHYD_01776	322.0	0	N/A	N/A
structural_annotation	UHGV-0032073_25	PF03864,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
PHROG	UHGV-0032073_27	phrog_17977	45.5	0.00000000000097	N/A	unknown function
UniRef90	UHGV-0032073_27	UniRef90_A0A844DHJ8	236.0	0	Phage head closure protein	N/A
NCBIFam	UHGV-0032073_27	TIGR01563.1	N/A	N/A	phage head closure protein	N/A
structural_annotation	UHGV-0032073_27	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0032073_28	PF13554	N/A	N/A	N/A	N/A
PHROG	UHGV-0032073_29	phrog_885	62.6	4.9e-18	major tail protein	tail
UniRef90	UHGV-0032073_29	UniRef90_A0A843J9F0	120.0	3.22e-30	Ig-like domain-containing protein	N/A
eggNOG-mapper	UHGV-0032073_29	457396.CSBG_01054	56.2	0.000000628	Chitobiase/beta-hexosaminidase C-terminal domain	N/A
COG	UHGV-0032073_29	COG2273	N/A	N/A	Beta-glucanase, GH16 family	N/A
structural_annotation	UHGV-0032073_29	PF06488,TIGR01603,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0032073_32	phrog_28775	137.3	7.00005e-41	tail length tape measure protein	tail
UniRef90	UHGV-0032073_32	UniRef90_A0A844DDD5	817.0	0	Tape measure protein	N/A
eggNOG-mapper	UHGV-0032073_32	585199.HMPREF0577_0480	124.0	3e-26	tape measure	N/A
Pfam	UHGV-0032073_32	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-0032073_32	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-0032073_32	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-0032073_32	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
UniRef90	UHGV-0032073_33	UniRef90_R6QN45	89.0	1.01e-17	Putative phage tail component domain protein	N/A
eggNOG-mapper	UHGV-0032073_33	411490.ANACAC_00709	81.3	0.00000000000000125	phage tail	N/A
COG	UHGV-0032073_33	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0032073_33	PF05709,PF02408,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0032073_34	phrog_3558	196.2	0	tail protein	tail
UniRef90	UHGV-0032073_34	UniRef90_A0A3E2U3C8	167.0	3.96007e-41	Prophage_tail domain-containing protein	N/A
eggNOG-mapper	UHGV-0032073_34	1235799.C818_04233	96.7	1.86e-18	Prophage endopeptidase tail	N/A
Pfam	UHGV-0032073_34	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
COG	UHGV-0032073_34	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0032073_34	PF14594,TIGR01665,COG4379	N/A	N/A	N/A	N/A
KOfam	UHGV-0032073_36	K07273	154.9	0	acm; lysozyme	N/A
PHROG	UHGV-0032073_36	phrog_291	110.4	1.8e-32	endolysin	lysis
UniRef90	UHGV-0032073_36	UniRef90_A0A564U0D3	397.0	0	Autolytic lysozyme	N/A
eggNOG-mapper	UHGV-0032073_36	718252.FP2_04890	242.0	0	hydrolase, family 25	N/A
Pfam	UHGV-0032073_36	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-0032073_36	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-0032073_36	PF01183,TIGR04053,COG3757	N/A	N/A	N/A	N/A
PHROG	UHGV-0032073_38	phrog_15303	78.8	5.7e-23	N/A	unknown function
structural_annotation	UHGV-0032073_40	PF07374,MF_00245,NF001072,COG2739	N/A	N/A	N/A	N/A
UniRef90	UHGV-0032073_41	UniRef90_A0A7X2P872	64.7	0.000000000127	Ribbon-helix-helix protein, CopG family	N/A
eggNOG-mapper	UHGV-0032073_41	1033733.CAEK01000007_gene1628	85.1	2.65e-19	N/A	N/A
Pfam	UHGV-0032073_41	PF01402	N/A	N/A	Ribbon-helix-helix protein, copG family	RHH_1
structural_annotation	UHGV-0032073_41	PF16734,PF01402	N/A	N/A	N/A	N/A
PHROG	UHGV-0032073_42	phrog_374	56.9	5.3e-16	HNH endonuclease	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0032073_42	927704.SELR_12480	68.2	0.00000000151	N/A	N/A
PHROG	UHGV-0032073_45	phrog_3754	96.3	2.5e-28	N/A	unknown function
eggNOG-mapper	UHGV-0032073_45	1485543.JMME01000025_gene2462	108.0	4.2e-29	N/A	N/A
PHROG	UHGV-0032073_46	phrog_21718	113.1	2e-33	N/A	unknown function
eggNOG-mapper	UHGV-0032073_46	397290.C810_05210	77.4	8.32e-16	N/A	N/A
PHROG	UHGV-0032073_47	phrog_22984	80.7	1e-23	N/A	unknown function
PHROG	UHGV-0032073_48	phrog_16490	150.2	1.12104e-44	N/A	unknown function
eggNOG-mapper	UHGV-0032073_48	1408437.JNJN01000043_gene803	139.0	1.4e-37	N/A	N/A
PHROG	UHGV-0032073_50	phrog_20016	206.7	0	N/A	unknown function
UniRef90	UHGV-0032073_50	UniRef90_A0A285PT46	203.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-0032073_50	1226322.HMPREF1545_00077	187.0	0	N/A	N/A
structural_annotation	UHGV-0032073_50	PF18573,NF033147	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0032073_51	476272.RUMHYD_01772	55.8	0.0000000948	N/A	N/A
structural_annotation	UHGV-0032073_51	PF12510	N/A	N/A	N/A	N/A
KOfam	UHGV-0032073_53	K14059	152.5	4.2039e-45	int; integrase	N/A
PHROG	UHGV-0032073_53	phrog_1	170.6	0	integrase	integration and excision
UniRef90	UHGV-0032073_53	UniRef90_A0A6N7TNQ4	675.0	0	Tyrosine-type recombinase/integrase	N/A
eggNOG-mapper	UHGV-0032073_53	411471.SUBVAR_05137	252.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0032073_53	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0032073_53	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-0032073_53	PF00589,MF_01808,NF007246,COG4974	N/A	N/A	N/A	N/A
KOfam	UHGV-0032073_54	K15773	46.7	0.00000000000061	hipB; HTH-type transcriptional regulator / antitoxin HipB	N/A
PHROG	UHGV-0032073_54	phrog_2328	45.7	0.00000000000041	transcriptional repressor	transcription regulation
UniRef90	UHGV-0032073_54	UniRef90_UPI0018CC79B4	321.0	0	helix-turn-helix domain-containing protein	N/A
Pfam	UHGV-0032073_54	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0032073_54	PF13560,MF_00535,NF041951,COG1396	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0032073_57	1472418.BBJC01000008_gene2695	119.0	6.65e-28	N/A	N/A
structural_annotation	UHGV-0032073_57	COG5342	N/A	N/A	N/A	N/A
KOfam	UHGV-0032073_59	K22300	62.2	1.1e-17	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0032073_59	phrog_2967	45.6	0.000000000001	transcriptional regulator	transcription regulation
UniRef90	UHGV-0032073_59	UniRef90_A0A844DFR0	244.0	0	Helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0032073_59	748224.HMPREF9436_01444	171.0	0	N/A	N/A
Pfam	UHGV-0032073_59	PF12844	N/A	N/A	Helix-turn-helix domain	HTH_19
COG	UHGV-0032073_59	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0032073_59	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0032073_64	K07741	100.0	5.4e-29	antB; anti-repressor protein	N/A
PHROG	UHGV-0032073_64	phrog_63	203.3	0	anti-repressor Ant	transcription regulation
UniRef90	UHGV-0032073_64	UniRef90_A0A844D5R9	443.0	0	Phage regulatory protein/antirepressor Ant	N/A
eggNOG-mapper	UHGV-0032073_64	1423816.BACQ01000027_gene970	229.0	0	Phage regulatory protein Rha (Phage_pRha)	N/A
Pfam	UHGV-0032073_64	PF09669	N/A	N/A	Phage regulatory protein Rha (Phage_pRha)	Phage_pRha
Pfam	UHGV-0032073_64	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
NCBIFam	UHGV-0032073_64	TIGR02681.1	N/A	N/A	phage regulatory protein, Rha family	N/A
COG	UHGV-0032073_64	COG3645	N/A	N/A	Phage antirepressor protein YoqD, KilAC domain	N/A
structural_annotation	UHGV-0032073_64	PF03374,PF09669,TIGR02681,COG3645,COG3561	N/A	N/A	N/A	N/A
KOfam	UHGV-0032073_65	K24213	46.7	0.00000000000037	C1QTNF9; complement C1q and tumor necrosis factor-related protein 9	N/A
PHROG	UHGV-0032073_65	phrog_4433	180.7	0	N/A	unknown function
eggNOG-mapper	UHGV-0032073_65	187303.BN69_1605	97.1	4.34e-21	regulation of DNA-templated transcription, elongation	N/A
Pfam	UHGV-0032073_65	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
COG	UHGV-0032073_65	COG5164	N/A	N/A	Transcription elongation factor SPT5	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0032073	Yes	41,805	53	99	1
UHGV-0032483	No	22,516	55	54	1